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Previous release (v1)
2024-04-29 14:35:52, GGRNA.v2 : RefSeq release 222 (Jan, 2024)
LOCUS NM_053185 6648 bp mRNA linear ROD 04-AUG-2023
DEFINITION Mus musculus collagen, type IV, alpha 6 (Col4a6), mRNA.
ACCESSION NM_053185
VERSION NM_053185.2
KEYWORDS RefSeq; RefSeq Select.
SOURCE Mus musculus (house mouse)
ORGANISM Mus musculus
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE 1 (bases 1 to 6648)
AUTHORS Thomas MH, Gui Y, Garcia P, Karout M, Gomez Ramos B, Jaeger C,
Michelucci A, Gaigneaux A, Kollmus H, Centeno A, Schughart K,
Balling R, Mittelbronn M, Nadeau JH, Sauter T, Williams RW,
Sinkkonen L and Buttini M.
TITLE Quantitative trait locus mapping identifies a locus linked to
striatal dopamine and points to collagen IV alpha-6 chain as a
novel regulator of striatal axonal branching in mice
JOURNAL Genes Brain Behav 20 (8), e12769 (2021)
PUBMED 34453370
REMARK GeneRIF: Quantitative trait locus mapping identifies a locus linked
to striatal dopamine and points to collagen IV alpha-6 chain as a
novel regulator of striatal axonal branching in mice.
REFERENCE 2 (bases 1 to 6648)
AUTHORS Tang S, Yonezawa T, Maeda Y, Ono M, Maeba T, Miyoshi T, Momota R,
Tomono Y and Oohashi T.
TITLE Lack of collagen alpha6(IV) chain in mice does not cause
severe-to-profound hearing loss or cochlear malformation, a
distinct phenotype from nonsyndromic hearing loss with COL4A6
missense mutation
JOURNAL PLoS One 16 (4), e0249909 (2021)
PUBMED 33848312
REMARK Publication Status: Online-Only
REFERENCE 3 (bases 1 to 6648)
AUTHORS Komori T, Ono M, Hara ES, Ueda J, Nguyen HTT, Nguyen HT, Yonezawa
T, Maeba T, Kimura-Ono A, Takarada T, Momota R, Maekawa K, Kuboki T
and Oohashi T.
TITLE Type IV collagen alpha6 chain is a regulator of keratin 10 in
keratinization of oral mucosal epithelium
JOURNAL Sci Rep 8 (1), 2612 (2018)
PUBMED 29422532
REMARK GeneRIF: These findings indicate that alpha112:alpha556 (IV)
network, which is the only network that includes the alpha6(IV)
chain, is one regulator of KRT10 expression in keratinization of
oral mucosal epithelium.
Publication Status: Online-Only
REFERENCE 4 (bases 1 to 6648)
AUTHORS Naba A, Clauser KR, Mani DR, Carr SA and Hynes RO.
TITLE Quantitative proteomic profiling of the extracellular matrix of
pancreatic islets during the angiogenic switch and insulinoma
progression
JOURNAL Sci Rep 7, 40495 (2017)
PUBMED 28071719
REMARK Publication Status: Online-Only
REFERENCE 5 (bases 1 to 6648)
AUTHORS Murata T, Katayama K, Oohashi T, Jahnukainen T, Yonezawa T, Sado Y,
Ishikawa E, Nomura S, Tryggvason K and Ito M.
TITLE COL4A6 is dispensable for autosomal recessive Alport syndrome
JOURNAL Sci Rep 6, 29450 (2016)
PUBMED 27377778
REMARK GeneRIF: although alpha5 and alpha6 (IV) chains are induced in the
glomerular basement membrane in autosomal recessive Alport
syndrome, their induction does not seem to play a major
compensatory role
Publication Status: Online-Only
REFERENCE 6 (bases 1 to 6648)
AUTHORS Shindo T, Manabe I, Fukushima Y, Tobe K, Aizawa K, Miyamoto S,
Kawai-Kowase K, Moriyama N, Imai Y, Kawakami H, Nishimatsu H,
Ishikawa T, Suzuki T, Morita H, Maemura K, Sata M, Hirata Y,
Komukai M, Kagechika H, Kadowaki T, Kurabayashi M and Nagai R.
