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2024-05-07 06:11:21, GGRNA.v2 : RefSeq release 222 (Jan, 2024)

LOCUS       NM_001361596            5209 bp    mRNA    linear   ROD 02-OCT-2023
DEFINITION  Mus musculus histone deacetylase 5 (Hdac5), transcript variant 6,
            mRNA.
ACCESSION   NM_001361596 XM_017314282
VERSION     NM_001361596.2
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 5209)
  AUTHORS   Zhu C, Piao Z and Jin L.
  TITLE     HDAC5 inhibition attenuates ventricular remodeling and cardiac
            dysfunction
  JOURNAL   Orphanet J Rare Dis 18 (1), 266 (2023)
   PUBMED   37667300
  REMARK    GeneRIF: HDAC5 inhibition attenuates ventricular remodeling and
            cardiac dysfunction.
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5209)
  AUTHORS   Wang J, Wu S, Liu L, Pang Y, Li Z and Mu H.
  TITLE     HDAC5-Mediated Acetylation of p100 Suppresses Its Processing
  JOURNAL   Int Dent J 73 (3), 387-394 (2023)
   PUBMED   36156247
  REMARK    GeneRIF: HDAC5-Mediated Acetylation of p100 Suppresses Its
            Processing.
REFERENCE   3  (bases 1 to 5209)
  AUTHORS   Kim SJ, Hotta-Hirashima N, Asano F, Kitazono T, Iwasaki K, Nakata
            S, Komiya H, Asama N, Matsuoka T, Fujiyama T, Ikkyu A, Kakizaki M,
            Kanno S, Choi J, Kumar D, Tsukamoto T, Elhosainy A, Mizuno S,
            Miyazaki S, Tsuneoka Y, Sugiyama F, Takahashi S, Hayashi Y,
            Muratani M, Liu Q, Miyoshi C, Yanagisawa M and Funato H.
  TITLE     Kinase signalling in excitatory neurons regulates sleep quantity
            and depth
  JOURNAL   Nature 612 (7940), 512-518 (2022)
   PUBMED   36477539
REFERENCE   4  (bases 1 to 5209)
  AUTHORS   Huang S, Zheng X, Zhang X, Jin Z, Liu S, Fu L and Niu Y.
  TITLE     Exercise improves high-fat diet-induced metabolic disorder by
            promoting HDAC5 degradation through the ubiquitin-proteasome system
            in skeletal muscle
  JOURNAL   Appl Physiol Nutr Metab 47 (11), 1062-1074 (2022)
   PUBMED   35998371
  REMARK    GeneRIF: Exercise improves high-fat diet-induced metabolic disorder
            by promoting HDAC5 degradation through the ubiquitin-proteasome
            system in skeletal muscle.
REFERENCE   5  (bases 1 to 5209)
  AUTHORS   Sharma P, Karnam K, Mahale A, Sedmaki K, Krishna Venuganti V and
            Kulkarni OP.
  TITLE     HDAC5 RNA interference ameliorates acute renal injury by
            upregulating KLF2 and inhibiting NALP3 expression in a mouse model
            of oxalate nephropathy
  JOURNAL   Int Immunopharmacol 112, 109264 (2022)
   PUBMED   36183679
  REMARK    GeneRIF: HDAC5 RNA interference ameliorates acute renal injury by
            upregulating KLF2 and inhibiting NALP3 expression in a mouse model
            of oxalate nephropathy.
REFERENCE   6  (bases 1 to 5209)
  AUTHORS   Lemercier C, Verdel A, Galloo B, Curtet S, Brocard MP and Khochbin
            S.
  TITLE     mHDA1/HDAC5 histone deacetylase interacts with and represses MEF2A
            transcriptional activity
  JOURNAL   J Biol Chem 275 (20), 15594-15599 (2000)
   PUBMED   10748098
REFERENCE   7  (bases 1 to 5209)
  AUTHORS   Zhou X, Richon VM, Rifkind RA and Marks PA.
  TITLE     Identification of a transcriptional repressor related to the
            noncatalytic domain of histone deacetylases 4 and 5
  JOURNAL   Proc Natl Acad Sci U S A 97 (3), 1056-1061 (2000)
   PUBMED   10655483
REFERENCE   8  (bases 1 to 5209)
  AUTHORS   Kao HY, Downes M, Ordentlich P and Evans RM.
