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2024-05-07 03:59:46, GGRNA.v2 : RefSeq release 222 (Jan, 2024)

LOCUS       NM_001405234            5228 bp    mRNA    linear   ROD 02-OCT-2023
DEFINITION  Mus musculus histone deacetylase 5 (Hdac5), transcript variant 9,
            mRNA.
ACCESSION   NM_001405234
VERSION     NM_001405234.1
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 5228)
  AUTHORS   Zhu C, Piao Z and Jin L.
  TITLE     HDAC5 inhibition attenuates ventricular remodeling and cardiac
            dysfunction
  JOURNAL   Orphanet J Rare Dis 18 (1), 266 (2023)
   PUBMED   37667300
  REMARK    GeneRIF: HDAC5 inhibition attenuates ventricular remodeling and
            cardiac dysfunction.
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5228)
  AUTHORS   Wang J, Wu S, Liu L, Pang Y, Li Z and Mu H.
  TITLE     HDAC5-Mediated Acetylation of p100 Suppresses Its Processing
  JOURNAL   Int Dent J 73 (3), 387-394 (2023)
   PUBMED   36156247
  REMARK    GeneRIF: HDAC5-Mediated Acetylation of p100 Suppresses Its
            Processing.
REFERENCE   3  (bases 1 to 5228)
  AUTHORS   Kim SJ, Hotta-Hirashima N, Asano F, Kitazono T, Iwasaki K, Nakata
            S, Komiya H, Asama N, Matsuoka T, Fujiyama T, Ikkyu A, Kakizaki M,
            Kanno S, Choi J, Kumar D, Tsukamoto T, Elhosainy A, Mizuno S,
            Miyazaki S, Tsuneoka Y, Sugiyama F, Takahashi S, Hayashi Y,
            Muratani M, Liu Q, Miyoshi C, Yanagisawa M and Funato H.
  TITLE     Kinase signalling in excitatory neurons regulates sleep quantity
            and depth
  JOURNAL   Nature 612 (7940), 512-518 (2022)
   PUBMED   36477539
REFERENCE   4  (bases 1 to 5228)
  AUTHORS   Huang S, Zheng X, Zhang X, Jin Z, Liu S, Fu L and Niu Y.
  TITLE     Exercise improves high-fat diet-induced metabolic disorder by
            promoting HDAC5 degradation through the ubiquitin-proteasome system
            in skeletal muscle
  JOURNAL   Appl Physiol Nutr Metab 47 (11), 1062-1074 (2022)
   PUBMED   35998371
  REMARK    GeneRIF: Exercise improves high-fat diet-induced metabolic disorder
            by promoting HDAC5 degradation through the ubiquitin-proteasome
            system in skeletal muscle.
REFERENCE   5  (bases 1 to 5228)
  AUTHORS   Sharma P, Karnam K, Mahale A, Sedmaki K, Krishna Venuganti V and
            Kulkarni OP.
  TITLE     HDAC5 RNA interference ameliorates acute renal injury by
            upregulating KLF2 and inhibiting NALP3 expression in a mouse model
            of oxalate nephropathy
  JOURNAL   Int Immunopharmacol 112, 109264 (2022)
   PUBMED   36183679
  REMARK    GeneRIF: HDAC5 RNA interference ameliorates acute renal injury by
            upregulating KLF2 and inhibiting NALP3 expression in a mouse model
            of oxalate nephropathy.
REFERENCE   6  (bases 1 to 5228)
  AUTHORS   Lemercier C, Verdel A, Galloo B, Curtet S, Brocard MP and Khochbin
            S.
  TITLE     mHDA1/HDAC5 histone deacetylase interacts with and represses MEF2A
            transcriptional activity
  JOURNAL   J Biol Chem 275 (20), 15594-15599 (2000)
   PUBMED   10748098
REFERENCE   7  (bases 1 to 5228)
  AUTHORS   Zhou X, Richon VM, Rifkind RA and Marks PA.