TITLE Kruppel-like zinc-finger transcription factor KLF5/BTEB2 is a
target for angiotensin II signaling and an essential regulator of
cardiovascular remodeling
JOURNAL Nat Med 8 (8), 856-863 (2002)
PUBMED 12101409
REFERENCE 7 (bases 1 to 6648)
AUTHORS Nagai N, Nakano K, Sado Y, Naito I, Gunduz M, Tsujigiwa H,
Nagatsuka H, Ninomiya Y and Siar CH.
TITLE Localization of type IV collagen a 1 to a 6 chains in basement
membrane during mouse molar germ development
JOURNAL Int J Dev Biol 45 (7), 827-831 (2001)
PUBMED 11732842
REFERENCE 8 (bases 1 to 6648)
AUTHORS Bhatt RS, Tomoda T, Fang Y and Hatten ME.
TITLE Discoidin domain receptor 1 functions in axon extension of
cerebellar granule neurons
JOURNAL Genes Dev 14 (17), 2216-2228 (2000)
PUBMED 10970885
REFERENCE 9 (bases 1 to 6648)
AUTHORS Saito K, Naito I, Seki T, Oohashi T, Kimura E, Momota R, Kishiro Y,
Sado Y, Yoshioka H and Ninomiya Y.
TITLE Differential expression of mouse alpha5(IV) and alpha6(IV) collagen
genes in epithelial basement membranes
JOURNAL J Biochem 128 (3), 427-434 (2000)
PUBMED 10965041
REFERENCE 10 (bases 1 to 6648)
AUTHORS Lu W, Phillips CL, Killen PD, Hlaing T, Harrison WR, Elder FF,
Miner JH, Overbeek PA and Meisler MH.
TITLE Insertional mutation of the collagen genes Col4a3 and Col4a4 in a
mouse model of Alport syndrome
JOURNAL Genomics 61 (2), 113-124 (1999)
PUBMED 10534397
COMMENT VALIDATED REFSEQ: This record has undergone validation or
preliminary review. The reference sequence was derived from
AB041351.1, CF538953.1, CF747750.1, CV555853.1, CF539876.1,
CN535678.1 and AL691493.17.
On Apr 8, 2008 this sequence version replaced NM_053185.1.
Sequence Note: This RefSeq record was created from transcript and
genomic sequence data because no single transcript was available
for the full length of the gene. The extent of this transcript is
supported by transcript alignments.
Publication Note: This RefSeq record includes a subset of the
publications that are available for this gene. Please see the Gene
record to access additional publications.
##Evidence-Data-START##
Transcript exon combination :: AB041351.1 [ECO:0000332]
RNAseq introns :: single sample supports all introns
SAMN01164138 [ECO:0000348]
##Evidence-Data-END##
##RefSeq-Attributes-START##
RefSeq Select criteria :: based on conservation, expression,
longest protein
##RefSeq-Attributes-END##
COMPLETENESS: complete on the 3' end.
PRIMARY REFSEQ_SPAN PRIMARY_IDENTIFIER PRIMARY_SPAN COMP
1-215 AB041351.1 1-215
216-681 CF538953.1 213-678
682-1718 AB041351.1 682-1718
1719-1881 CF747750.1 541-703
1882-2342 CV555853.1 187-647
2343-2816 CF539876.1 159-632
2817-4864 AB041351.1 2817-4864
4865-5454 CN535678.1 105-694
5455-6648 AL691493.17 4736-5929 c