  TITLE     Isolation of a novel histone deacetylase reveals that class I and
            class II deacetylases promote SMRT-mediated repression
  JOURNAL   Genes Dev 14 (1), 55-66 (2000)
   PUBMED   10640276
REFERENCE   9  (bases 1 to 5209)
  AUTHORS   Grozinger CM, Hassig CA and Schreiber SL.
  TITLE     Three proteins define a class of human histone deacetylases related
            to yeast Hda1p
  JOURNAL   Proc Natl Acad Sci U S A 96 (9), 4868-4873 (1999)
   PUBMED   10220385
REFERENCE   10 (bases 1 to 5209)
  AUTHORS   Verdel A and Khochbin S.
  TITLE     Identification of a new family of higher eukaryotic histone
            deacetylases. Coordinate expression of differentiation-dependent
            chromatin modifiers
  JOURNAL   J Biol Chem 274 (4), 2440-2445 (1999)
   PUBMED   9891014
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AL954730.15.
            
            On Apr 21, 2022 this sequence version replaced NM_001361596.1.
            
            Publication Note:  This RefSeq record includes a subset of the
            publications that are available for this gene. Please see the Gene
            record to access additional publications.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR7345562.935356.1,
                                           SRR1660815.260571.1 [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMN00849374,
                                           SAMN00849375 [ECO:0006172]
            ##Evidence-Data-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-138               AL954730.15        63571-63708         c
            139-360             AL954730.15        58300-58521         c
            361-435             AL954730.15        51982-52056         c
            436-547             AL954730.15        47491-47602         c
            548-807             AL954730.15        40473-40732         c
            808-952             AL954730.15        40196-40340         c
            953-1067            AL954730.15        39988-40102         c
            1068-1198           AL954730.15        39356-39486         c
            1199-1345           AL954730.15        39051-39197         c
            1346-1458           AL954730.15        38850-38962         c
            1459-1590           AL954730.15        38398-38529         c
            1591-1813           AL954730.15        37997-38219         c
            1814-2025           AL954730.15        36110-36321         c
            2026-2307           AL954730.15        35619-35900         c
            2308-2479           AL954730.15        34799-34970         c
            2480-2613           AL954730.15        33966-34099         c
            2614-2734           AL954730.15        33535-33655         c
            2735-2784           AL954730.15        33202-33251         c
            2785-2892           AL954730.15        32932-33039         c
            2893-2948           AL954730.15        32571-32626         c
            2949-3036           AL954730.15        32363-32450         c
            3037-3156           AL954730.15        31232-31351         c
            3157-3254           AL954730.15        30905-31002         c
            3255-3373           AL954730.15        30625-30743         c
            3374-3507           AL954730.15        30105-30238         c
            3508-3592           AL954730.15        29804-29888         c
            3593-3758           AL954730.15        29518-29683         c
            3759-5209           AL954730.15        27984-29434         c
FEATURES             Location/Qualifiers
     source          1..5209
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="11"
                     /map="11 65.82 cM"
     gene            1..5209