  TITLE     Identification of a transcriptional repressor related to the
            noncatalytic domain of histone deacetylases 4 and 5
  JOURNAL   Proc Natl Acad Sci U S A 97 (3), 1056-1061 (2000)
   PUBMED   10655483
REFERENCE   8  (bases 1 to 5228)
  AUTHORS   Kao HY, Downes M, Ordentlich P and Evans RM.
  TITLE     Isolation of a novel histone deacetylase reveals that class I and
            class II deacetylases promote SMRT-mediated repression
  JOURNAL   Genes Dev 14 (1), 55-66 (2000)
   PUBMED   10640276
REFERENCE   9  (bases 1 to 5228)
  AUTHORS   Grozinger CM, Hassig CA and Schreiber SL.
  TITLE     Three proteins define a class of human histone deacetylases related
            to yeast Hda1p
  JOURNAL   Proc Natl Acad Sci U S A 96 (9), 4868-4873 (1999)
   PUBMED   10220385
REFERENCE   10 (bases 1 to 5228)
  AUTHORS   Verdel A and Khochbin S.
  TITLE     Identification of a new family of higher eukaryotic histone
            deacetylases. Coordinate expression of differentiation-dependent
            chromatin modifiers
  JOURNAL   J Biol Chem 274 (4), 2440-2445 (1999)
   PUBMED   9891014
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AL954730.15.
            
            Publication Note:  This RefSeq record includes a subset of the
            publications that are available for this gene. Please see the Gene
            record to access additional publications.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR17784646.1034384.1 [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMN00849374,
                                           SAMN00849375 [ECO:0006172]
            ##Evidence-Data-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-138               AL954730.15        63571-63708         c
            139-360             AL954730.15        58300-58521         c
            361-497             AL954730.15        52711-52847         c
            498-569             AL954730.15        51982-52053         c
            570-829             AL954730.15        40473-40732         c
            830-971             AL954730.15        40196-40337         c
            972-1086            AL954730.15        39988-40102         c
            1087-1217           AL954730.15        39356-39486         c
            1218-1364           AL954730.15        39051-39197         c
            1365-1477           AL954730.15        38850-38962         c
            1478-1609           AL954730.15        38398-38529         c
            1610-1832           AL954730.15        37997-38219         c
            1833-2044           AL954730.15        36110-36321         c
            2045-2326           AL954730.15        35619-35900         c
            2327-2498           AL954730.15        34799-34970         c
            2499-2632           AL954730.15        33966-34099         c
            2633-2753           AL954730.15        33535-33655         c
            2754-2803           AL954730.15        33202-33251         c
            2804-2911           AL954730.15        32932-33039         c
            2912-2967           AL954730.15        32571-32626         c
            2968-3055           AL954730.15        32363-32450         c