FEATURES Location/Qualifiers
source 1..6648
/organism="Mus musculus"
/mol_type="mRNA"
/strain="C57BL/6"
/db_xref="taxon:10090"
/chromosome="X"
/map="X 61.8 cM"
gene 1..6648
/gene="Col4a6"
/note="collagen, type IV, alpha 6"
/db_xref="GeneID:94216"
/db_xref="MGI:MGI:2152695"
exon 1..268
/gene="Col4a6"
/inference="alignment:Splign:2.1.0"
misc_feature 195..197
/gene="Col4a6"
/note="upstream in-frame stop codon"
CDS 258..5333
/gene="Col4a6"
/note="procollagen, type IV, alpha 6"
/codon_start=1
/product="collagen alpha-6(IV) chain precursor"
/protein_id="NP_444415.2"
/db_xref="CCDS:CCDS41153.1"
/db_xref="GeneID:94216"
/db_xref="MGI:MGI:2152695"
/translation="
MHPGLWLFLVSLCLTKELAESGQKMSYGKPCGSRDCHGVCTCFPEKGARGHPGPIGTQGPAGPEGFTGPTGLSGLKGERGSPGPLGPYGSKGDKGPIGVPGFVGISGIPGHPGQPGPRGPPGPDGCNGTQGAVGFPGPDGYPGILGPPGLPGHKGAKGEPVPFQGSITGIRGDPGLPGLDGIPGPSGSSGSPGDAGPIGPPGLQGPPGLPGLPGPEGNMGLGFQGEKGVKGDVGLPGPAGPPPSTGELEFMGFPKGKKGSKGEPGPPGFPGMSGPPGVPEFGSTGEKGEKGILGLPGPRGPMGSEGIQGHPGRQGKKGTSGFPGINGFPGIKGEKGDIGVRGPDSFTDADGAVISGYPGDPGVLGLPGLRGDEGVQGQRGPSGTPGLPSLTGLPGALGPQGFPGLKGDQGNSGRTTFGEAGLPGRVGLPGLPGLPGPSGPPGRTFETGHLSNIEPGFPGLQGEQGPKGHQGLKGVKGDSGFCACEGGAPNIGPHGEPGLPGIQGPIGLQGFKGTKGDPGSRGASGPAGTPGLFGPRGQTGLKGKKGEPTVSRGSKMSGDKGDPGPQGTPGLAGTPGKDGRPGLPGLPGIQGDGGSGFPGERGLPGLPGEKGHDGPIGPPGIGLPGPPGPRGLPGDKGVDGLPGQQGLRGAQGVTLPCIIPGSYGPSGFPGAPGFPGSKGARGLPGIPGKPGTHGSKGGPGSPGLMHLPGLPGFPGVRGEKGLPGFPGLPGKDGYPGKAGSPGLPGFKGAAGDIFGAENGASGEQGLQGLPGDKGFPGDSGLPGPKGLNGKPGMLGPKGERGNPGTSGPPGQPGPSGSTDPFGIKGTSGFPGAPGLPGISGHPGKKGQRGDIGQPGSTGKRGLPGIKGLPGPQGSPGFLGSPGLSGVTGLPGIEGQKGEKGSSGPVGFPGLPGLPGLPGADGLKGFSGSFGKVGQPGQTGTSGEKGDRGDPGPVGISSPRPPMLNLWFKGEKGSRGSAGSDGFPGPRGDKGEPGIPGLPGPPGATGQTNTIKGLNGRPGSPGSMGRRGLPGLKGSLGIAGFPGMPGKSGSQGLTGTSGLLGATGIPGLKGDQGQTLGISGSPGPKGQPGELGFKGVKGKDGLVGDRGYPGNKGDGGKVGITGDPGFPGSPGLQGISGMNGDPGLPGSSGHLGSIGRPGPSGLIGPKGFPGAPGLHGLNGLPGTKGTHGTPGASITGVPGPAGLPGPKGERGVPGIVIGDPGKQGSKGQKGDQGSPGLQGPAGTPGAPGISLPSVIAGQPGDPGRPGLDGERGRPGPPGPPGPPGPSSDQGDPGDSGFPGIPGLQGFKGNQGLPGFSGLSGELGLKGMRGEPGLMGTPGKIGQPGDPGFPGMKGKAGPRGFSGPQGAPGHTPIAEAMQVPPGPLGLPGIDGIPGLIGDPGSQGSVGLQGSKGLPGIPGKDGPSGLPGPSGILGDPGLPGLQGPPGFEGAPGNQGPIGQPGMPGHGVRVGYTLVKHSQSEQVPLCPTGMSRLWVGYSLLFVEGQEKAHNQDLGFAGSCLPRFSTMPFIYCNINEVCHYARRNDKSYWLSTTAPIPMMPVGQTQIPQYISRCSVCEAPSQAIAVHSQDIIVPQCPLGWHSLWIGYSFLMHTAAGAEGGGQSLVSPGSCLEDFRATPFIECSGARGTCHYFANKYSFWLTTVEERGQFREEPVSETLKTGQLHTRVSRCQVCMKTP"
sig_peptide 258..314
/gene="Col4a6"
/inference="COORDINATES: ab initio prediction:SignalP:4.0"
misc_feature <390..>1265
/gene="Col4a6"
/note="LPXTG-anchored collagen-like adhesin Scl2/SclB;
Region: gly_rich_SclB; NF038329"
/db_xref="CDD:439624"
misc_feature <1137..>2009
/gene="Col4a6"
/note="LPXTG-anchored collagen-like adhesin Scl2/SclB;