                     /gene="Hdac5"
                     /gene_synonym="HD5; Hdac4; mHDA1; mKIAA0600"
                     /note="histone deacetylase 5"
                     /db_xref="GeneID:15184"
                     /db_xref="MGI:MGI:1333784"
     exon            1..138
                     /gene="Hdac5"
                     /gene_synonym="HD5; Hdac4; mHDA1; mKIAA0600"
                     /inference="alignment:Splign:2.1.0"
     exon            139..360
                     /gene="Hdac5"
                     /gene_synonym="HD5; Hdac4; mHDA1; mKIAA0600"
                     /inference="alignment:Splign:2.1.0"
     exon            361..435
                     /gene="Hdac5"
                     /gene_synonym="HD5; Hdac4; mHDA1; mKIAA0600"
                     /inference="alignment:Splign:2.1.0"
     exon            436..547
                     /gene="Hdac5"
                     /gene_synonym="HD5; Hdac4; mHDA1; mKIAA0600"
                     /inference="alignment:Splign:2.1.0"
     misc_feature    544..546
                     /gene="Hdac5"
                     /gene_synonym="HD5; Hdac4; mHDA1; mKIAA0600"
                     /note="upstream in-frame stop codon"
     exon            548..807
                     /gene="Hdac5"
                     /gene_synonym="HD5; Hdac4; mHDA1; mKIAA0600"
                     /inference="alignment:Splign:2.1.0"
     CDS             577..3798
                     /gene="Hdac5"
                     /gene_synonym="HD5; Hdac4; mHDA1; mKIAA0600"
                     /EC_number="3.5.1.98"
                     /note="isoform 4 is encoded by transcript variant 6;
                     histone deacetylase mHDA1; histone deacetylase 4"
                     /codon_start=1
                     /product="histone deacetylase 5 isoform 4"
                     /protein_id="NP_001348525.1"
                     /db_xref="GeneID:15184"
                     /db_xref="MGI:MGI:1333784"
                     /translation="
MPSSMGGGGGGSPSPVELRGALAGPMDPALREQQLQQELLVLKQQQQLQKQLLFAEFQKQHDHLTRQHEVQLQKHLKQQQEMLAAKRQQELEQQRQREQQRQEELEKQRLEQQLLILRNKEKSKESAIASTEVKLRLQEFLLSKSKEPTPGGLNHSLPQHPKCWGAHHASLDQSSPPQSGPPGTPPSYKLPLLGPYDSRDDFPLRKTASEPNLKVRSRLKQKVAERRSSPLLRRKDGTVISTFKKRAVEITGTGPGVSSVCNSAPGSGPSSPNSSHSTIAENGFTGSVPNIPTEMIPQHRALPLDSSPNQFSLYTSPSLPNISLGLQATVTVTNSHLTASPKLSTQQEAERQALQSLRQGGTLTGKFMSTSSIPGCLLGVALEGDTSPHGHASLLQHVLLLEQARQQSTLIAVPLHGQSPLVTGERVATSMRTVGKLPRHRPLSRTQSSPLPQSPQALQQLVMQQQHQQFLEKQKQQQMQLGKILTKTGELSRQPTTHPEETEEELTEQQEALLGEGALTIPREGSTESESTQEDLEEEEEEEEEEEEDCIQVKDEDGESGPDEGPDLEESSAGYKKLFADAQQLQPLQVYQAPLSLATVPHQALGRTQSSPAAPGSMKSPTDQPTVVKHLFTTGVVYDTFMLKHQCMCGNTHVHPEHAGRIQSIWSRLQETGLLGKCERIRGRKATLDEIQTVHSEYHTLLYGTSPLNRQKLDSKKLLGPISQKMYAMLPCGGIGVDSDTVWNEMHSSSAVRMAVGCLVELAFKVAAGELKNGFAIIRPPGHHAEESTAMGFCFFNSVAITAKLLQQKLSVGKVLIVDWDIHHGNGTQQAFYNDPSVLYISLHRYDNGNFFPGSGAPEEVGGGPGVGYNVNVAWTGGVDPPIGDVEYLTAFRTVVMPIAQEFSPDVVLVSAGFDAVEGHLSPLGGYSVTARCFGHLTRQLMTLAGGRVVLALEGGHDLTAICDASEACVSALLSVELQPLDEAVLQQKPSVNAVATLEKVIEIQSKHWSCVQRFAAGLGCSLREAQTGEKEEAETVSAMALLSVGAEQAQAVATQEHSPRPAEEPMEQEPAL"
     misc_feature    655..918
                     /gene="Hdac5"
                     /gene_synonym="HD5; Hdac4; mHDA1; mKIAA0600"
                     /note="Glutamine-rich N-terminal helical domain of various
                     Class IIa histone deacetylases (HDAC4, HDAC5 and HDCA9);
                     Region: ClassIIa_HDAC_Gln-rich-N; cl25407"
                     /db_xref="CDD:421006"
     misc_feature    order(658..663,667..672,679..681,691..693,700..705,
                     712..717,721..726,733..738,742..747,754..762,766..774,
                     778..783,820..825,832..840)
                     /gene="Hdac5"
                     /gene_synonym="HD5; Hdac4; mHDA1; mKIAA0600"