            3056-3175           AL954730.15        31232-31351         c
            3176-3273           AL954730.15        30905-31002         c
            3274-3392           AL954730.15        30625-30743         c
            3393-3526           AL954730.15        30105-30238         c
            3527-3611           AL954730.15        29804-29888         c
            3612-3777           AL954730.15        29518-29683         c
            3778-5228           AL954730.15        27984-29434         c
FEATURES             Location/Qualifiers
     source          1..5228
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="11"
                     /map="11 65.82 cM"
     gene            1..5228
                     /gene="Hdac5"
                     /gene_synonym="HD5; Hdac4; mHDA1; mKIAA0600"
                     /note="histone deacetylase 5"
                     /db_xref="GeneID:15184"
                     /db_xref="MGI:MGI:1333784"
     exon            1..138
                     /gene="Hdac5"
                     /gene_synonym="HD5; Hdac4; mHDA1; mKIAA0600"
                     /inference="alignment:Splign:2.1.0"
     exon            139..360
                     /gene="Hdac5"
                     /gene_synonym="HD5; Hdac4; mHDA1; mKIAA0600"
                     /inference="alignment:Splign:2.1.0"
     misc_feature    158..160
                     /gene="Hdac5"
                     /gene_synonym="HD5; Hdac4; mHDA1; mKIAA0600"
                     /note="upstream in-frame stop codon"
     exon            361..497
                     /gene="Hdac5"
                     /gene_synonym="HD5; Hdac4; mHDA1; mKIAA0600"
                     /inference="alignment:Splign:2.1.0"
     CDS             449..3817
                     /gene="Hdac5"
                     /gene_synonym="HD5; Hdac4; mHDA1; mKIAA0600"
                     /EC_number="3.5.1.98"
                     /note="isoform 8 is encoded by transcript variant 9;
                     histone deacetylase mHDA1; histone deacetylase 4"
                     /codon_start=1
                     /product="histone deacetylase 5 isoform 8"
                     /protein_id="NP_001392163.1"
                     /db_xref="GeneID:15184"
                     /db_xref="MGI:MGI:1333784"
                     /translation="
MGPLPAPFSSPATGHPDGMSGREPSLEILPRTPLHSIPVAVEVKPVLPGAMPSSMGGGGGGSPSPVELRGALAGPMDPALREQQLQQELLVLKQQQQLQKQLLFAEFQKQHDHLTRQHEVQLQKHLKQQEMLAAKRQQELEQQRQREQQRQEELEKQRLEQQLLILRNKEKSKESAIASTEVKLRLQEFLLSKSKEPTPGGLNHSLPQHPKCWGAHHASLDQSSPPQSGPPGTPPSYKLPLLGPYDSRDDFPLRKTASEPNLKVRSRLKQKVAERRSSPLLRRKDGTVISTFKKRAVEITGTGPGVSSVCNSAPGSGPSSPNSSHSTIAENGFTGSVPNIPTEMIPQHRALPLDSSPNQFSLYTSPSLPNISLGLQATVTVTNSHLTASPKLSTQQEAERQALQSLRQGGTLTGKFMSTSSIPGCLLGVALEGDTSPHGHASLLQHVLLLEQARQQSTLIAVPLHGQSPLVTGERVATSMRTVGKLPRHRPLSRTQSSPLPQSPQALQQLVMQQQHQQFLEKQKQQQMQLGKILTKTGELSRQPTTHPEETEEELTEQQEALLGEGALTIPREGSTESESTQEDLEEEEEEEEEEEEDCIQVKDEDGESGPDEGPDLEESSAGYKKLFADAQQLQPLQVYQAPLSLATVPHQALGRTQSSPAAPGSMKSPTDQPTVVKHLFTTGVVYDTFMLKHQCMCGNTHVHPEHAGRIQSIWSRLQETGLLGKCERIRGRKATLDEIQTVHSEYHTLLYGTSPLNRQKLDSKKLLGPISQKMYAMLPCGGIGVDSDTVWNEMHSSSAVRMAVGCLVELAFKVAAGELKNGFAIIRPPGHHAEESTAMGFCFFNSVAITAKLLQQKLSVGKVLIVDWDIHHGNGTQQAFYNDPSVLYISLHRYDNGNFFPGSGAPEEVGGGPGVGYNVNVAWTGGVDPPIGDVEYLTAFRTVVMPIAQEFSPDVVLVSAGFDAVEGHLSPLGGYSVTARCFGHLTRQLMTLAGGRVVLALEGGHDLTAICDASEACVSALLSVELQPLDEAVLQQKPSVNAVATLEKVIEIQSKHWSCVQRFAAGLGCSLREAQTGEKEEAETVSAMALLSVGAEQAQAVATQEHSPRPAEEPMEQEPAL"
