2024-04-29 07:22:15, GGRNA.v2 : RefSeq release 222 (Jan, 2024)
LOCUS NM_001418481 931 bp mRNA linear ROD 24-SEP-2023 DEFINITION Mus musculus endoplasmic reticulum oxidoreductase 1 beta (Ero1b), transcript variant 5, mRNA. ACCESSION NM_001418481 VERSION NM_001418481.1 KEYWORDS RefSeq. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 931) AUTHORS Parveen N, Wang JK, Bhattacharya S, Cuala J, Rajkumar MS, Butler AE, Wu X, Shih HP, Georgia SK and Dhawan S. TITLE DNA Methylation-Dependent Restriction of Tyrosine Hydroxylase Contributes to Pancreatic beta-Cell Heterogeneity JOURNAL Diabetes 72 (5), 575-589 (2023) PUBMED 36607262 REMARK Erratum:[Diabetes. 2023 Sep 08;:. PMID: 37683666] REFERENCE 2 (bases 1 to 931) AUTHORS Jang I, Pottekat A, Poothong J, Yong J, Lagunas-Acosta J, Charbono A, Chen Z, Scheuner DL, Liu M, Itkin-Ansari P, Arvan P and Kaufman RJ. TITLE PDIA1/P4HB is required for efficient proinsulin maturation and ss cell health in response to diet induced obesity JOURNAL Elife 8, e44528 (2019) PUBMED 31184304 REMARK Publication Status: Online-Only REFERENCE 3 (bases 1 to 931) AUTHORS Flodby P, Li C, Liu Y, Wang H, Marconett CN, Laird-Offringa IA, Minoo P, Lee AS and Zhou B. TITLE The 78-kD Glucose-Regulated Protein Regulates Endoplasmic Reticulum Homeostasis and Distal Epithelial Cell Survival during Lung Development JOURNAL Am J Respir Cell Mol Biol 55 (1), 135-149 (2016) PUBMED 26816051 REFERENCE 4 (bases 1 to 931) AUTHORS Wang DY, Abbasi C, El-Rass S, Li JY, Dawood F, Naito K, Sharma P, Bousette N, Singh S, Backx PH, Cox B, Wen XY, Liu PP and Gramolini AO. TITLE Endoplasmic reticulum resident protein 44 (ERp44) deficiency in mice and zebrafish leads to cardiac developmental and functional defects JOURNAL J Am Heart Assoc 3 (5), e001018 (2014) PUBMED 25332179 REMARK Publication Status: Online-Only REFERENCE 5 (bases 1 to 931) AUTHORS Awazawa M, Futami T, Sakada M, Kaneko K, Ohsugi M, Nakaya K, Terai A, Suzuki R, Koike M, Uchiyama Y, Kadowaki T and Ueki K. TITLE Deregulation of pancreas-specific oxidoreductin ERO1beta in the pathogenesis of diabetes mellitus JOURNAL Mol Cell Biol 34 (7), 1290-1299 (2014) PUBMED 24469402 REMARK GeneRIF: in diabetic model mice, ERO1beta expression is paradoxically decreased in beta cells despite the indications of increased ER stress REFERENCE 6 (bases 1 to 931) AUTHORS Khoo C, Yang J, Rajpal G, Wang Y, Liu J, Arvan P and Stoffers DA. TITLE Endoplasmic reticulum oxidoreductin-1-like beta (ERO1lbeta) regulates susceptibility to endoplasmic reticulum stress and is induced by insulin flux in beta-cells JOURNAL Endocrinology 152 (7), 2599-2608 (2011) PUBMED 21540283 REMARK GeneRIF: Several lines of evidence suggest that ERO1lbeta is involved in maintaining insulin content of pancreatic beta cells and in regulating beta cell survival during ER oxidative