2024-11-01 08:44:17, GGRNA.v2 : RefSeq release 226 (Sep, 2024)
LOCUS NM_153402 7635 bp mRNA linear ROD 30-APR-2024 DEFINITION Mus musculus argonaute RISC catalytic subunit 3 (Ago3), mRNA. ACCESSION NM_153402 VERSION NM_153402.2 KEYWORDS RefSeq; RefSeq Select. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 7635) AUTHORS Adams,D.J., Barlas,B., McIntyre,R.E., Salguero,I., van der Weyden,L., Barros,A., Vicente,J.R., Karimpour,N., Haider,A., Ranzani,M., Turner,G., Thompson,N.A., Harle,V., Olvera-Leon,R., Robles-Espinoza,C.D., Speak,A.O., Geisler,N., Weninger,W.J., Geyer,S.H., Hewinson,J., Karp,N.A., Fu,B., Yang,F., Kozik,Z., Choudhary,J., Yu,L., van Ruiten,M.S., Rowland,B.D., Lelliott,C.J., Del Castillo Velasco-Herrera,M., Verstraten,R., Bruckner,L., Henssen,A.G., Rooimans,M.A., de Lange,J., Mohun,T.J., Arends,M.J., Kentistou,K.A., Coelho,P.A., Zhao,Y., Zecchini,H., Perry,J.R.B., Jackson,S.P. and Balmus,G. CONSRTM Sanger Mouse Genetics Project TITLE Genetic determinants of micronucleus formation in vivo JOURNAL Nature 627 (8002), 130-136 (2024) PUBMED 38355793 REFERENCE 2 (bases 1 to 7635) AUTHORS Guidi,R., Wedeles,C., Xu,D., Kolmus,K., Headland,S.E., Teng,G., Guillory,J., Zeng,Y.J., Cheung,T.K., Chaudhuri,S., Modrusan,Z., Liang,Y., Horswell,S., Haley,B., Rutz,S., Rose,C., Franke,Y., Kirkpatrick,D.S., Hackney,J.A. and Wilson,M.S. TITLE Argonaute3-SF3B3 complex controls pre-mRNA splicing to restrain type 2 immunity JOURNAL Cell Rep 42 (12), 113515 (2023) PUBMED 38096048 REMARK GeneRIF: Argonaute3-SF3B3 complex controls pre-mRNA splicing to restrain type 2 immunity. REFERENCE 3 (bases 1 to 7635) AUTHORS Zhang,Y., Tan,Y.Y., Chen,P.P., Xu,H., Xie,S.J., Xu,S.J., Li,B., Li,J.H., Liu,S., Yang,J.H., Zhou,H. and Qu,L.H. TITLE Genome-wide identification of microRNA targets reveals positive regulation of the Hippo pathway by miR-122 during liver development JOURNAL Cell Death Dis 12 (12), 1161 (2021) PUBMED 34907157 REMARK Publication Status: Online-Only REFERENCE 4 (bases 1 to 7635) AUTHORS Adiliaghdam,F., Basavappa,M., Saunders,T.L., Harjanto,D., Prior,J.T., Cronkite,D.A., Papavasiliou,N. and Jeffrey,K.L. TITLE A Requirement for Argonaute 4 in Mammalian Antiviral Defense JOURNAL Cell Rep 30 (6), 1690-1701 (2020) PUBMED 32049003 REFERENCE 5 (bases 1 to 7635) AUTHORS Ingham,N.J., Pearson,S.A., Vancollie,V.E., Rook,V., Lewis,M.A., Chen,J., Buniello,A., Martelletti,E., Preite,L., Lam,C.C., Weiss,F.D., Powis,Z., Suwannarat,P., Lelliott,C.J., Dawson,S.J., White,J.K. and Steel,K.P. TITLE Mouse screen reveals multiple new genes underlying mouse and human hearing loss JOURNAL PLoS Biol 17 (4), e3000194 (2019) PUBMED 30973865 REMARK Publication Status: Online-Only REFERENCE 6 (bases 1 to 7635) AUTHORS McKee,A.E., Minet,E., Stern,C., Riahi,S., Stiles,C.D. and