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2024-05-04 07:04:52, GGRNA.v2 : RefSeq release 222 (Jan, 2024)

LOCUS       NR_029384                743 bp    RNA     linear   ROD 04-AUG-2023
DEFINITION  Mus musculus orthodenticle homeobox 2 opposite strand 1 (Otx2os1),
            long non-coding RNA.
ACCESSION   NR_029384
VERSION     NR_029384.1
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 743)
  AUTHORS   Harrow JL, Steward CA, Frankish A, Gilbert JG, Gonzalez JM,
            Loveland JE, Mudge J, Sheppard D, Thomas M, Trevanion S and Wilming
            LG.
  TITLE     The Vertebrate Genome Annotation browser 10 years on
  JOURNAL   Nucleic Acids Res 42 (Database issue), D771-D779 (2014)
   PUBMED   24316575
REFERENCE   2  (bases 1 to 743)
  AUTHORS   Alfano G, Vitiello C, Caccioppoli C, Caramico T, Carola A, Szego
            MJ, McInnes RR, Auricchio A and Banfi S.
  TITLE     Natural antisense transcripts associated with genes involved in eye
            development
  JOURNAL   Hum Mol Genet 14 (7), 913-923 (2005)
   PUBMED   15703187
COMMENT     PREDICTED REFSEQ: This record has not been reviewed and the
            function is unknown. The reference sequence was derived from
            AK042665.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK042665.1 [ECO:0000332]
            RNAseq introns              :: partial sample support SAMN01164138,
                                           SAMN01164141 [ECO:0000350]
            ##Evidence-Data-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-743               AK042665.1         1-743
FEATURES             Location/Qualifiers
     source          1..743
                     /organism="Mus musculus"
                     /mol_type="transcribed RNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="14"
                     /map="14 25.36 cM"
     gene            1..743
                     /gene="Otx2os1"
                     /note="orthodenticle homeobox 2 opposite strand 1"
                     /db_xref="GeneID:606497"
                     /db_xref="MGI:MGI:3583292"
     ncRNA           1..743
                     /ncRNA_class="lncRNA"
                     /gene="Otx2os1"
                     /product="orthodenticle homeobox 2 opposite strand 1"
                     /db_xref="GeneID:606497"
                     /db_xref="MGI:MGI:3583292"
     exon            1..109
                     /gene="Otx2os1"
                     /inference="alignment:Splign:2.1.0"
     exon            110..265
                     /gene="Otx2os1"
                     /inference="alignment:Splign:2.1.0"
     exon            266..362
                     /gene="Otx2os1"
                     /inference="alignment:Splign:2.1.0"
     exon            363..526
                     /gene="Otx2os1"
                     /inference="alignment:Splign:2.1.0"
     exon            527..743
                     /gene="Otx2os1"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
agttgtcccgcgtggcccgggctgtgggaagcaggtcctggctcttggtccgagccatcgtgctttgtatgatggaaaggcaaatccacgcgaatctcttgaaaaagagaggaattctgcccagactctccagcagttggtagcaggcaagctttctcctgtgtcgcctggaaaagttgcaaaattgctcttcacctgtaagaacatgcattttatcttccagtctcttcttgtcaatttggaaattgcagacaccccggctcaggagaaatggctctgtgcattggttttcctggctgaccctgagaataagcaactctgtccgcttgttgtctgaagttgtttgaagatgattagaggagaaataacaccaaagccctgagcaatgctttgcagacgtctaggggctcaggatgtgtgatgtagcccagttctatttgttgacatccagcttttgaaagcatcagcctttgagagtggaacaatattggagctatggagtcacctttacctggaaatatcgaagggtcatgaacttgtcgtcgtcgtcatcatcattgtcatcgtcatcatcatcaccatcaccaccagcagcagcagcagcagcagcagcagcagcaagattttgtgttgggaaggtacttccaaatgctacaggggacagaaggtcatcagctattggcccagggattatagcatggaagagttcctcttctcagaggatattaaactttttgaggatt
//

by @meso_cacase at DBCLS
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If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596. [Full Text]