2024-04-27 04:00:00, GGRNA.v2 : RefSeq release 222 (Jan, 2024)
LOCUS NM_207248 2022 bp mRNA linear ROD 04-AUG-2023 DEFINITION Mus musculus RIKEN cDNA 4930433I11 gene (4930433I11Rik), mRNA. ACCESSION NM_207248 XM_145538 VERSION NM_207248.3 KEYWORDS RefSeq; RefSeq Select. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 2022) AUTHORS Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, Magen A, Canidio E, Pagani M, Peluso I, Lin-Marq N, Koch M, Bilio M, Cantiello I, Verde R, De Masi C, Bianchi SA, Cicchini J, Perroud E, Mehmeti S, Dagand E, Schrinner S, Nurnberger A, Schmidt K, Metz K, Zwingmann C, Brieske N, Springer C, Hernandez AM, Herzog S, Grabbe F, Sieverding C, Fischer B, Schrader K, Brockmeyer M, Dettmer S, Helbig C, Alunni V, Battaini MA, Mura C, Henrichsen CN, Garcia-Lopez R, Echevarria D, Puelles E, Garcia-Calero E, Kruse S, Uhr M, Kauck C, Feng G, Milyaev N, Ong CK, Kumar L, Lam M, Semple CA, Gyenesei A, Mundlos S, Radelof U, Lehrach H, Sarmientos P, Reymond A, Davidson DR, Dolle P, Antonarakis SE, Yaspo ML, Martinez S, Baldock RA, Eichele G and Ballabio A. TITLE A high-resolution anatomical atlas of the transcriptome in the mouse embryo JOURNAL PLoS Biol 9 (1), e1000582 (2011) PUBMED 21267068 REMARK Publication Status: Online-Only COMMENT VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from BC150916.1. On Nov 18, 2009 this sequence version replaced NM_207248.2. ##Evidence-Data-START## Transcript exon combination :: BC150916.1, AK029662.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN00849384 [ECO:0000348] ##Evidence-Data-END## ##RefSeq-Attributes-START## RefSeq Select criteria :: based on single protein-coding transcript ##RefSeq-Attributes-END## PRIMARY REFSEQ_SPAN PRIMARY_IDENTIFIER PRIMARY_SPAN COMP 1-2022 BC150916.1 1-2022 FEATURES Location/Qualifiers source 1..2022 /organism="Mus musculus" /mol_type="mRNA" /db_xref="taxon:10090" /chromosome="7" /map="7 27.95 cM" gene 1..2022 /gene="4930433I11Rik" /gene_synonym="Gm481" /note="RIKEN cDNA 4930433I11 gene" /db_xref="GeneID:243944" /db_xref="MGI:MGI:2685327" exon 1..104 /gene="4930433I11Rik" /gene_synonym="Gm481" /inference="alignment:Splign:2.1.0" misc_feature 56..58 /gene="4930433I11Rik" /gene_synonym="Gm481" /note="upstream in-frame stop codon" CDS 98..1996 /gene="4930433I11Rik" /gene_synonym="Gm481" /codon_start=1 /product="uncharacterized protein LOC243944" /protein_id="NP_997131.2" /db_xref="CCDS:CCDS52207.1" /db_xref="GeneID:243944" /db_xref="MGI:MGI:2685327" /translation="