Silver,P.A. TITLE A genome-wide in situ hybridization map of RNA-binding proteins reveals anatomically restricted expression in the developing mouse brain JOURNAL BMC Dev Biol 5, 14 (2005) PUBMED 16033648 REMARK Publication Status: Online-Only REFERENCE 7 (bases 1 to 7635) AUTHORS Liu,J., Carmell,M.A., Rivas,F.V., Marsden,C.G., Thomson,J.M., Song,J.J., Hammond,S.M., Joshua-Tor,L. and Hannon,G.J. TITLE Argonaute2 is the catalytic engine of mammalian RNAi JOURNAL Science 305 (5689), 1437-1441 (2004) PUBMED 15284456 REFERENCE 8 (bases 1 to 7635) AUTHORS Doi,N., Zenno,S., Ueda,R., Ohki-Hamazaki,H., Ui-Tei,K. and Saigo,K. TITLE Short-interfering-RNA-mediated gene silencing in mammalian cells requires Dicer and eIF2C translation initiation factors JOURNAL Curr Biol 13 (1), 41-46 (2003) PUBMED 12526743 REFERENCE 9 (bases 1 to 7635) AUTHORS Stryke,D., Kawamoto,M., Huang,C.C., Johns,S.J., King,L.A., Harper,C.A., Meng,E.C., Lee,R.E., Yee,A., L'Italien,L., Chuang,P.T., Young,S.G., Skarnes,W.C., Babbitt,P.C. and Ferrin,T.E. TITLE BayGenomics: a resource of insertional mutations in mouse embryonic stem cells JOURNAL Nucleic Acids Res 31 (1), 278-281 (2003) PUBMED 12520002 REFERENCE 10 (bases 1 to 7635) AUTHORS Carmell,M.A., Xuan,Z., Zhang,M.Q. and Hannon,G.J. TITLE The Argonaute family: tentacles that reach into RNAi, developmental control, stem cell maintenance, and tumorigenesis JOURNAL Genes Dev 16 (21), 2733-2742 (2002) PUBMED 12414724 REMARK Review article COMMENT VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from BY235425.1, AK083652.1 and AL606976.25. On Jun 18, 2009 this sequence version replaced NM_153402.1. Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications. ##Evidence-Data-START## Transcript exon combination :: AK154436.1, AK035042.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMN00849374, SAMN00849375 [ECO:0006172] ##Evidence-Data-END## ##RefSeq-Attributes-START## RefSeq Select criteria :: based on conservation, expression, longest protein ##RefSeq-Attributes-END## PRIMARY REFSEQ_SPAN PRIMARY_IDENTIFIER PRIMARY_SPAN COMP 1-34 BY235425.1 15-48 35-2536 AK083652.1 2-2503 2537-3159 AK083652.1 2505-3127 3160-7635 AL606976.25 57596-62071 c FEATURES Location/Qualifiers source 1..7635 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6" /db_xref="taxon:10090" /chromosome="4" /map="4 60.39 cM" gene 1..7635 /gene="Ago3" /gene_synonym="C130014L07Rik; Eif2c3" /note="argonaute RISC catalytic subunit 3" /db_xref="GeneID:214150" /db_xref="MGI:MGI:2446634" exon 1..275 /gene="Ago3" /gene_synonym="C130014L07Rik; Eif2c3" /inference="alignment:Splign:2.1.0" misc_feature 254..256 /gene="Ago3" /gene_synonym="C130014L07Rik; Eif2c3" /note="upstream in-frame stop codon" CDS 257..2839 /gene="Ago3" /gene_synonym="C130014L07Rik; Eif2c3" /EC_number="3.1.26.n2" /note="argonaute 3; eukaryotic translation initiation factor 2C, 3; argonaute RISC catalytic component 3; Piwi/Argonaute family protein meIF2C3; mAgo3; eIF2C 3; eIF-2C 3; argonaute3" /codon_start=1 /product="protein argonaute-3" /protein_id="NP_700451.2" /db_xref="CCDS:CCDS18652.1" /db_xref="GeneID:214150" /db_xref="MGI:MGI:2446634" /translation="