                     /note="tetramer interface [polypeptide binding]; other
                     site"
                     /db_xref="CDD:197397"
     misc_feature    order(658..663,667..672,679..681,691..693,700..702,
                     712..714,721..723,733..738,742..747,754..759,766..768,
                     778..780,820..822,832..834)
                     /gene="Hdac5"
                     /gene_synonym="HD5; Hdac4; mHDA1; mKIAA0600"
                     /note="dimer interface A, C [polypeptide binding]; other
                     site"
                     /db_xref="CDD:197397"
     misc_feature    order(691..693,703..705,715..717,724..726,736..738,
                     745..747,757..762,769..774,781..783)
                     /gene="Hdac5"
                     /gene_synonym="HD5; Hdac4; mHDA1; mKIAA0600"
                     /note="dimer interface A, D [polypeptide binding]; other
                     site"
                     /db_xref="CDD:197397"
     misc_feature    2464..3723
                     /gene="Hdac5"
                     /gene_synonym="HD5; Hdac4; mHDA1; mKIAA0600"
                     /note="Histone deacetylase 5; Region: HDAC5; cd10007"
                     /db_xref="CDD:212531"
     misc_feature    order(2923..2928,2950..2955,3037..3039,3043..3045,
                     3319..3321,3439..3441)
                     /gene="Hdac5"
                     /gene_synonym="HD5; Hdac4; mHDA1; mKIAA0600"
                     /note="putative active site [active]"
                     /db_xref="CDD:212531"
     exon            808..952
                     /gene="Hdac5"
                     /gene_synonym="HD5; Hdac4; mHDA1; mKIAA0600"
                     /inference="alignment:Splign:2.1.0"
     exon            953..1067
                     /gene="Hdac5"
                     /gene_synonym="HD5; Hdac4; mHDA1; mKIAA0600"
                     /inference="alignment:Splign:2.1.0"
     exon            1068..1198
                     /gene="Hdac5"
                     /gene_synonym="HD5; Hdac4; mHDA1; mKIAA0600"
                     /inference="alignment:Splign:2.1.0"
     exon            1199..1345
                     /gene="Hdac5"
                     /gene_synonym="HD5; Hdac4; mHDA1; mKIAA0600"
                     /inference="alignment:Splign:2.1.0"
     exon            1346..1458
                     /gene="Hdac5"
                     /gene_synonym="HD5; Hdac4; mHDA1; mKIAA0600"
                     /inference="alignment:Splign:2.1.0"
     exon            1459..1590
                     /gene="Hdac5"
                     /gene_synonym="HD5; Hdac4; mHDA1; mKIAA0600"
                     /inference="alignment:Splign:2.1.0"
     exon            1591..1813
                     /gene="Hdac5"
                     /gene_synonym="HD5; Hdac4; mHDA1; mKIAA0600"
                     /inference="alignment:Splign:2.1.0"
     exon            1814..2025
                     /gene="Hdac5"
                     /gene_synonym="HD5; Hdac4; mHDA1; mKIAA0600"
                     /inference="alignment:Splign:2.1.0"
     exon            2026..2307
                     /gene="Hdac5"
                     /gene_synonym="HD5; Hdac4; mHDA1; mKIAA0600"
                     /inference="alignment:Splign:2.1.0"
     exon            2308..2479
                     /gene="Hdac5"
                     /gene_synonym="HD5; Hdac4; mHDA1; mKIAA0600"
                     /inference="alignment:Splign:2.1.0"
     exon            2480..2613
                     /gene="Hdac5"
                     /gene_synonym="HD5; Hdac4; mHDA1; mKIAA0600"
                     /inference="alignment:Splign:2.1.0"
     exon            2614..2734
                     /gene="Hdac5"
                     /gene_synonym="HD5; Hdac4; mHDA1; mKIAA0600"