MSVVEMDTSLGLSPSSQTLCLLQSPEFYITCTPVSQRKTPSVDGDGPLTTSIPSHSEFLALPPAPSAEQTEIKNMHEMEVEHLMPRDAYKGTKENQDPSFLPLSHPDLQQPLHCIDTGNLRQTSASDNDSLGGIHLGLEEKGTLDSLKVSTIDFPDITTLVADIHLPQLFKFLTGLDQYQDSTVTESKDSTVVWRDQAQENSRVISGSSDQVKKKDHDTSELIDGAPHAKIPNWDLVVGEGSMASVGVSGRAIDNMAKDLEGKAPKVSPIMPSRARGQGQDKTKWTTENNSKKIEELKKSRNRAKAEKKPTIPKTKIKRDLPELSHSSFKKPRTHLGMHMLESVQVFHPLGKKSEKKPATTSSQHLGTSSSNKYPGPGPATTVLQDMAHECQGPDETPGKVQRAESSALKECPSQSQYEVPPAGKVRLVPLPFPTQDQPQTRPVSRKPLNLASHRPTTAYSERCHFHSAQLTTLKPSQPPSISKSLMASAKPALPISSSAMRSNVTNIIHISTVPQSGTLRPTSYREPSQTSLQRELLSAAKNNVPAPLEPQTQYLLQDFSRQPIPWRKVDILGPVVSQPITKEQRPEREAMKRRAQQERENAAKYTSPGKLQLFLQREKDMEISRYYGYAM"
misc_feature 719..1159 /gene="4930433I11Rik" /gene_synonym="Gm481" /note="Domain of unknown function (DUF4629); Region: DUF4629; pfam15442" /db_xref="CDD:434721" exon 105..2022 /gene="4930433I11Rik" /gene_synonym="Gm481" /inference="alignment:Splign:2.1.0" ORIGIN
agaggggccagtttggtgagatcagtcaaggacaaccatttattctgctccattgtaacgtggattactgctattccctcccaccattgccttgacaatgtcagtggtggaaatggatacatccctgggattgtcaccttcaagccaaacactttgtctgctgcagagtccagaattctacatcacttgcaccccggtttcccagaggaagacaccatctgttgatggggacgggccattaacaacctctatccctagccattcagaattcctcgccttgcctccagctccaagtgctgaacaaacagagattaaaaacatgcatgagatggaagttgagcacttgatgcctcgggatgcctataagggtactaaagaaaaccaagacccatcattccttcctttatcacaccctgacttgcagcagcctctgcactgcattgacactggaaacctaagacagacgtctgcttctgacaatgacagcttggggggcatccacctgggtctggaagagaaaggaacactggacagtttgaaggtgtccactattgactttccagatatcactacattggtggcagatattcaccttcctcaactcttcaaattcctcacaggcctagatcaataccaagattcaacagtaactgaatctaaagactccacagttgtctggagggatcaggcccaagaaaactccagagtcatcagtgggtcctctgaccaggtgaaaaagaaagaccatgacacctctgagttgattgatggagctcctcatgccaaaatcccaaactgggatctggtggtgggagaagggtctatggccagtgttggggtcagtggcagggctattgacaacatggctaaggacttggaggggaaagctcccaaagtgtcacccatcatgcccagcagagctaggggacaagggcaagacaagaccaaatggaccacagaaaataattccaagaaaatagaggagctcaagaagtcaaggaacagagccaaagctgaaaagaagcccaccatccccaagaccaagataaagagggatctacctgagcttagccacagcagctttaaaaagcctagaacccaccttggcatgcacatgctggagtctgtgcaggtcttccatcctctggggaagaagagtgagaagaaacctgctaccacttcttcccagcatctgggaacttctagcagcaacaaatatcccgggccaggcccagccacaacagtactacaggatatggctcatgagtgccagggccctgacgaaactccaggcaaggttcagagagcagagagcagtgctctcaaggagtgtccatctcagtctcagtatgaggtgcccccagctgggaaggtcaggttagtacctctgcctttcccaacccaggaccagcctcaaaccagacctgtttctagaaagcccctcaatctggcttcacacaggcccactacagcttactctgagaggtgtcattttcactcagctcagcttaccacactcaagccatcccaaccaccttctatcagcaaatctttgatggcttctgccaagccagctctgccaatttcttccagtgccatgcgatctaatgtaaccaacatcatccacattagcactgtgcctcaatcaggcaccttgaggcctacatcctatagagagccatctcagacttccctccagagggagcttctttctgctgccaagaacaacgtgccagcacctcttgaacctcaaactcaatatctgttgcaagacttcagccgccaacccattccatggagaaaagttgacattctgggaccagttgtctcacagcccatcacaaaagagcagaggccagagagggaggccatgaagaggagggcccaacaggagcgagagaatgctgccaagtacacctctcctgggaaactgcagctttttctccagagggagaaagatatggaaatttcccgatactatggctatgcaatgtaagagctgcccagatatttcagtgtgga
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Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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