MEIGSAGPIGAQPLFIVPRRPGYGTMGKPIKLLANCFQVEIPKIDVYLYEVDIKPDKCPRRVNREVVDSMVQHFKVTIFGDRRPVYDGKRSLYTANPLPVATTGVDLDVTLPGEGGKDRPFKVSVKFVSRVSWHLLHEALAGGTLPEPLELDKPVSTNPVHAVDVVLRHLPSMKYTPVGRSFFSAPEGYDHPLGGGREVWFGFHQSVRPAMWKMMLNIDVSATAFYKAQPVIQFMCEVLDIHNIDEQPRPLTDSHRVKFTKEIKGLKVEVTHCGTMRRKYRVCNVTRRPASHQTFPLQLENGQTVERTVAQYFREKYTLQLKYPHLPCLQVGQEQKHTYLPLEVCNIVAGQRCIKKLTDNQTSTMIKATARSAPDRQEEISRLVRSANYETDPFVQEFQFKVRDEMAHVTGRVLPAPMLQYGGRNRTVATPSHGVWDMRGKQFHTGVEIKMWAIACFATQRQCREEILKGFTDQLRKISKDAGMPIQGQPCFCKYAQGADSVEPMFRHLKNTYSGLQLIIVILPGKTPVYAEVKRVGDTLLGMATQCVQVKNVIKTSPQTLSNLCLKINVKLGGINNILVPHQRPSVFQQPVIFLGADVTHPPAGDGKKPSIAAVVGSMDAHPSRYCATVRVQRPRQEIIQDLASMVRELLIQFYKSTRFKPTRIIFYRDGVSEGQFRQVLYYELLAIREACISLEKDYQPGITYIVVQKRHHTRLFCADRTERVGRSGNIPAGTTVDTDITHPYEFDFYLCSHAGIQGTSRPSHYHVLWDDNFFTADELQLLTYQLCHTYVRCTRSVSIPAPAYYAHLVAFRARYHLVDKEHDSAEGSHVSGQSNGRDPQALAKAVQIHQDTLRTMYFA"
misc_feature 257..259 /gene="Ago3" /gene_synonym="C130014L07Rik; Eif2c3" /note="N-acetylmethionine. /evidence=ECO:0000250|UniProtKB:Q9H9G7; propagated from UniProtKB/Swiss-Prot (Q8CJF9.2); acetylation site" misc_feature 473..757 /gene="Ago3" /gene_synonym="C130014L07Rik; Eif2c3" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:465134" misc_feature 785..937 /gene="Ago3" /gene_synonym="C130014L07Rik; Eif2c3" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:462567" misc_feature 938..1300 /gene="Ago3" /gene_synonym="C130014L07Rik; Eif2c3" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212" misc_feature order(1094..1096,1139..1141,1181..1183,1193..1195, 1247..1249,1268..1270,1274..1276) /gene="Ago3" /gene_synonym="C130014L07Rik; Eif2c3" /note="nucleic acid-binding interface [nucleotide binding]; other site" /db_xref="CDD:239212" misc_feature 1433..2710 /gene="Ago3" /gene_synonym="C130014L07Rik; Eif2c3" /note="PIWI domain, Argonaute-like subfamily. Argonaute is the central component of the RNA-induced silencing complex (RISC) and related complexes. The PIWI domain is the C-terminal portion of Argonaute and consists of two subdomains, one of which provides the...; Region: Piwi_ago-like; cd04657" /db_xref="CDD:240015" misc_feature order(1844..1846,1856..1858,1892..1903,1910..1912, 1934..1936,1943..1945,1955..1957,1967..1969) /gene="Ago3" /gene_synonym="C130014L07Rik; Eif2c3" /note="5' RNA guide strand anchoring site [active]" /db_xref="CDD:240015" misc_feature 1844..1957 /gene="Ago3" /gene_synonym="C130014L07Rik; Eif2c3" /note="propagated