Region: gly_rich_SclB; NF038329"
/db_xref="CDD:439624"
misc_feature <1740..>2480
/gene="Col4a6"
/note="LPXTG-anchored collagen-like adhesin Scl2/SclB;
Region: gly_rich_SclB; NF038329"
/db_xref="CDD:439624"
misc_feature <2721..>3464
/gene="Col4a6"
/note="LPXTG-anchored collagen-like adhesin Scl2/SclB;
Region: gly_rich_SclB; NF038329"
/db_xref="CDD:439624"
misc_feature <3510..>4346
/gene="Col4a6"
/note="LPXTG-anchored collagen-like adhesin Scl2/SclB;
Region: gly_rich_SclB; NF038329"
/db_xref="CDD:439624"
misc_feature <3924..>4637
/gene="Col4a6"
/note="LPXTG-anchored collagen-like adhesin Scl2/SclB;
Region: gly_rich_SclB; NF038329"
/db_xref="CDD:439624"
misc_feature 4659..4973
/gene="Col4a6"
/note="C-terminal tandem repeated domain in type 4
procollagen; Region: C4; pfam01413"
/db_xref="CDD:426251"
misc_feature 4983..5321
/gene="Col4a6"
/note="C-terminal tandem repeated domain in type 4
procollagen; Region: C4; pfam01413"
/db_xref="CDD:426251"
exon 269..320
/gene="Col4a6"
/inference="alignment:Splign:2.1.0"
exon 321..404
/gene="Col4a6"
/inference="alignment:Splign:2.1.0"
exon 405..539
/gene="Col4a6"
/inference="alignment:Splign:2.1.0"
exon 540..584
/gene="Col4a6"
/inference="alignment:Splign:2.1.0"
exon 585..701
/gene="Col4a6"
/inference="alignment:Splign:2.1.0"
exon 702..770
/gene="Col4a6"
/inference="alignment:Splign:2.1.0"
exon 771..806
/gene="Col4a6"
/inference="alignment:Splign:2.1.0"
exon 807..869
/gene="Col4a6"
/inference="alignment:Splign:2.1.0"
exon 870..905
/gene="Col4a6"
/inference="alignment:Splign:2.1.0"
exon 906..947
/gene="Col4a6"
/inference="alignment:Splign:2.1.0"
exon 948..1040
/gene="Col4a6"
/inference="alignment:Splign:2.1.0"
exon 1041..1094
/gene="Col4a6"
/inference="alignment:Splign:2.1.0"
exon 1095..1154
/gene="Col4a6"
/inference="alignment:Splign:2.1.0"
exon 1155..1199
/gene="Col4a6"
/inference="alignment:Splign:2.1.0"
exon 1200..1253
/gene="Col4a6"
/inference="alignment:Splign:2.1.0"
exon 1254..1323
/gene="Col4a6"
/inference="alignment:Splign:2.1.0"
exon 1324..1431
/gene="Col4a6"
/inference="alignment:Splign:2.1.0"
exon 1432..1581
/gene="Col4a6"
/inference="alignment:Splign:2.1.0"
exon 1582..1686
/gene="Col4a6"
/inference="alignment:Splign:2.1.0"
exon 1687..1847
/gene="Col4a6"
/inference="alignment:Splign:2.1.0"
exon 1848..2027
/gene="Col4a6"
/inference="alignment:Splign:2.1.0"
exon 2028..2211
/gene="Col4a6"
/inference="alignment:Splign:2.1.0"
exon 2212..2283
/gene="Col4a6"
/inference="alignment:Splign:2.1.0"
exon 2284..2391
/gene="Col4a6"
/inference="alignment:Splign:2.1.0"
exon 2392..2613
/gene="Col4a6"
/inference="alignment:Splign:2.1.0"
exon 2614..2775
/gene="Col4a6"
/inference="alignment:Splign:2.1.0"
exon 2776..2946
/gene="Col4a6"
