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2024-05-04 03:45:11, GGRNA.v2 : RefSeq release 222 (Jan, 2024)

LOCUS       NM_145708               1343 bp    mRNA    linear   ROD 04-OCT-2023
DEFINITION  Mus musculus oocyte specific homeobox 2 (Obox2), mRNA.
ACCESSION   NM_145708 NR_003269
VERSION     NM_145708.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1343)
  AUTHORS   Ji S, Chen F, Stein P, Wang J, Zhou Z, Wang L, Zhao Q, Lin Z, Liu
            B, Xu K, Lai F, Xiong Z, Hu X, Kong T, Kong F, Huang B, Wang Q, Xu
            Q, Fan Q, Liu L, Williams CJ, Schultz RM and Xie W.
  TITLE     OBOX regulates mouse zygotic genome activation and early
            development
  JOURNAL   Nature 620 (7976), 1047-1053 (2023)
   PUBMED   37459895
REFERENCE   2  (bases 1 to 1343)
  AUTHORS   Cheng WC, Hsieh-Li HM, Yeh YJ and Li H.
  TITLE     Mice lacking the Obox6 homeobox gene undergo normal early embryonic
            development and are fertile
  JOURNAL   Dev Dyn 236 (9), 2636-2642 (2007)
   PUBMED   17676645
REFERENCE   3  (bases 1 to 1343)
  AUTHORS   Evsikov AV, Graber JH, Brockman JM, Hampl A, Holbrook AE, Singh P,
            Eppig JJ, Solter D and Knowles BB.
  TITLE     Cracking the egg: molecular dynamics and evolutionary aspects of
            the transition from the fully grown oocyte to embryo
  JOURNAL   Genes Dev 20 (19), 2713-2727 (2006)
   PUBMED   17015433
REFERENCE   4  (bases 1 to 1343)
  AUTHORS   Rajkovic A, Yan C, Yan W, Klysik M and Matzuk MM.
  TITLE     Obox, a family of homeobox genes preferentially expressed in germ
            cells
  JOURNAL   Genomics 79 (5), 711-717 (2002)
   PUBMED   11991721
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            DV663188.1, BC094912.1 and DV647958.1.
            
            On Apr 7, 2010 this sequence version replaced NM_145708.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC094912.1, DV660385.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849374 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-120               DV663188.1         1-120
            121-740             BC094912.1         1-620
            741-871             DV647958.1         129-259
            872-1343            BC094912.1         752-1223
FEATURES             Location/Qualifiers
     source          1..1343
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="7"
                     /map="7 8.46 cM"
     gene            1..1343
                     /gene="Obox2"
                     /note="oocyte specific homeobox 2"
                     /db_xref="GeneID:246792"
                     /db_xref="MGI:MGI:2149033"
     exon            1..156
                     /gene="Obox2"
                     /inference="alignment:Splign:2.1.0"
     exon            157..418
                     /gene="Obox2"
                     /inference="alignment:Splign:2.1.0"
     misc_feature    184..186
                     /gene="Obox2"
                     /note="upstream in-frame stop codon"
     CDS             202..657
                     /gene="Obox2"
                     /codon_start=1
                     /product="oocyte specific homeobox 2"
                     /protein_id="NP_663754.2"
                     /db_xref="CCDS:CCDS52034.1"
                     /db_xref="GeneID:246792"
                     /db_xref="MGI:MGI:2149033"
                     /translation="
MAEGPSLHPKLQVDSNIPIEISSQIPQEPARNLAFQMRQSPLVTPGSTTKSSLSVPERNLLKQESEGPSRQSGCMPLSDKYVNKQTSPMASRKFRKERTVYTKEEQGLLQKHFDECSTQTRRKLWSWHYQLVLQRGRLRYGSRTTELSTGR"
     exon            419..617
                     /gene="Obox2"
                     /inference="alignment:Splign:2.1.0"
     exon            618..1329
                     /gene="Obox2"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
tgagaattaaggatttgaatattgcaagtgggtggagccagcgtgaaggaggagcattgaattccaagtttgcagagatatataagggcaggtcttctgagtagaattaaaacagccagaggatttagcaagttacagcaaccctctggattcctggttatccagtacaggaacatactccaataaattcagaacacacaaatggcggaaggtccctccttgcatccaaaactccaagtggattcgaatatacccatagaaataagttcccaaatacctcaagaaccggcaaggaacttagcttttcaaatgcgtcagagtcccctagtgaccccaggaagtacaacgaaatcaagtctttcagtccctgaaaggaacctacttaagcaagagtctgaaggaccatcaagacaatcaggttgtatgccactgtcagataaatatgttaacaaacaaactagcccaatggcttcaagaaagtttcgaaaagaacgaactgtgtacaccaaagaagagcagggcctgctgcaaaaacattttgatgagtgcagtacccaaacaagaagaaaattgtggagctggcactatcagttggtgttacaaagagggagattaagatatggttcaagaacaaccgagctaagtacaggcagatgaacctccagaatattgaacaagcactgccagagtcaaatggaagctctaaagcggtttctgagtcaacccattttcctgttgttgcctctgacaatggagagtccatgtgttcaggcacatttggtgaggattccattcccaaattcaactgcagctaggaatcttccctgcattgttttcaggcctgagatggggccatgtgttgtacgcaagaatatgtgcttgatggccatacccctgttacagcttggaactctggtcaatcagcagcagttgaatatcacacttagcagtagctgaagctccagtcgggctggcatatgctgcccaagccccagaggatgctcacaattcaggtccatctgcagacaagctctggcaaaggatccttgaagacttttgacacatcagatgactgtcttgccatgagaaacccctccactccagcttacacctctcaggtccttgacgagtccaaccttacagccatgaagaagtgtgttatatacacctttattctctgtatttggagaaataaccagtcttatctgtagaagcatcataccactgtgttttatgtagtgcgattgtttgaaattcagtttaggtcttaattttttattgttagagtatatgttcattaaataaaaggagaaaatagtacttttaaaaaaaaaaaaaaaaaa
//

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If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596. [Full Text]