LOCUS       NM_001419337            3663 bp    mRNA    linear   ROD 24-SEP-2023
DEFINITION  Mus musculus NudC domain containing 3 (Nudcd3), transcript variant
            3, mRNA.
ACCESSION   NM_001419337
VERSION     NM_001419337.1
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 3663)
  AUTHORS   Yang J, Xu J, Zhang L, Li Y and Chen M.
  TITLE     Identifying key m6A-methylated lncRNAs and genes associated with
            neural tube defects via integrative MeRIP and RNA sequencing
            analyses
  JOURNAL   Front Genet 13, 974357 (2022)
   PUBMED   36482889
  REMARK    Erratum:[Front Genet. 2023 Jul 10;14:1198975. PMID: 37496715]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3663)
  AUTHORS   Okazaki N, Kikuno R, Ohara R, Inamoto S, Koseki H, Hiraoka S, Saga
            Y, Nagase T, Ohara O and Koga H.
  TITLE     Prediction of the coding sequences of mouse homologues of KIAA
            gene: III. the complete nucleotide sequences of 500 mouse
            KIAA-homologous cDNAs identified by screening of terminal sequences
            of cDNA clones randomly sampled from size-fractionated libraries
  JOURNAL   DNA Res 10 (4), 167-180 (2003)
   PUBMED   14621295
REFERENCE   3  (bases 1 to 3663)
  AUTHORS   Stryke D, Kawamoto M, Huang CC, Johns SJ, King LA, Harper CA, Meng
            EC, Lee RE, Yee A, L'Italien L, Chuang PT, Young SG, Skarnes WC,
            Babbitt PC and Ferrin TE.
  TITLE     BayGenomics: a resource of insertional mutations in mouse embryonic
            stem cells
  JOURNAL   Nucleic Acids Res 31 (1), 278-281 (2003)
   PUBMED   12520002
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AL607152.21 and AL611926.12.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR17784649.138890.1,
                                           SRR13422598.1319734.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849374, SAMN00849375
                                           [ECO:0000348]
            ##Evidence-Data-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-248               AL607152.21        7158-7405           c
            249-571             AL611926.12        134761-135083       c
            572-704             AL611926.12        92102-92234         c
            705-848             AL611926.12        67025-67168         c
            849-3663            AL611926.12        58315-61129         c
FEATURES             Location/Qualifiers
     source          1..3663
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="11"
                     /map="11 3.91 cM"
     gene            1..3663
                     /gene="Nudcd3"
                     /gene_synonym="mKIAA1068"
                     /note="NudC domain containing 3"
                     /db_xref="GeneID:209586"
                     /db_xref="MGI:MGI:2144158"
     exon            1..248
                     /gene="Nudcd3"
                     /gene_synonym="mKIAA1068"
                     /inference="alignment:Splign:2.1.0"
     CDS             57..956
                     /gene="Nudcd3"
                     /gene_synonym="mKIAA1068"
                     /note="isoform 3 is encoded by transcript variant 3; nudC
                     domain-containing protein 3"
                     /codon_start=1
                     /product="nudC domain-containing protein 3 isoform 3"
                     /protein_id="NP_001406266.1"
                     /db_xref="GeneID:209586"
                     /db_xref="MGI:MGI:2144158"
                     /translation="

MEPGAAELYDQALLGILQHVGNVQDFLRVLFGFLYRKTDFYRLLRHPSDRMGFPPGAAQALVLQVFKTFDHMARQDDEKRKKELEEKIRKKEEEAKALPAAETEKVAVPVPVQEVEIDAAADLSGPQEVEKEEPPGSQDPEHTVTHGLEKAEAPGTVSSAAEGPKDPPVLPRIQEQFQKNPDSYNGAIRENYIWSQDYTDLEVRVPVPKHVMKGKQVSVALSSGTIRVAMVEENGERVLMEGKLTHKINTESSLWSLEPGRCVLVPSWKERPTTFPLAQTQSHGQLRGVKPSSLGTVLP"

     misc_feature    81..257
                     /gene="Nudcd3"
                     /gene_synonym="mKIAA1068"
                     /note="N-terminal conserved domain of Nudc; Region:
                     Nudc_N; pfam14050"
                     /db_xref="CDD:433675"
     misc_feature    414..485
                     /gene="Nudcd3"
                     /gene_synonym="mKIAA1068"
                     /note="propagated from UniProtKB/Swiss-Prot (Q8R1N4.3);
                     Region: Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite"
     misc_feature    612..>851
                     /gene="Nudcd3"
                     /gene_synonym="mKIAA1068"
                     /note="alpha-crystallin domain (ACD) found in
                     alpha-crystallin-type small heat shock proteins, and a
                     similar domain found in p23 (a cochaperone for Hsp90) and
                     in other p23-like proteins; Region:
                     alpha-crystallin-Hsps_p23-like; cl00175"
                     /db_xref="CDD:444727"
     exon            249..571
                     /gene="Nudcd3"
                     /gene_synonym="mKIAA1068"
                     /inference="alignment:Splign:2.1.0"
     exon            572..704
                     /gene="Nudcd3"
                     /gene_synonym="mKIAA1068"
                     /inference="alignment:Splign:2.1.0"
     exon            705..848
                     /gene="Nudcd3"
                     /gene_synonym="mKIAA1068"
                     /inference="alignment:Splign:2.1.0"
     exon            849..3663
                     /gene="Nudcd3"
                     /gene_synonym="mKIAA1068"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      