     misc_feature    677..937
                     /gene="Hdac5"
                     /gene_synonym="HD5; Hdac4; mHDA1; mKIAA0600"
                     /note="Glutamine-rich N-terminal helical domain of HDAC5,
                     a Class IIa histone deacetylase; Region:
                     ClassIIa_HDAC5_Gln-rich-N; cd10164"
                     /db_xref="CDD:197400"
     misc_feature    order(680..685,689..694,701..703,713..715,722..724,
                     734..736,743..745,755..760,764..769,776..781,788..790,
                     800..802,809..811,821..823,839..841,851..853)
                     /gene="Hdac5"
                     /gene_synonym="HD5; Hdac4; mHDA1; mKIAA0600"
                     /note="dimer interface A, C [polypeptide binding]; other
                     site"
                     /db_xref="CDD:197400"
     misc_feature    order(689..694,701..703,713..715,722..727,734..739,
                     743..748,755..760,764..769,776..784,788..796,800..805,
                     809..817,821..826,839..844,851..859)
                     /gene="Hdac5"
                     /gene_synonym="HD5; Hdac4; mHDA1; mKIAA0600"
                     /note="tetramer interface [polypeptide binding]; other
                     site"
                     /db_xref="CDD:197400"
     misc_feature    order(713..715,725..727,737..739,746..748,758..760,
                     767..769,779..784,791..796,803..805,815..817,824..826)
                     /gene="Hdac5"
                     /gene_synonym="HD5; Hdac4; mHDA1; mKIAA0600"
                     /note="dimer interface A, D [polypeptide binding]; other
                     site"
                     /db_xref="CDD:197400"
     misc_feature    order(767..769,779..781,812..817,824..826,842..844,
                     854..859)
                     /gene="Hdac5"
                     /gene_synonym="HD5; Hdac4; mHDA1; mKIAA0600"
                     /note="dimer interface A, B [polypeptide binding]; other
                     site"
                     /db_xref="CDD:197400"
     misc_feature    2483..3742
                     /gene="Hdac5"
                     /gene_synonym="HD5; Hdac4; mHDA1; mKIAA0600"
                     /note="Histone deacetylase 5; Region: HDAC5; cd10007"
                     /db_xref="CDD:212531"
     misc_feature    order(2942..2947,2969..2974,3056..3058,3062..3064,
                     3338..3340,3458..3460)
                     /gene="Hdac5"
                     /gene_synonym="HD5; Hdac4; mHDA1; mKIAA0600"
                     /note="putative active site [active]"
                     /db_xref="CDD:212531"
     exon            498..569
                     /gene="Hdac5"
                     /gene_synonym="HD5; Hdac4; mHDA1; mKIAA0600"
                     /inference="alignment:Splign:2.1.0"
     exon            570..829
                     /gene="Hdac5"
                     /gene_synonym="HD5; Hdac4; mHDA1; mKIAA0600"
                     /inference="alignment:Splign:2.1.0"
     exon            830..971
                     /gene="Hdac5"