from UniProtKB/Swiss-Prot (Q8CJF9.2); Region: Interaction with guide RNA. /evidence=ECO:0000250|UniProtKB:Q9H9G7" misc_feature order(2048..2050,2054..2056,2264..2266,2678..2680) /gene="Ago3" /gene_synonym="C130014L07Rik; Eif2c3" /note="active site" /db_xref="CDD:240015" misc_feature 2528..2671 /gene="Ago3" /gene_synonym="C130014L07Rik; Eif2c3" /note="propagated from UniProtKB/Swiss-Prot (Q8CJF9.2); Region: Interaction with guide RNA. /evidence=ECO:0000250|UniProtKB:Q9H9G7" misc_feature 2729..2731 /gene="Ago3" /gene_synonym="C130014L07Rik; Eif2c3" /note="Phosphoserine. /evidence=ECO:0000250|UniProtKB:Q9H9G7; propagated from UniProtKB/Swiss-Prot (Q8CJF9.2); phosphorylation site" exon 276..447 /gene="Ago3" /gene_synonym="C130014L07Rik; Eif2c3" /inference="alignment:Splign:2.1.0" exon 448..568 /gene="Ago3" /gene_synonym="C130014L07Rik; Eif2c3" /inference="alignment:Splign:2.1.0" exon 569..777 /gene="Ago3" /gene_synonym="C130014L07Rik; Eif2c3" /inference="alignment:Splign:2.1.0" exon 778..914 /gene="Ago3" /gene_synonym="C130014L07Rik; Eif2c3" /inference="alignment:Splign:2.1.0" exon 915..1049 /gene="Ago3" /gene_synonym="C130014L07Rik; Eif2c3" /inference="alignment:Splign:2.1.0" exon 1050..1137 /gene="Ago3" /gene_synonym="C130014L07Rik; Eif2c3" /inference="alignment:Splign:2.1.0" exon 1138..1285 /gene="Ago3" /gene_synonym="C130014L07Rik; Eif2c3" /inference="alignment:Splign:2.1.0" exon 1286..1405 /gene="Ago3" /gene_synonym="C130014L07Rik; Eif2c3" /inference="alignment:Splign:2.1.0" exon 1406..1528 /gene="Ago3" /gene_synonym="C130014L07Rik; Eif2c3" /inference="alignment:Splign:2.1.0" exon 1529..1662 /gene="Ago3" /gene_synonym="C130014L07Rik; Eif2c3" /inference="alignment:Splign:2.1.0" exon 1663..1847 /gene="Ago3" /gene_synonym="C130014L07Rik; Eif2c3" /inference="alignment:Splign:2.1.0" exon 1848..2007 /gene="Ago3" /gene_synonym="C130014L07Rik; Eif2c3" /inference="alignment:Splign:2.1.0" exon 2008..2098 /gene="Ago3" /gene_synonym="C130014L07Rik; Eif2c3" /inference="alignment:Splign:2.1.0" exon 2099..2293 /gene="Ago3" /gene_synonym="C130014L07Rik; Eif2c3" /inference="alignment:Splign:2.1.0" exon 2294..2428 /gene="Ago3" /gene_synonym="C130014L07Rik; Eif2c3" /inference="alignment:Splign:2.1.0" exon 2429..2530 /gene="Ago3" /gene_synonym="C130014L07Rik; Eif2c3" /inference="alignment:Splign:2.1.0" exon 2531..2730 /gene="Ago3" /gene_synonym="C130014L07Rik; Eif2c3" /inference="alignment:Splign:2.1.0" exon 2731..7635 /gene="Ago3" /gene_synonym="C130014L07Rik; Eif2c3" /inference="alignment:Splign:2.1.0" polyA_site 3720 /gene="Ago3" /gene_synonym="C130014L07Rik; Eif2c3" /note="major polyA site" regulatory 5540..5545 /regulatory_class="polyA_signal_sequence" /gene="Ago3" /gene_synonym="C130014L07Rik; Eif2c3" /note="hexamer: AATAAA" polyA_site 5558 /gene="Ago3" /gene_synonym="C130014L07Rik; Eif2c3" /note="major polyA site" regulatory 5595..5600 /regulatory_class="polyA_signal_sequence" /gene="Ago3" /gene_synonym="C130014L07Rik; Eif2c3" /note="hexamer: ATTAAA" polyA_site 5616 /gene="Ago3" /gene_synonym="C130014L07Rik; Eif2c3" regulatory 7113..7118 /regulatory_class="polyA_signal_sequence" /gene="Ago3" /gene_synonym="C130014L07Rik; Eif2c3" /note="hexamer: AATAAA" polyA_site 7136 /gene="Ago3" /gene_synonym="C130014L07Rik; Eif2c3" /note="major polyA site" ORIGIN
gaccgggaaaagcgagcggctgcggcggcggggcggctggcgggtcgggaagctgcacgcgtcagcatctgtgggcgacgcaagttccggacctggttccagcgtcctcactcaggactgtcgccgctcttacctcgctgcaggctgtctgtctctcccgactgtgcctcttgtgcccggagctttccgagggcgtccgctcctcgcctctgtggtggcacccttctctcgtgaagcactccccccagctccatgaatggaaatcggctccgcaggacccattggggcccagcccctattcatcgtgcccagaagacctgggtatggcactatgggcaaacccattaaactgttggctaactgttttcaagttgaaatcccaaagattgatgtctacctctatgaagttgacatcaaaccagacaagtgtcctcgaagagtgaacagagaagtagttgattcaatggttcagcattttaaagtgactatatttggagaccgtagaccagtttatgatggaaaaagaagcctttatacagccaatccacttcctgtggcaaccactggggtagatttagatgttacattacctggggaaggtggaaaagatcgacctttcaaggtgtcagtcaaatttgtgtctcgagtcagctggcacctactacatgaagcactggctggagggactttgcctgagccactggaattagacaagcctgtcagcactaaccccgtccatgccgttgacgtggtgctccgacatctgccctctatgaaatatacgcctgtggggcgttcctttttctcagctccagaaggatatgaccaccctctgggagggggcagggaagtatggtttggattccatcagtctgttcggcctgccatgtggaaaatgatgctaaatattgatgtttctgccactgccttttacaaagcacaacctgtaattcagttcatgtgtgaagttcttgacattcacaacattgatgaacaacccagacccctgactgattctcatcgggtaaaattcactaaggagataaaaggtctgaaagttgaagtgactcattgtggaacaatgagacggaaataccgtgtttgtaatgtaacgagaaggcctgccagccaccaaacctttcctttacagctagaaaatggccaaactgtggagaggactgtggctcagtatttcagagaaaagtacacgctgcagctgaagtacccacaccttccctgcctgcaagtggggcaggagcagaagcatacatacctgccactagaagtctgtaatattgtggctgggcaaaggtgtatcaagaaactaacggacaatcagacttctacaatgataaaggcaacagcaagatctgcaccagatagacaagaggaaattagcagattggtaagaagtgcaaattatgaaacagatccatttgttcaggagtttcagtttaaagtgcgggatgaaatggcccatgtgacaggacgtgtacttccagcacctatgctccagtacggaggacggaaccggacagtagccacacccagccacggagtatgggacatgcgaggaaaacagttccacacaggagtcgaaatcaaaatgtgggctattgcttgctttgccacacagaggcagtgcagagaagaaatactaaaaggtttcacagaccagcttcggaagatttccaaggatgcagggatgcccatccagggtcagccatgcttctgcaaatacgcacagggggcagacagcgtggagcccatgttccggcatctcaagaacacctactcaggactgcagctcattatcgtcatcctgcccgggaagacaccagtgtatgcggaagtgaaacgtgtgggagatacacttttgggtatggccacacagtgtgtacaagtcaagaatgtaataaaaacatctcctcaaactctttcaaacttgtgcctaaagatcaatgttaaacttggaggaatcaataatattcttgtacctcatcaaagaccttctgtgttccagcaaccagtgatcttcctgggcgcagatgtcacacacccgcctgctggtgacggaaaaaagccctccattgctgctgttgtaggtagtatggatgcccatccaagcagatactgtgccacagtaagagttcagagaccccgacaggaaatcatccaggacttggcctccatggtccgggaactgctcatccaattttataaatcaacccgattcaaacctactcgtataatcttctatcgggatggtgtttcagaaggacagttcagacaggtattatattatgagctactggcaattcgagaagcctgtatcagtttggaaaaagactatcaacctggaataacctacattgttgttcagaagagacatcatacacggttgttctgtgctgataggacagaaagggttggaagaagcggcaacatcccagctggaaccacggtggataccgacattactcacccatatgaattcgacttttatctctgtagccatgctggaatacagggtaccagccgtccttcacactatcatgttttatgggatgacaacttctttactgcagatgaacttcagctgctcacttaccagctctgtcacacttacgtacgctgtacaagatctgtttctatccctgcaccagcatattacgctcacctggtggcattcagagccagatatcatcttgtggacaaggaacatgacagtgctgaaggaagccatgtttcaggacagagcaatgggcgagatccacaagctcttgccaaggctgtacagattcaccaagataccttacgcacaatgtacttcgcttaacaagtccaagtttattctccgtgacaaagagatgaaaagtgaatcaacatacaatgtatgtttccaatggagtcaatttgctggggaggcctccagccatacagaagccagtactatgtagaggtcaggtccttatgttgatccaaggaaaatcgtttacactgtcaaagaacgcagcaccattgtacactagggagccagccgctgcttttttgcagtctcctgtagaagatgcatcaccattgtttattctcacttcttacagtctaacccttttaatgcctttacctcaagttgcttagcagcacaactatctctgcaaaaaagtaaagaaaaattgaatggtggtttaaaaacacacaattacacaaataatgattgttcagttatatgtgcagaaaaagtaatgtgcatctattcttgtaaaggagtctgtattttcaataccctcacattacttcatgtgcatatgtatctagatctaggttactgatgtatatgtgtctgtgtgtatatcttatagttcatttccctggagaactctttccttgtatccctccttaggccgcactcgtttcctttactgtctcccttgccttcagcatctatactttggtccctatagctacaagtgacattcctatgttcacacatatggttcacttgaaggaaggtttgacaaattagacttctggttttctttatgtccctattcctagctcctttcactcacacaggagtcctcagctcctgacgccatgtttgtgagcgtctgctcccttttgctctggatttaccacatgtgcactgtgtttggaaacagtggcaacctggggattcttttttgtagtgagtttgttaaagctgctctaaatacgaaaccttgtcggacatctttctgatcagtgcaaatgttctaaagcctctgtttgtatgagttatacctggaaatccctccaaaactcgataggatggaaaaaggaaggaattagggttggtttggtttgttttttgctagtttactcactgcccttataccttaatgtgattttctcacatataaatatatacatacacacacacacattgaagtatagctccctttgcctttatgttcattagaatagtgctttaataattataaactatataggctatatcttttctagaactagaatcgtgtttaagaatggagacagttttttgctctcttttagtgcaataagcagttttacaggaaagttctgtctgtcatcctcaccgtggatagcaggaagaacagacatccgtagtttaaagggaacaaagtaatacagccttaatttcagaaggagagcttcataattttcagttttaaagcaattccttaaaataattttagccaaaggagtaaaaccgatcaaaggcgcctcagctgtgaggtcagaagcatagttgaacttaagtttttaaaaatgacagtgaacagcttaagatttaaatattctttcttacttattgaagaattgtgcttctttgactaacaggaattgagaaaatacaggatgatttttttctatctttttaccagtataactttctctttaaaaataagatggcaatgatgaaggaaattaggactttggtcatttaaaattagtaaaatttccgaaatacagtgaaaactttgcaaaaacttagttttctccacttctttaatcaataaccttaataacgttggagctgtcaaagctgagtgtctcagtaatggcaggttcagggaactttgcactttgtaagtcatgaacattgcatgtgagttttctctgttgtccccaccctggctctgaggacagacactacagatgtttgtggaatgcactgtcggcctttcagaagccccaccccgccatgaacaggaatgcagttatgtcttcatttgctctctttagtccacattgtagccaatttactacatttcaatataaaatctgagccatgtcctacaggcatgaattcttctgtccctttgccagaacataaagaaagtactgtattttatatttttattgcttgaagtatctaaaattcgattctcaatactgttttaaagctgtttactgtttacaaaggattttcatgtggtttatacatttttctccttccaaaatattcccatctcaaccctggcaaaagaaaactccttacaacatatttggggtgggttggtttgcttgcttgttttggagacaacgtctctctctattgcccatgctggcctccaacccctgggctccagcagtcttcttaacctctctggtagttggaaccattgggctccttccatcatgcctggctgtcggggagcatggccaaaagaatagagtggtgcaggctccatggtaaaagtctttgcctgggttgtgtttgctcagtagaagtaaacatgtttttcagcccctgcacattcacatgaggagctttagggagtcgcatgggccctgtccctttcctgacctttggtctcacacatgccagagtgaagcccttacttttaattcttatttaaaaggattttttaaggggaagaattttttttctaaaatataaggttttatcttttaaatggcttcttttttagaatgcatttatattattcagtcttgctagtttaagataattaacttaggatatgtatagtgtatttctgttttgcctactaataaattgttataccaaacttaatgccaacaaactttatgcttagaattttaagattaaaaggcctatagaaaatacttcttgaaatttatactatttttccatttctggttagaattcctaatctttttcttaagttcctttcagtttaaacatcatgaagccatagtaacatttctcctctaccgtactcttgctcctagctgatgaatgtcagcttgtggggtttttttgttttttatggtatggcttataaaactgactaaaatgtcaatctgaacaacttatagaatcgattctcttgttaagaagagttgagagtttaatgtatattcttgatggcaaatgtgtctgtagagtgtgcatgttacatgtctatattacagtatctaagcactggcattgataccatatattaataattctgtagctgctatatttattgaggcagagtctgacatttactgcactaaacaatgagacaagcaagatgccaggcagtcagacacttttggtttcttaggtaagtttaaggacataaaacatgaaggtaacgaacagcgggtacttgaaacagtgctggcttcagtttagtaacagaatacctttgctttagaaacgtggggtttttacattgacatccacatgagggtcttcagtcttctcagtcctgggcttgggcacatttctacataaatacggatgaccttttattttattaatagataattatcttttaacaattttccaggaaaaaatagtctggaaatacctctgcttatgacctattagtttatttttgttcctaaagagaatctggaagggactccagtaggaatgttctatgtgttttggaaggcatttgataaagattcatctctaccttctagcagagagactcctcaccttcaaaagacccaacaacttttctaagccaggctctctatggtgccagtagcctaataatgactttcatcgtgtcttgtagatcgcagggtggcaagtgtgtcttggggaattaaaaccagatgctgctgagtagaaatggctcgagatctcagtcacaggcggtgtgagcacttggagcccagccatagaagtgaagcccagagagctatccatccaaaacacgtggtgggcctttcagatgcttaattcttaggaaattcactttggacactggtagaatagtttgttccctttctgattaaaatttttagagtaatgttttgccaggaagtttaactgacatctctgcataattttgactgggtgtcagtaaactaagttatatgttcagttaagccaagttaaggtacacctataagcccagccctcaggagcatcagtaattcaaagccagcctcagcaacatgagaccatgcctcaaaacacagcaaacactttgtttacctcagccctgcaggtattctcctgctgcagttccgtgtagttcacttgtctcttagaagttgtgtgagtgcctcaaagaaagacagctcacttgtcaacattcgtgaagtgttggtccctttcatcctttttgagaattcatagatattttcgaagctttaataaaaatagctggagaacttaacttgagtgaggtcttcctgagtcttgttataatcctgacttgagtatcttcattttcctttccacttaacacagaatatttctgtgattctatgagtcaaaaactaagccaggaatacttatgtaaaggtcaatacagaggacaaggggacggctaagcaggtaaaggcacacccctgcaagcctgaaaacctgagctcaatccttggaacccaaacggtggaaagacagaaccagctcccataacttgccctctgaccttcatacacatgccatggcaccacccatcgggctcaagcacacgggcgtgcgcgggcacacacacactcacgcgtacttttaaatgtaatttttaagtctatagaaatcagaaaagcagctgggtttagtgcttgcctgtgatcctaaccagaagatctggagctcaggaccagcctgggcagtttgtctaggatacatagtgacactgtgtcccccgactttgccaaccccctgccccc
//
by
@meso_cacase at
DBCLS
This page is licensed under a
Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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