stress. REFERENCE 7 (bases 1 to 931) AUTHORS Zito E, Melo EP, Yang Y, Wahlander A, Neubert TA and Ron D. TITLE Oxidative protein folding by an endoplasmic reticulum-localized peroxiredoxin JOURNAL Mol Cell 40 (5), 787-797 (2010) PUBMED 21145486 REFERENCE 8 (bases 1 to 931) AUTHORS Appenzeller-Herzog C, Riemer J, Zito E, Chin KT, Ron D, Spiess M and Ellgaard L. TITLE Disulphide production by Ero1alpha-PDI relay is rapid and effectively regulated JOURNAL EMBO J 29 (19), 3318-3329 (2010) PUBMED 20802462 REFERENCE 9 (bases 1 to 931) AUTHORS Zito E, Chin KT, Blais J, Harding HP and Ron D. TITLE ERO1-beta, a pancreas-specific disulfide oxidase, promotes insulin biogenesis and glucose homeostasis JOURNAL J Cell Biol 188 (6), 821-832 (2010) PUBMED 20308425 REMARK GeneRIF: An unexpectedly selective function for ERO1-beta in oxidative protein folding in insulin-producing cells that is required for glucose homeostasis in vivo. Erratum:[J Cell Biol. 2010 May 17;189(4):769] REFERENCE 10 (bases 1 to 931) AUTHORS Aksu S, Koczan D, Renne U, Thiesen HJ and Brockmann GA. TITLE Differentially expressed genes in adipose tissues of high body weight-selected (obese) and unselected (lean) mouse lines JOURNAL J Appl Genet 48 (2), 133-143 (2007) PUBMED 17495347 COMMENT VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from CT954220.7. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications. ##Evidence-Data-START## Transcript exon combination :: SRR13422601.1213110.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN00849374, SAMN00849375 [ECO:0000348] ##Evidence-Data-END## PRIMARY REFSEQ_SPAN PRIMARY_IDENTIFIER PRIMARY_SPAN COMP 1-271 CT954220.7 98193-98463 272-391 CT954220.7 107105-107224 392-475 CT954220.7 111461-111544 476-517 CT954220.7 112659-112700 518-600 CT954220.7 113954-114036 601-674 CT954220.7 115822-115895 675-795 CT954220.7 123046-123166 796-842 CT954220.7 123270-123316 843-931 CT954220.7 125793-125881 FEATURES Location/Qualifiers source 1..931 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6" /db_xref="taxon:10090" /chromosome="13" /map="13 5.07 cM" gene 1..931 /gene="Ero1b" /gene_synonym="1300013B24Rik; 1700065B09Rik; ero1-beta; Ero1lb" /note="endoplasmic reticulum oxidoreductase 1 beta" /db_xref="GeneID:67475" /db_xref="MGI:MGI:1914725" exon 1..271 /gene="Ero1b" /gene_synonym="1300013B24Rik; 1700065B09Rik; ero1-beta; Ero1lb" /inference="alignment:Splign:2.1.0" CDS 170..883 /gene="Ero1b" /gene_synonym="1300013B24Rik; 1700065B09Rik; ero1-beta; Ero1lb" /note="isoform 5 precursor is encoded by transcript variant 5; ERO1-like protein beta; endoplasmic oxidoreductase 1 beta; ERO1-L-beta; oxidoreductin-1-L-beta; endoplasmic oxidoreductin-1-like protein B; endoplasmic reticulum oxidoreductin-1-like protein B; endoplasmic reticulum oxidoreductase beta; ERO1-like beta" /codon_start=1 /product="ERO1-like protein beta isoform 5 precursor" /protein_id="NP_001405410.1" /db_xref="GeneID:67475" /db_xref="MGI:MGI:1914725" /translation="