                     /gene_synonym="HD5; Hdac4; mHDA1; mKIAA0600"
                     /inference="alignment:Splign:2.1.0"
     exon            972..1086
                     /gene="Hdac5"
                     /gene_synonym="HD5; Hdac4; mHDA1; mKIAA0600"
                     /inference="alignment:Splign:2.1.0"
     exon            1087..1217
                     /gene="Hdac5"
                     /gene_synonym="HD5; Hdac4; mHDA1; mKIAA0600"
                     /inference="alignment:Splign:2.1.0"
     exon            1218..1364
                     /gene="Hdac5"
                     /gene_synonym="HD5; Hdac4; mHDA1; mKIAA0600"
                     /inference="alignment:Splign:2.1.0"
     exon            1365..1477
                     /gene="Hdac5"
                     /gene_synonym="HD5; Hdac4; mHDA1; mKIAA0600"
                     /inference="alignment:Splign:2.1.0"
     exon            1478..1609
                     /gene="Hdac5"
                     /gene_synonym="HD5; Hdac4; mHDA1; mKIAA0600"
                     /inference="alignment:Splign:2.1.0"
     exon            1610..1832
                     /gene="Hdac5"
                     /gene_synonym="HD5; Hdac4; mHDA1; mKIAA0600"
                     /inference="alignment:Splign:2.1.0"
     exon            1833..2044
                     /gene="Hdac5"
                     /gene_synonym="HD5; Hdac4; mHDA1; mKIAA0600"
                     /inference="alignment:Splign:2.1.0"
     exon            2045..2326
                     /gene="Hdac5"
                     /gene_synonym="HD5; Hdac4; mHDA1; mKIAA0600"
                     /inference="alignment:Splign:2.1.0"
     exon            2327..2498
                     /gene="Hdac5"
                     /gene_synonym="HD5; Hdac4; mHDA1; mKIAA0600"
                     /inference="alignment:Splign:2.1.0"
     exon            2499..2632
                     /gene="Hdac5"
                     /gene_synonym="HD5; Hdac4; mHDA1; mKIAA0600"
                     /inference="alignment:Splign:2.1.0"
     exon            2633..2753
                     /gene="Hdac5"
                     /gene_synonym="HD5; Hdac4; mHDA1; mKIAA0600"
                     /inference="alignment:Splign:2.1.0"
     exon            2754..2803
                     /gene="Hdac5"
                     /gene_synonym="HD5; Hdac4; mHDA1; mKIAA0600"
                     /inference="alignment:Splign:2.1.0"
     exon            2804..2911
                     /gene="Hdac5"
                     /gene_synonym="HD5; Hdac4; mHDA1; mKIAA0600"
                     /inference="alignment:Splign:2.1.0"
     exon            2912..2967
                     /gene="Hdac5"
                     /gene_synonym="HD5; Hdac4; mHDA1; mKIAA0600"
                     /inference="alignment:Splign:2.1.0"
     exon            2968..3055
                     /gene="Hdac5"
                     /gene_synonym="HD5; Hdac4; mHDA1; mKIAA0600"
                     /inference="alignment:Splign:2.1.0"
     exon            3056..3175
                     /gene="Hdac5"
                     /gene_synonym="HD5; Hdac4; mHDA1; mKIAA0600"
                     /inference="alignment:Splign:2.1.0"
     exon            3176..3273
                     /gene="Hdac5"
