2024-05-04 03:45:11, GGRNA.v2 : RefSeq release 222 (Jan, 2024)
LOCUS NM_145708 1343 bp mRNA linear ROD 04-OCT-2023 DEFINITION Mus musculus oocyte specific homeobox 2 (Obox2), mRNA. ACCESSION NM_145708 NR_003269 VERSION NM_145708.2 KEYWORDS RefSeq; RefSeq Select. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 1343) AUTHORS Ji S, Chen F, Stein P, Wang J, Zhou Z, Wang L, Zhao Q, Lin Z, Liu B, Xu K, Lai F, Xiong Z, Hu X, Kong T, Kong F, Huang B, Wang Q, Xu Q, Fan Q, Liu L, Williams CJ, Schultz RM and Xie W. TITLE OBOX regulates mouse zygotic genome activation and early development JOURNAL Nature 620 (7976), 1047-1053 (2023) PUBMED 37459895 REFERENCE 2 (bases 1 to 1343) AUTHORS Cheng WC, Hsieh-Li HM, Yeh YJ and Li H. TITLE Mice lacking the Obox6 homeobox gene undergo normal early embryonic development and are fertile JOURNAL Dev Dyn 236 (9), 2636-2642 (2007) PUBMED 17676645 REFERENCE 3 (bases 1 to 1343) AUTHORS Evsikov AV, Graber JH, Brockman JM, Hampl A, Holbrook AE, Singh P, Eppig JJ, Solter D and Knowles BB. TITLE Cracking the egg: molecular dynamics and evolutionary aspects of the transition from the fully grown oocyte to embryo JOURNAL Genes Dev 20 (19), 2713-2727 (2006) PUBMED 17015433 REFERENCE 4 (bases 1 to 1343) AUTHORS Rajkovic A, Yan C, Yan W, Klysik M and Matzuk MM. TITLE Obox, a family of homeobox genes preferentially expressed in germ cells JOURNAL Genomics 79 (5), 711-717 (2002) PUBMED 11991721 COMMENT VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from DV663188.1, BC094912.1 and DV647958.1. On Apr 7, 2010 this sequence version replaced NM_145708.1. ##Evidence-Data-START## Transcript exon combination :: BC094912.1, DV660385.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN00849374 [ECO:0000348] ##Evidence-Data-END## ##RefSeq-Attributes-START## RefSeq Select criteria :: based on single protein-coding transcript ##RefSeq-Attributes-END## COMPLETENESS: complete on the 3' end. PRIMARY REFSEQ_SPAN PRIMARY_IDENTIFIER PRIMARY_SPAN COMP 1-120 DV663188.1 1-120 121-740 BC094912.1 1-620 741-871 DV647958.1 129-259 872-1343 BC094912.1 752-1223 FEATURES Location/Qualifiers source 1..1343 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6" /db_xref="taxon:10090" /chromosome="7" /map="7 8.46 cM" gene 1..1343 /gene="Obox2" /note="oocyte specific homeobox 2" /db_xref="GeneID:246792" /db_xref="MGI:MGI:2149033" exon 1..156 /gene="Obox2" /inference="alignment:Splign:2.1.0" exon 157..418 /gene="Obox2" /inference="alignment:Splign:2.1.0" misc_feature 184..186 /gene="Obox2" /note="upstream in-frame stop codon" CDS 202..657 /gene="Obox2" /codon_start=1 /product="oocyte specific homeobox 2" /protein_id="NP_663754.2" /db_xref="CCDS:CCDS52034.1" /db_xref="GeneID:246792" /db_xref="MGI:MGI:2149033" /translation="
MAEGPSLHPKLQVDSNIPIEISSQIPQEPARNLAFQMRQSPLVTPGSTTKSSLSVPERNLLKQESEGPSRQSGCMPLSDKYVNKQTSPMASRKFRKERTVYTKEEQGLLQKHFDECSTQTRRKLWSWHYQLVLQRGRLRYGSRTTELSTGR"
exon 419..617 /gene="Obox2" /inference="alignment:Splign:2.1.0" exon 618..1329 /gene="Obox2" /inference="alignment:Splign:2.1.0" ORIGIN
tgagaattaaggatttgaatattgcaagtgggtggagccagcgtgaaggaggagcattgaattccaagtttgcagagatatataagggcaggtcttctgagtagaattaaaacagccagaggatttagcaagttacagcaaccctctggattcctggttatccagtacaggaacatactccaataaattcagaacacacaaatggcggaaggtccctccttgcatccaaaactccaagtggattcgaatatacccatagaaataagttcccaaatacctcaagaaccggcaaggaacttagcttttcaaatgcgtcagagtcccctagtgaccccaggaagtacaacgaaatcaagtctttcagtccctgaaaggaacctacttaagcaagagtctgaaggaccatcaagacaatcaggttgtatgccactgtcagataaatatgttaacaaacaaactagcccaatggcttcaagaaagtttcgaaaagaacgaactgtgtacaccaaagaagagcagggcctgctgcaaaaacattttgatgagtgcagtacccaaacaagaagaaaattgtggagctggcactatcagttggtgttacaaagagggagattaagatatggttcaagaacaaccgagctaagtacaggcagatgaacctccagaatattgaacaagcactgccagagtcaaatggaagctctaaagcggtttctgagtcaacccattttcctgttgttgcctctgacaatggagagtccatgtgttcaggcacatttggtgaggattccattcccaaattcaactgcagctaggaatcttccctgcattgttttcaggcctgagatggggccatgtgttgtacgcaagaatatgtgcttgatggccatacccctgttacagcttggaactctggtcaatcagcagcagttgaatatcacacttagcagtagctgaagctccagtcgggctggcatatgctgcccaagccccagaggatgctcacaattcaggtccatctgcagacaagctctggcaaaggatccttgaagacttttgacacatcagatgactgtcttgccatgagaaacccctccactccagcttacacctctcaggtccttgacgagtccaaccttacagccatgaagaagtgtgttatatacacctttattctctgtatttggagaaataaccagtcttatctgtagaagcatcataccactgtgttttatgtagtgcgattgtttgaaattcagtttaggtcttaattttttattgttagagtatatgttcattaaataaaaggagaaaatagtacttttaaaaaaaaaaaaaaaaaa
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Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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