                     /inference="alignment:Splign:2.1.0"
     exon            2735..2784
                     /gene="Hdac5"
                     /gene_synonym="HD5; Hdac4; mHDA1; mKIAA0600"
                     /inference="alignment:Splign:2.1.0"
     exon            2785..2892
                     /gene="Hdac5"
                     /gene_synonym="HD5; Hdac4; mHDA1; mKIAA0600"
                     /inference="alignment:Splign:2.1.0"
     exon            2893..2948
                     /gene="Hdac5"
                     /gene_synonym="HD5; Hdac4; mHDA1; mKIAA0600"
                     /inference="alignment:Splign:2.1.0"
     exon            2949..3036
                     /gene="Hdac5"
                     /gene_synonym="HD5; Hdac4; mHDA1; mKIAA0600"
                     /inference="alignment:Splign:2.1.0"
     exon            3037..3156
                     /gene="Hdac5"
                     /gene_synonym="HD5; Hdac4; mHDA1; mKIAA0600"
                     /inference="alignment:Splign:2.1.0"
     exon            3157..3254
                     /gene="Hdac5"
                     /gene_synonym="HD5; Hdac4; mHDA1; mKIAA0600"
                     /inference="alignment:Splign:2.1.0"
     exon            3255..3373
                     /gene="Hdac5"
                     /gene_synonym="HD5; Hdac4; mHDA1; mKIAA0600"
                     /inference="alignment:Splign:2.1.0"
     exon            3374..3507
                     /gene="Hdac5"
                     /gene_synonym="HD5; Hdac4; mHDA1; mKIAA0600"
                     /inference="alignment:Splign:2.1.0"
     exon            3508..3592
                     /gene="Hdac5"
                     /gene_synonym="HD5; Hdac4; mHDA1; mKIAA0600"
                     /inference="alignment:Splign:2.1.0"
     exon            3593..3758
                     /gene="Hdac5"
                     /gene_synonym="HD5; Hdac4; mHDA1; mKIAA0600"
                     /inference="alignment:Splign:2.1.0"
     exon            3759..5209
                     /gene="Hdac5"
                     /gene_synonym="HD5; Hdac4; mHDA1; mKIAA0600"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
gttgttgttggtggcggcggcgagcggagccggaggagccgccgcaaagatggaggagccgtcgaggaggcgctgccgctgctgttgccgccgctgctgccgccgccgcccgcgaagccggagctcgagccgcagcggggatgccgttctgagtgcctgactgcctcgccccgccccgaaggatggccttggatgggcattagaggcactgcggccctgggctcgggctcctgtcccgtccgtctgtctgttatcgtctgtctctcttgacatcacagcagctccgccccctcccgtcccagcccccaacgtcagcttcctgcaggcccagagccggcatgaactctcccaacgagtcggcagatggcatgtcaggccgggaaccatccttggaaatcctgccacggactcctctgcacagcatccctgtggcaggtgaccttggacaagctccctctgtggcctcactttctcctcctgcagctggggccgttgagttgctgagctcctgggccttttccttactgacattctgagggtctctgagtggaggtgaagccggtgctgccaggagccatgcccagctccatggggggtggaggtggaggtagccccagccccgtggagcttcggggggctctggcgggccccatggaccctgcgctacgggagcagcaactgcagcaggagctcctggtcctcaagcagcagcagcagctccagaagcagctcctgttcgccgagttccagaagcagcacgaccacttgacgcggcagcacgaggtccagctgcagaagcacctcaagcagcagcaggagatgctggcggctaagaggcagcaggagctggagcagcagcggcagcgggagcagcagcggcaggaggagctggagaaacagcggctggagcagcagctgctcatcctgcgcaacaaggagaagagcaaagagagtgccatcgccagcaccgaggtaaagctgaggctccaggaattcctgttgtccaagtcaaaggagcccacgccaggcggcctcaaccattccctcccacagcaccccaaatgctggggagcccaccacgcttctttggaccagagttcccctccccagagcggccctcctgggacgcctccctcctacaaattgcctttgcttgggccctatgacagccgtgatgactttcccctccgtaaaacggcctcggaacccaacttaaaagtacgttcgaggctaaaacagaaggtagccgagaggagaagcagtcccctcctgcgtcgaaaggatggcactgttattagtacttttaagaagagagcagttgagatcaccggcacggggcctggggtgtcgtccgtgtgtaacagtgcgcccggctctggccccagctctcccaacagttcccacagcaccatcgctgagaacggctttactggctcagtccccaacatccccactgagatgatcccccagcaccgggccctccctctggacagttccccaaaccagttcagcctctatacgtctccttctctgcccaacatctccctagggctgcaggccactgtcactgtcaccaactcgcacctcaccgcctccccgaagctgtcaacacagcaggaggctgagaggcaggcccttcagtccctgcggcagggcggcacactgaccggcaagttcatgagcacatcctccatccctggctgcctgttgggagtggcactggagggtgacacaagcccccacgggcacgcttccctgctgcagcacgttttgctcctggagcaggcccggcaacagagcacgctcatagcagtgccgctccatgggcagtccccactggtgacgggtgaacgtgtggccaccagcatgaggacggtgggtaagctcccgaggcaccgacctctgagccgcactcagtcctccccgctgccgcagagtccccaggccctgcagcagctggtcatgcagcagcagcaccagcagttcctggagaagcagaagcagcagcagatgcagctgggcaagatccttaccaaaactggggagctgtcaaggcagcccaccactcacccggaggagacagaagaggagctgacggagcagcaggaggccttgctgggagagggggccctgaccattccccgggaaggctctacagaaagtgagagcacccaggaagacctagaagaggaggaggaggaggaggaggaggaagaggaggactgcattcaggtcaaggatgaggatggcgagagtggtcctgatgaaggccctgacttagaagagtccagtgctggttacaaaaagttgttcgcagatgcccagcagttacagcccctccaggtgtaccaggcacccctcagcctggccactgtgcctcatcaggccctgggccgcacccagtcctcacctgctgctcctgggagcatgaagagccccacagaccaacccactgtggtgaagcacctcttcaccacaggtgtggtctatgacacgttcatgctgaagcaccagtgtatgtgcggaaacacacacgtgcacccagagcacgccggccgcatccagagcatctggtcccggctgcaggaaactggtctgctcggcaagtgtgagcggatccggggtcgtaaagccacactggatgaaatccagaccgtgcactctgagtaccacaccctgctctatgggaccagcccccttaaccggcagaagctggacagcaagaagctgcttggccccatcagccagaagatgtacgccatgctgccctgtgggggcattggggtggacagtgacacggtgtggaatgagatgcactcctcaagtgccgtgcgaatggcagtgggctgcctggtggagctggccttcaaggtggctgcaggagagctcaagaatggatttgctatcatccggcccccaggacaccatgctgaggagtccacagccatgggattctgcttcttcaactccgtagccatcacagctaaactcctgcagcagaagctgagcgtgggcaaggtcctcatcgtggactgggatattcaccatggcaacggcacccagcaagcattctacaacgatccctctgtgctctacatctccctgcatcgctacgacaacgggaacttctttccaggctctggggctcctgaagaggttggtggagggccaggtgtggggtacaacgtaaatgtggcgtggacaggaggtgtggatccccccattggagatgtggaatacctgacagccttcaggacagtggtgatgcccattgcccaggagttctcacctgacgtcgtcctagtctccgctgggtttgatgctgttgaaggacatctgtctccactgggtggctattctgtcaccgccagatgttttggccacttgaccaggcagctcatgacactggctgggggccgggtggtgctggccctggagggaggccatgacttgaccgccatctgtgatgcctctgaggcctgtgtctcggctctgctcagcgtggagctgcagcccttggatgaagcagtcttgcagcaaaagcccagcgtcaatgcggttgccacactagagaaagtcatcgagatccagagcaaacactggagctgtgtacagaggtttgccgctggtctgggctgctcgctgcgggaggctcagacaggtgagaaagaggaggccgagactgtgagcgccatggccctgctttccgtgggggctgagcaggcccaggctgttgccactcaagagcacagccccaggccagcagaggagcccatggagcaggagcctgccctgtgacaccctggcccccatccctctgggcttcatcattgtgattttgtttattttttctattaaaaacaaaaagtcacacattcaacaacgtgtgccgtgtgggtctctcagcctcgcccgcctccaagctgtttcagaaccccctcccactacaagggccctgggtcagctttcgaatccattccttctatggggcattgggtgcagtacccactttgcccatgttgtatcccatacccaattccccgtactcttctaccgtggacagtgctccaggcagtactgccaactctggagctgcctgagatgggaacagtgattggtgcctggacttcagttggcttttggggaatgccttaatttgaaatctgcccctctccaccctcaggatgatgtactaccatttaagatgcagaatcgagggaaggtaggcgtccaccccaaactttcccttcctctctatctccctcaccattctgcagactctcctctttggcctcagcactgaagactcgtgcccaggatgtaggccttagacttgtggccaggcttcttgtctcttactcctgagtatcccaggagctcaaagggtaccgggtggtgtgcagcggggttagaaggggccaggaggacctgcgtatgcaggcaggttctccactttttttctattaaactctccgtcttgtgctggaccagtataaggaggggagaaggtagaccctgcatgggggcttcaggttcatgcaagcccctctgatgttctgggccagattttctccatccatcagcctgctgcaagcagaagggtcaagatccagctcccttctggagcctttttgctttgaaacctggggatcgtgaaagacagggtagatatagttctagaatagacagggccagaaccctgtctagaagccacccctgtcccccagaggtgttgggggggggggagtccagctctcagcaggaggttgttaggagctatccatcttttccagtagccttgtgtccagaggctggagcccacagacttccagtgaatgtggtctagcctgtaggaaaccaaagatgggaaatggctcctaaggggccaatttttcttcccctataccacatccccagggctcagctatctgtttccatattgtccgtatggggcctgagcagggctgagggagctggggagtcccaccactattagttttctgtgtgtttgcgtgctgtctgtatcatccttgcactgaaccagaggctgctcacctcccactctctccccgtaggctgatcttatcctgtgccaacccactcctgctttgtctccctggacatggattttagttcagtagtttgtatcccaacacatggtttttgtcttcgtgtaaataaacttatttgtggcagtgctttctgggaa
//

by @meso_cacase at DBCLS
This page is licensed under a Creative Commons Attribution 4.0 International License (CC BY 4.0).

If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596. [Full Text]