MSPGFRRAVTGQGAAAAVQLLVTLSFLSSLVKTQVTGVLDDCLCDIDSIDKFNTYKIFPKIKKLQERDYFRYYKVNLKRPCPFWAEDGHCSIKDCHVEPCPESKIPVGIKAGRSNKYSQAANSTKELDDCEQANKLGAINSTLSNESKEAFIDWARYDDSQDHFCELDDERSPAAQYVDLLLNPERYTGYKGSSAWRVWNSIYEENCFKPRSVYRPLNPLAPSRGEDDGELKLLCLL"
sig_peptide 170..268 /gene="Ero1b" /gene_synonym="1300013B24Rik; 1700065B09Rik; ero1-beta; Ero1lb" /inference="COORDINATES: ab initio prediction:SignalP:4.0" misc_feature 335..>877 /gene="Ero1b" /gene_synonym="1300013B24Rik; 1700065B09Rik; ero1-beta; Ero1lb" /note="Endoplasmic Reticulum Oxidoreductin 1 (ERO1); Region: ERO1; cl19883" /db_xref="CDD:450398" exon 272..391 /gene="Ero1b" /gene_synonym="1300013B24Rik; 1700065B09Rik; ero1-beta; Ero1lb" /inference="alignment:Splign:2.1.0" exon 392..475 /gene="Ero1b" /gene_synonym="1300013B24Rik; 1700065B09Rik; ero1-beta; Ero1lb" /inference="alignment:Splign:2.1.0" exon 476..517 /gene="Ero1b" /gene_synonym="1300013B24Rik; 1700065B09Rik; ero1-beta; Ero1lb" /inference="alignment:Splign:2.1.0" exon 518..600 /gene="Ero1b" /gene_synonym="1300013B24Rik; 1700065B09Rik; ero1-beta; Ero1lb" /inference="alignment:Splign:2.1.0" exon 601..674 /gene="Ero1b" /gene_synonym="1300013B24Rik; 1700065B09Rik; ero1-beta; Ero1lb" /inference="alignment:Splign:2.1.0" exon 675..795 /gene="Ero1b" /gene_synonym="1300013B24Rik; 1700065B09Rik; ero1-beta; Ero1lb" /inference="alignment:Splign:2.1.0" exon 796..842 /gene="Ero1b" /gene_synonym="1300013B24Rik; 1700065B09Rik; ero1-beta; Ero1lb" /inference="alignment:Splign:2.1.0" exon 843..931 /gene="Ero1b" /gene_synonym="1300013B24Rik; 1700065B09Rik; ero1-beta; Ero1lb" /inference="alignment:Splign:2.1.0" ORIGIN
agtcgctgctgctgcgaacggtagagtgttccttgcccgagaccggcgctcagaccccgggtcctggaggctcccggctcccaggcactgccccctgctgtcgtcgtcgcggcgggccgtcgttccccagccccgatcggccgaggcgacggcagcggccgaggtcaccatgagtccggggttccgccgggccgttactgggcagggggcggcggccgcggtgcaactgcttgtcaccctgagcttcctctcaagtctggtcaagactcaggtgactggagttctggatgattgcttatgtgacattgacagcattgataaattcaacacctacaaaatctttcccaaaataaagaagttacaagaacgagactattttcgttattacaaggttaatctgaaacgaccatgtcctttctgggcagaagatggccactgctcaataaaagactgtcatgtggagccctgtccagaaagtaaaattccagttggaattaaagccgggcgttcaaataagtactcgcaagcagcaaacagcaccaaagaactggatgactgtgagcaggctaacaaactgggcgccatcaacagcacgctaagtaacgaaagcaaagaagcgttcattgactgggcgagatatgatgattcgcaggaccacttttgtgaacttgatgatgagcggtctcctgctgcacagtatgtggacctgctgctgaacccggaacggtacactggctacaagggctcctcagcatggagggtgtggaacagcatctatgaagaaaactgcttcaagcctcgatctgtttatcgtcctttaaatcctttggcgcccagcagaggggaagatgatggtgagttgaaactcttgtgtttactttaaccatgaaagaagtctttttactattaaatatttggtgtttttctttca
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Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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