/inference="alignment:Splign:2.1.0"
exon 2947..3090
/gene="Col4a6"
/inference="alignment:Splign:2.1.0"
exon 3091..3216
/gene="Col4a6"
/inference="alignment:Splign:2.1.0"
exon 3217..3398
/gene="Col4a6"
/inference="alignment:Splign:2.1.0"
exon 3399..3462
/gene="Col4a6"
/inference="alignment:Splign:2.1.0"
exon 3463..3537
/gene="Col4a6"
/inference="alignment:Splign:2.1.0"
exon 3538..3645
/gene="Col4a6"
/inference="alignment:Splign:2.1.0"
exon 3646..3753
/gene="Col4a6"
/inference="alignment:Splign:2.1.0"
exon 3754..3825
/gene="Col4a6"
/inference="alignment:Splign:2.1.0"
exon 3826..3951
/gene="Col4a6"
/inference="alignment:Splign:2.1.0"
exon 3952..4068
/gene="Col4a6"
/inference="alignment:Splign:2.1.0"
exon 4069..4230
/gene="Col4a6"
/inference="alignment:Splign:2.1.0"
exon 4231..4329
/gene="Col4a6"
/inference="alignment:Splign:2.1.0"
exon 4330..4476
/gene="Col4a6"
/inference="alignment:Splign:2.1.0"
exon 4477..4593
/gene="Col4a6"
/inference="alignment:Splign:2.1.0"
exon 4594..4785
/gene="Col4a6"
/inference="alignment:Splign:2.1.0"
exon 4786..5072
/gene="Col4a6"
/inference="alignment:Splign:2.1.0"
exon 5073..6648
/gene="Col4a6"
/inference="alignment:Splign:2.1.0"
regulatory 6627..6632
/regulatory_class="polyA_signal_sequence"
/gene="Col4a6"
polyA_site 6648
/gene="Col4a6"
ORIGIN
cttcctccctgggctcatggaactatctcctgagtgctagaagttgtagcgggcaccactgcgtgtgttttcctttggggcactttttttttctagcggctgattttagtttcttccaaattaagccacttcgccccccttccccacactgtcctgaataaggaacaaactgccaagcatcaacggagcccagatgagcccgcgccgcggagcagcttagcagtctcctgggacccagctccggagcagccacaagcatgcaccctggattgtggctgttcctggtttccttatgcttgaccaaagaactggcagaatcgggacagaagatgtcctatggaaagccatgtgggagccgagattgccatggagtctgtacatgctttcctgagaaaggagcaagagggcaccctggaccaattggaactcaaggtccagccggtccggaagggtttactggtccaactggtttatcaggtttgaaaggagaaagaggctccccaggccctctgggaccatatggatcaaaaggagataagggtcccattggagttcctggctttgttggcatcagtggtattccgggccaccctggacagccaggtccaagaggtccacctggcccagatggctgtaatggaactcaaggagctgttggatttccaggccctgatggctaccctgggattttaggaccacctgggctgcctggtcacaaaggtgccaaaggagagcctgttccttttcaaggcagcattacaggaataaggggagatcctgggctgcctggactagatggaatccctggtccatcaggatcctccggctctcctggagatgcaggacccataggaccaccaggcttacaaggtcccccaggcctccccggacttcccggtcctgagggaaatatggggttaggtttccaaggagaaaaaggagtcaagggggatgttggcctccctggccctgcaggaccacctccatctactggggaactagaattcatgggattccccaaaggaaagaaaggttccaagggtgagccagggcctccaggtttcccaggaatgagtggccctccaggtgtcccggaatttggatctactggagaaaaaggagaaaaggggattcttggtttgccaggacctaggggtcccatgggttcagaaggaatacaaggccatccagggagacagggaaagaaggggacttcaggttttcctgggattaacgggttcccaggaattaagggtgaaaagggagacattggtgttcgaggcccagacagtttcactgatgcagatggcgctgtgatctcaggttatcctggagaccctggtgtgctgggccttccaggccttagaggagatgaaggcgtccaaggccaacgtggcccttctggaacccctggcctcccatcattaacaggtcttccaggtgccctagggcctcagggatttcctggcctgaaaggagaccaaggaaactcaggacgtaccacctttggagaagctggcctacctggcagggttggtttaccaggtttaccaggcctgccaggcccatcaggcccacctggtcgcacatttgagactggacatctgtccaacatagagcctgggttccctggtctccaaggagaacaaggtccaaaaggacatcaaggcctcaaaggagtaaaaggagactctggtttttgtgcttgtgaaggtggtgcccccaacattggaccacatggggaaccaggtctgcctgggatacaaggtcccattggtctacagggttttaaggggactaaaggagatccaggctcaaggggagcatctggtcctgcagggacgccagggctatttggacctagaggtcagactggcctcaaaggaaagaaaggagaaccaactgtcagtagaggatcaaaaatgtcaggggacaaaggtgaccctggtcctcagggtaccccaggtttggcaggaactccgggcaaggatggaagaccaggtttaccaggcctcccaggcattcagggagatggtgggtctggcttcccaggtgaaagagggttaccaggacttcctggtgaaaaaggccatgatggtccaattggaccaccaggaattgggctgccaggacctcctgggccccgtggacttcctggagataaaggagtagatgggttaccagggcaacaaggcctccgtggagctcaaggagtcaccttgccttgtatcattcctgggtcatatggtccatcaggatttcctggagctcctggattcccaggctctaagggagctcggggcctccctggaattccaggcaagcctggcactcacggaagcaaaggagggcctgggagtccagggttaatgcatctcccaggattgccagggtttcctggagttcgtggggagaagggattacctgggtttcctgggcttcctggaaaagatggctaccctgggaaagctggcagtccagggttaccaggtttcaagggagctgctggtgacatatttggtgctgaaaatggtgcttcgggggagcaaggcctacagggattgccaggggacaaaggatttcctggagactctggccttccaggacccaagggtttgaatgggaaacctggtatgctaggccccaagggtgagcggggcaaccctggaacatcaggaccaccaggacagccaggaccctcagggtctactgacccatttggcatcaagggcacatctggattcccaggagcaccaggccttccaggcatctcagggcaccctggaaagaaaggtcaaagaggagacataggtcagcctggatcaactggaaaaagaggtctacctgggataaaaggccttcctggtcctcaagggtcacctggcttcctggggagcccaggtttgtcaggcgtcactgggttgccgggcatcgaaggccaaaagggtgaaaaggggtcctctggaccagtaggatttcctgggttacctggtcttcctggtcttcctggagctgatggattaaagggattttctgggtcatttggaaaggtgggacaacctggacagactggtacttccggagaaaaaggagacagaggggatccagggccagttggcatatctagtccaagacctccaatgctaaacctttggttcaaaggagaaaaaggctctcgaggttctgctggatcggatggatttcctgggcccagaggtgacaaaggagagcctggcatcccagggttaccaggtccacctggagctactggacaaaccaataccatcaaagggctcaatgggaggccaggttctcctggatctatgggaagaaggggattacctggcctgaaggggtctcttgggattgcaggtttcccaggaatgccagggaaaagcggttcacaggggctcactgggacttctggcctcctgggagcaactggtatcccaggtttaaaaggagatcaaggccaaacacttggcatttctggaagcccaggacccaagggacagcctggagaattaggttttaaaggtgtcaaaggaaaagatggactagttggtgatagaggttacccaggaaacaaaggtgatggtggaaaagttggaattactggagatcctggcttccctggctccccaggacttcaagggatttcaggtatgaatggagacccaggcctcccaggttcctctggccatctggggtcaattggccgccctggaccctcaggcttaataggacctaaaggattccctggagctcctggtttacatggactgaatggacttccaggcaccaagggcacccatggcactccaggagccagtatcactggtgttcctgggccggctggcctgcctggtcccaaaggggaaaggggagtgccaggaattgtcatcggagatccagggaaacaaggttcaaagggacaaaaaggtgaccaaggttccccaggtcttcaaggtcctgctggtacccctggagccccaggcatctccttgccctcagtcatagcaggacagcctggtgaccctgggcggccaggcctagatggagaacgaggccgcccaggccctccaggtcctccaggtccccctgggccatcctcagatcaaggcgatcctggagactctggcttccctgggattccaggccttcaagggttcaagggaaaccaaggacttccaggtttctctggcctctctggagagctagggctaaagggcatgagaggggaacctggcctcatggggactcctggcaagatcgggcaaccaggagacccaggatttcctgggatgaaggggaaggcggggccaagaggcttttccggcccacagggagctccaggacacacaccaattgctgaagctatgcaggttcctccaggacctttgggtctgccaggcattgatggtatcccaggcctcataggagaccctgggtctcaaggctctgtgggtctgcaaggttccaaaggcctacctggcatccctggtaaggatggccccagtgggcttccaggcccatctggaatccttggtgatcctggtctccctggactacaaggacctccaggatttgaaggagctccgggaaatcagggccccattgggcagcctgggatgcctgggcacggtgtgagagtgggctacacactagtaaaacacagtcagtcagaacaggtgccactatgccccactgggatgagccggctctgggtgggttacagcttgctcttcgtggaggggcaggagaaagcccataaccaggatctgggatttgctggctcctgcctgccccgattcagcaccatgcccttcatatactgcaacatcaatgaagtgtgccactatgccagacgcaatgataaatcttactggctctccactactgcccccattcccatgatgcctgtgggccagacccagattccccagtatatcagccgctgctctgtatgtgaggcaccctcacaagccattgctgtacacagtcaggacatcattgtcccacagtgccctctgggctggcacagcctctggatcggatactccttcctcatgcacactgctgctggggctgagggtggaggccagtccctagtctcccctggctcgtgtcttgaggacttccgggccactcctttcattgagtgcagcggcgcccgtggtacatgccactactttgccaacaagtacagtttctggctgacaacggtggaggagagagggcagtttcgggaagagcccgtgtctgagacgctgaaaactgggcagcttcacaccagggtgagccgctgccaggtgtgtatgaaaaccccgtagggtactgcccgtcatccagcccacctcacaacactcacctcaacagtctgagaaaggaaggcctgagcccatctgcctgtcaagttgtacatcaatgcctcgtttggactggactactggacaatggtcatcccaaccctcagacccaacagatgagcccactgtgctaggatttgctttcctgtttccatccatctggtgctaacattccatttagatatgtgtgtgattactcatggctaccttaggaaggtgtgctaagctgtcacttgcgaagatggctagagctctcttcactgccttaagctggaagttctttataacagcgaagttatgtctttatgacaagacgtcaccacacatcatttgagtcaaactaaagctcaggatttccaccctaaaaatacgtttctggctgaatatgatagataattcaagtctgcctagggctagccctccctactgaaggcagcctattatatttagacaggcagtagtgttggaatgagaaaccagcctatagccagaactgagctgtgattccttgcagagttttgttaagcccatgccccatcttgagtaggaaaggctgaaaggccagtatttggtcctagacaaatcactgtcccctggtcccacatctagagatataagacaagttggcccagtccaaagtggaaccaagaattcgataagtgtgatcaagcttgtcacagaaagacatgagaatcacttctccttcttcttggcctagggcagaaggagaaatacatatagaggtagcagttttgcttctgagtccaggaaccaaaaggtaaagctcatgtccccattcctcagaagtccctagttattccaaatgccacccagatttatgcagggtgacaaactgaagctgcagtgtgttggctccttgcatgctgaggctcttagaggtgttctgataaaatggccatccaaacaccctcccacgggtagccttttaaactatttgacagggttttttttttttaatttcataaaaatctagcacacaccaatgttagcagacccgaggtacattctgagctggccatgaagtatactgccttctgtttgaagcagttcattttaattaccagttgcggagaacacaatcagttccactgacatgaagcgctcccttgcaggtgattggcttccttgagtactatgtaaaccgtgcccacgcaggcaaagcataacaagtacattctgagctcttgttatcacctcctagataagtaacaaatggtgtcagctttgtacatagcaaataaaattaatgaaatacgaa
//
by
@meso_cacase at
DBCLS
This page is licensed under a
Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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