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2024-05-04 07:29:00, GGRNA.v2 : RefSeq release 222 (Jan, 2024)

LOCUS       NR_004444               2487 bp    RNA     linear   ROD 04-AUG-2023
DEFINITION  Mus musculus zinc finger homeobox 2, opposite strand (Zfhx2os),
            antisense RNA.
ACCESSION   NR_004444
VERSION     NR_004444.2
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 2487)
  AUTHORS   Komine Y, Takao K, Miyakawa T and Yamamori T.
  TITLE     Behavioral abnormalities observed in Zfhx2-deficient mice
  JOURNAL   PLoS One 7 (12), e53114 (2012)
   PUBMED   23300874
REFERENCE   2  (bases 1 to 2487)
  AUTHORS   Komine Y, Nakamura K, Katsuki M and Yamamori T.
  TITLE     Novel transcription factor zfh-5 is negatively regulated by its own
            antisense RNA in mouse brain
  JOURNAL   Mol Cell Neurosci 31 (2), 273-283 (2006)
   PUBMED   16257534
  REMARK    GeneRIF: Results report features of zfh-5 isolated from the mouse
            brain; in addition to the mRNA, the antisense strand of zfh-5 is
            also expressed in the developing brain, in a manner complementary
            to the expression of zfh-5 mRNA.
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AK032589.1.
            
            On Jul 3, 2012 this sequence version replaced NR_004444.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK032589.1, SRR7345562.2860410.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849374, SAMN00849381
                                           [ECO:0000348]
            ##Evidence-Data-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-2487              AK032589.1         1-2487
FEATURES             Location/Qualifiers
     source          1..2487
                     /organism="Mus musculus"
                     /mol_type="transcribed RNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="14"
                     /map="14 28.06 cM"
     gene            1..2487
                     /gene="Zfhx2os"
                     /gene_synonym="Zfhx2as"
                     /note="zinc finger homeobox 2, opposite strand"
                     /db_xref="GeneID:432855"
                     /db_xref="MGI:MGI:3620246"
     ncRNA           1..2487
                     /ncRNA_class="antisense_RNA"
                     /gene="Zfhx2os"
                     /gene_synonym="Zfhx2as"
                     /product="zinc finger homeobox 2, opposite strand"
                     /db_xref="GeneID:432855"
                     /db_xref="MGI:MGI:3620246"
     exon            1..1273
                     /gene="Zfhx2os"
                     /gene_synonym="Zfhx2as"
                     /inference="alignment:Splign:2.1.0"
     exon            1274..2487
                     /gene="Zfhx2os"
                     /gene_synonym="Zfhx2as"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
agaaatgagcggggcacttaggataagctgtgtttacctaagtggggagatgacctttgggagaaggcagggaatacaattggacttgggtacgaagtggcaggagcagagaggggacttaccagctgtggggaacttgcgggcaggcgctccaaggtggtggaaaccatttaggagtagctgggcttcaaggggcttgtctggcctcagcccgggcccaggcatgggtgtctgaggctgtcctagggcctggggcccaaagtactggaagagttcaggagggttggtgggggcagcccctggtgggggaggaggtcctggccccaccagccctggtggcaggccaagtggcagcccctggtgcaacatcaggacgttctgcatgtgtttctcagaagtcatgtggatgcgcaggtttcgggagatgttggtttcgtagctgcacactttgcactgccaggatgacttggtcttgggctctttatccccgacagaggtgggtgggagggatgcctccgggggactcgcctgcccgccaggccctgcctggaagccctgcaggttggccaggtgcttgtcggactgcatgtggatgctgaggttgcctttggtggtggtggagtagttgcagacatcgcagcggtagggcttgtagccgcagttgtagctctctccgcgggccaggcgggggtgggcgcccccggcgctacagtagctgcagtggctgttgctctcggggtgcttctcccgcatgtgcacgtccagggtctgctggtacttgtagtgccagttgcacttgggacacttgagagtcttgcaggaattgcgtgagtgtagcagggacatgtgactggacaggctgaggccctggaaggcggcaggggctggagtgtagtcatcggccaggcgacaggacggaggtgggtcactggtatcttcgggagagcctgctggagctgggagcacggccacctccttagaggtgggtgagctttggttgagcgggaggcagagccctccatcctcttcctgcccctcagggaaccagtctggccccgcctcgcctcttggtactggcgaatctttggcttgggttgggctggggtcccaggtggctagggctgtgggtggggatggtgggctgagggctataacctcttcagcggggagaacaagggcttgaccatctgcctctggggggccgtcctcagcctgggctccatttgtcttcacagtcactgtgctggtgtccggtacttcgggagaaggacgggcagccagagacggcgctgaggtatcgtgggacaacatttggtcagaagagctaaagccttggattgggtcgaagccatgttggatgtgaagggtggtaaggtgtgaggaggggaagtgggtgaggaggggcaggctgggctcttccttggcgcttgcctcatcccaggggaagccctttggtaacgagagttcactgcccctaggcaggggcaggttggccagtaggtaggcctggcctccagctgcgaagaataagtggctgctgaggtccaaaggaaggatctcttcctcctcctttgccaccccaaggtcctttggtgggatgtggccacagccaggctcttcttggggctctccaatctcctttggtgggtcaaggtcactgcctgactccagacgctctccccccggctctgaggaccttatgctctcagaggtggagggggcatcagggggatctttggtgacaggatcagaggtgctggaggaggaggtctctggaggtggtgaccgaacattgtgcccaggggaaggaacggttccggagggagaggctgagttaagggtagccatggtagacggaggactgctgagggttcatttcagcgtgacagccagtaccctgcatggaggcatggggagagcagtgccgtaagatctcggggtccccagcaaggctgaatgtctggactctttagccctactatgctcagactcaggtgcccccatgccaacttgaagctctacttagtgtgtctaaaaccagagttcacgatcgctttccaaaccagctcttctccatcttgcaatctcaaatgtggtaccactcaaccctcggcttatatgtctatgctatgccctgtagcttccattccataaccagttccaggatgcatcagaccctacactcacatcttcctcaccagcagcaccctggtcggacccactggtatctttttgagctgatgcaccagatgggatactcttttccttcccacctctgccctctccaagctgacagccaaaacaaccccttcatgttcaactacagaaaatgcccaacatgtgtagggagaacctctgtctgctgcccgctgtcagtggcaatcagcgcatgggcggtctcgtcttcgtttgtgccctcaccaaaactgctttactccccgcggtgttttaattttaggttagaattaaatataaattttaggttac
//

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If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596. [Full Text]