aatcagccggtgtgaggcggtgcccactgtgttcgcgtccctcgggcagcagagccatggagcccggggctgctgagctttatgaccaggccctgttgggcatcctgcagcacgtgggcaatgtccaggactttctgcgcgtgctcttcggctttctctaccgcaagaccgacttctaccgcctgctgcgccacccttcggaccgcatgggcttcccgcccggggccgcacaggccctggtgctgcaggtctttaaaacatttgatcacatggcccgccaggatgatgagaaaaggaagaaagaactagaagagaaaataagaaaaaaggaggaagaggccaaggccttgccagctgctgaaactgagaaggtagcggtgccggtcccagtgcaggaggtagagatcgatgctgctgcagacttgagtgggcctcaggaagtagagaaggaggagcccccaggctcccaggaccccgagcacacagtgacccatggcctggagaaggcggaagctccaggaacagttagcagtgctgctgaaggccctaaggaccctcctgtgctccccaggattcaggagcagttccagaaaaatcctgacagttacaacggtgccatccgtgagaactacatctggtcgcaagactacaccgacctggaggtcagggtgcccgtgcccaagcatgtgatgaaggggaagcaggtctctgtggcccttagcagtggcaccatccgagtggccatggtggaagagaatggagagcgtgtcctcatggaggggaagctcactcacaagatcaacaccgagagctccctctggagccttgagcccggcaggtgtgttttggtgccttcctggaaggaacgtcccacaacattcccgttggcccaaactcaatcccacgggcagctgcgaggagtaaagccatcctcactgggcacagtgcttccctgaatagaaatgaggttccgttactaaggaaggaaagggatagaaatgctggtgagtcatcggcacagatcgggggatgctgaggtaagtttattcacaccgagggtgaagtttttctgcgaggacattttgggagcactgttcagtcagtgacaatctggggtccctctgggaaattattgtgttctgggaccaggcaggtaaaggaggacctggaaaatgagagtgcatccaggaaatggtgaggtcacagtgaccttggaaagggccacctcattttgccccaacggttcagagtgactttctaagccactgagaaaggtggtggccaggaggcagcaagcagtttccttgaacagaaggtgctgtctttagcagtgcccatgccctgtcagtaaggagaggtcagtgggagatgggacctcacagggtcctaagagcttgatgcttatgtgttaatgtgacagtgtgggaaggcctggaatgagagggaatgttcttgcaagatacctgcaggtgggccacatacacacctgggttcctcaggagacactagacagggtccttagcgaagtagagaggaccagggaagcaggccaggctgctacttgagaagacttacttagtcttagaaagtaagtcagggtacagggccaacacagtggtccttactcttaaatgattcagaaaaaagcattatttattatgttttatgcaaacacatacagagtaggacagttgctaaatgcctgtgtggctctctgtactttcagcaatgtgtaaatttgaagttttttgcaaataagaaatgagtagtgttacaaacatacaaggaaactcagcatcactagggaaataaagtcaaaattacagtgagatgccttgtatacctgtgagagtggctgccaagaagcccatagtgctcaatttggaggagctgtgggaccctgaacgcctcactgctactatgagtgccaggtggtggacatagccagtgtgcccacattgcagccctaatgacctgctctgtgctcccaagaggaggaaacgcacacatctttacaacagcttcctacccaaccaccaaaccctaggaacacctacacggccatggacagatagtgatcacctacatcatgggatagtcttgccaagcatcatagcccacaggatccagaaaggaagcgtgtatacaagcccacaagctgtggtgttcaggggaagacatcctggacctggacaagctggatggcaagatgagcaatgcaaaatgaagtggagggaaggcctgggtgtgggtgggttgtagtggaggctggaggagactaaattgcaacagggtgagttttactgtgtgcaaactacacctcctcaagtctgacttgttacaaagtaacaaaatgttaaaacaaaaacagctaatttaagcaaaccatgggactacttttgccagggtgtggtctttagccaggaacccttgaaatctcttccatgagcatttttcctctgttctcacacaactcagattctgtcttcagtatcaagaataccctaccctaccctcggagacctgagtgtattctaaccactttaagtagtttatttggaagattaagtgcccaaagtgtcttacctgagttccctaggggtattactccaaggaagtcagtgatgctcagaagaacgtgtcagctaagacttctgggacatgaaggtatttaaaaagtcaaggctaggtcctggctgtgagggtaaggagccagacagcacagcacatgaaatgcttcaaggaagctttgtggcaaacaaaggaggccaggccaaggtaggggaagatactcatgagccgtcactaacactgcagcctcacttaacccttgactgcccactcagaatagtcacagaagctttggaaatgacagaacctttggtatggtctcctgccccagattcaagagcatcctgaaccttagggcagaggtcactgagaaaaatactgaaccatgtatacttgtgtatagccaggcaaaagaataacaagctacggcaccctcgaaaatggctatgacaaaaacaaaacaacaacaacaaaactaaatatccatgagggagtagagggctggatcctttccttgtgcagtaccaggatgtggaaggagtccagctccagtgggaaacgatttggtgctttcttgagacctaaagtaccatgtgagccagcaattccattcctaggtaaataccaaaggaagggaaaacagaaacccttgcacatagcagcattattcacatagccaaaagggggagaatggataacaggctgtggttaattcatccagtggaatgctcctcagcatggagaggaatgaagttctgatatgtgccacaacactgatgaccttcaaaaaccttataataagtgaaaggagccaacacagagcaatgtaaggtttcacttgtgtgaaatccaatgagacaaaagcatcagtaattgtgccggaggtgtcagggaagatatttaggagattttattatggtaagatgaagagtaattacatctggctatagggcttctttttggagtgatgtttcaggatacatatgtggttagttgcataccatcatgggtgtaccaattgccattgaactgttgacttttgaaaaaaaaagtgttatgtaatttcacaataaaaaattgttttaaaaataa

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