                     /gene_synonym="HD5; Hdac4; mHDA1; mKIAA0600"
                     /inference="alignment:Splign:2.1.0"
     exon            3274..3392
                     /gene="Hdac5"
                     /gene_synonym="HD5; Hdac4; mHDA1; mKIAA0600"
                     /inference="alignment:Splign:2.1.0"
     exon            3393..3526
                     /gene="Hdac5"
                     /gene_synonym="HD5; Hdac4; mHDA1; mKIAA0600"
                     /inference="alignment:Splign:2.1.0"
     exon            3527..3611
                     /gene="Hdac5"
                     /gene_synonym="HD5; Hdac4; mHDA1; mKIAA0600"
                     /inference="alignment:Splign:2.1.0"
     exon            3612..3777
                     /gene="Hdac5"
                     /gene_synonym="HD5; Hdac4; mHDA1; mKIAA0600"
                     /inference="alignment:Splign:2.1.0"
     exon            3778..5228
                     /gene="Hdac5"
                     /gene_synonym="HD5; Hdac4; mHDA1; mKIAA0600"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
gttgttgttggtggcggcggcgagcggagccggaggagccgccgcaaagatggaggagccgtcgaggaggcgctgccgctgctgttgccgccgctgctgccgccgccgcccgcgaagccggagctcgagccgcagcggggatgccgttctgagtgcctgactgcctcgccccgccccgaaggatggccttggatgggcattagaggcactgcggccctgggctcgggctcctgtcccgtccgtctgtctgttatcgtctgtctctcttgacatcacagcagctccgccccctcccgtcccagcccccaacgtcagcttcctgcaggcccagagccggcatgaactctcccaacgagtcggaaagggggaagagagaagatccaggctggctgcttggtgtccagtccgttgtttgcccccagcagtggccaaagctgaccccagatgcatgggtcctctgcctgcacccttctctagtccagccactggccacccagatggcatgtcaggccgggaaccatccttggaaatcctgccacggactcctctgcacagcatccctgtggcagtggaggtgaagccggtgctgccaggagccatgcccagctccatggggggtggaggtggaggtagccccagccccgtggagcttcggggggctctggcgggccccatggaccctgcgctacgggagcagcaactgcagcaggagctcctggtcctcaagcagcagcagcagctccagaagcagctcctgttcgccgagttccagaagcagcacgaccacttgacgcggcagcacgaggtccagctgcagaagcacctcaagcagcaggagatgctggcggctaagaggcagcaggagctggagcagcagcggcagcgggagcagcagcggcaggaggagctggagaaacagcggctggagcagcagctgctcatcctgcgcaacaaggagaagagcaaagagagtgccatcgccagcaccgaggtaaagctgaggctccaggaattcctgttgtccaagtcaaaggagcccacgccaggcggcctcaaccattccctcccacagcaccccaaatgctggggagcccaccacgcttctttggaccagagttcccctccccagagcggccctcctgggacgcctccctcctacaaattgcctttgcttgggccctatgacagccgtgatgactttcccctccgtaaaacggcctcggaacccaacttaaaagtacgttcgaggctaaaacagaaggtagccgagaggagaagcagtcccctcctgcgtcgaaaggatggcactgttattagtacttttaagaagagagcagttgagatcaccggcacggggcctggggtgtcgtccgtgtgtaacagtgcgcccggctctggccccagctctcccaacagttcccacagcaccatcgctgagaacggctttactggctcagtccccaacatccccactgagatgatcccccagcaccgggccctccctctggacagttccccaaaccagttcagcctctatacgtctccttctctgcccaacatctccctagggctgcaggccactgtcactgtcaccaactcgcacctcaccgcctccccgaagctgtcaacacagcaggaggctgagaggcaggcccttcagtccctgcggcagggcggcacactgaccggcaagttcatgagcacatcctccatccctggctgcctgttgggagtggcactggagggtgacacaagcccccacgggcacgcttccctgctgcagcacgttttgctcctggagcaggcccggcaacagagcacgctcatagcagtgccgctccatgggcagtccccactggtgacgggtgaacgtgtggccaccagcatgaggacggtgggtaagctcccgaggcaccgacctctgagccgcactcagtcctccccgctgccgcagagtccccaggccctgcagcagctggtcatgcagcagcagcaccagcagttcctggagaagcagaagcagcagcagatgcagctgggcaagatccttaccaaaactggggagctgtcaaggcagcccaccactcacccggaggagacagaagaggagctgacggagcagcaggaggccttgctgggagagggggccctgaccattccccgggaaggctctacagaaagtgagagcacccaggaagacctagaagaggaggaggaggaggaggaggaggaagaggaggactgcattcaggtcaaggatgaggatggcgagagtggtcctgatgaaggccctgacttagaagagtccagtgctggttacaaaaagttgttcgcagatgcccagcagttacagcccctccaggtgtaccaggcacccctcagcctggccactgtgcctcatcaggccctgggccgcacccagtcctcacctgctgctcctgggagcatgaagagccccacagaccaacccactgtggtgaagcacctcttcaccacaggtgtggtctatgacacgttcatgctgaagcaccagtgtatgtgcggaaacacacacgtgcacccagagcacgccggccgcatccagagcatctggtcccggctgcaggaaactggtctgctcggcaagtgtgagcggatccggggtcgtaaagccacactggatgaaatccagaccgtgcactctgagtaccacaccctgctctatgggaccagcccccttaaccggcagaagctggacagcaagaagctgcttggccccatcagccagaagatgtacgccatgctgccctgtgggggcattggggtggacagtgacacggtgtggaatgagatgcactcctcaagtgccgtgcgaatggcagtgggctgcctggtggagctggccttcaaggtggctgcaggagagctcaagaatggatttgctatcatccggcccccaggacaccatgctgaggagtccacagccatgggattctgcttcttcaactccgtagccatcacagctaaactcctgcagcagaagctgagcgtgggcaaggtcctcatcgtggactgggatattcaccatggcaacggcacccagcaagcattctacaacgatccctctgtgctctacatctccctgcatcgctacgacaacgggaacttctttccaggctctggggctcctgaagaggttggtggagggccaggtgtggggtacaacgtaaatgtggcgtggacaggaggtgtggatccccccattggagatgtggaatacctgacagccttcaggacagtggtgatgcccattgcccaggagttctcacctgacgtcgtcctagtctccgctgggtttgatgctgttgaaggacatctgtctccactgggtggctattctgtcaccgccagatgttttggccacttgaccaggcagctcatgacactggctgggggccgggtggtgctggccctggagggaggccatgacttgaccgccatctgtgatgcctctgaggcctgtgtctcggctctgctcagcgtggagctgcagcccttggatgaagcagtcttgcagcaaaagcccagcgtcaatgcggttgccacactagagaaagtcatcgagatccagagcaaacactggagctgtgtacagaggtttgccgctggtctgggctgctcgctgcgggaggctcagacaggtgagaaagaggaggccgagactgtgagcgccatggccctgctttccgtgggggctgagcaggcccaggctgttgccactcaagagcacagccccaggccagcagaggagcccatggagcaggagcctgccctgtgacaccctggcccccatccctctgggcttcatcattgtgattttgtttattttttctattaaaaacaaaaagtcacacattcaacaacgtgtgccgtgtgggtctctcagcctcgcccgcctccaagctgtttcagaaccccctcccactacaagggccctgggtcagctttcgaatccattccttctatggggcattgggtgcagtacccactttgcccatgttgtatcccatacccaattccccgtactcttctaccgtggacagtgctccaggcagtactgccaactctggagctgcctgagatgggaacagtgattggtgcctggacttcagttggcttttggggaatgccttaatttgaaatctgcccctctccaccctcaggatgatgtactaccatttaagatgcagaatcgagggaaggtaggcgtccaccccaaactttcccttcctctctatctccctcaccattctgcagactctcctctttggcctcagcactgaagactcgtgcccaggatgtaggccttagacttgtggccaggcttcttgtctcttactcctgagtatcccaggagctcaaagggtaccgggtggtgtgcagcggggttagaaggggccaggaggacctgcgtatgcaggcaggttctccactttttttctattaaactctccgtcttgtgctggaccagtataaggaggggagaaggtagaccctgcatgggggcttcaggttcatgcaagcccctctgatgttctgggccagattttctccatccatcagcctgctgcaagcagaagggtcaagatccagctcccttctggagcctttttgctttgaaacctggggatcgtgaaagacagggtagatatagttctagaatagacagggccagaaccctgtctagaagccacccctgtcccccagaggtgttgggggggggggagtccagctctcagcaggaggttgttaggagctatccatcttttccagtagccttgtgtccagaggctggagcccacagacttccagtgaatgtggtctagcctgtaggaaaccaaagatgggaaatggctcctaaggggccaatttttcttcccctataccacatccccagggctcagctatctgtttccatattgtccgtatggggcctgagcagggctgagggagctggggagtcccaccactattagttttctgtgtgtttgcgtgctgtctgtatcatccttgcactgaaccagaggctgctcacctcccactctctccccgtaggctgatcttatcctgtgccaacccactcctgctttgtctccctggacatggattttagttcagtagtttgtatcccaacacatggtttttgtcttcgtgtaaataaacttatttgtggcagtgctttctgggaa
//

by @meso_cacase at DBCLS
This page is licensed under a Creative Commons Attribution 4.0 International License (CC BY 4.0).

If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596. [Full Text]