LOCUS       NM_001324471            1582 bp    mRNA    linear   ROD 12-DEC-2023
DEFINITION  Mus musculus PRAME like 51 (Pramel51), transcript variant 2, mRNA.
ACCESSION   NM_001324471 XM_006515317
VERSION     NM_001324471.1
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1582)
  AUTHORS   Wan Y, Yang S, Li T, Cai Y, Wu X, Zhang M, Muhammad T, Huang T, Lv
            Y, Chan WY, Lu G, Li J, Sha QQ, Chen ZJ and Liu H.
  TITLE     LSM14B is essential for oocyte meiotic maturation by regulating
            maternal mRNA storage and clearance
  JOURNAL   Nucleic Acids Res 51 (21), 11652-11667 (2023)
   PUBMED   37889087
REFERENCE   2  (bases 1 to 1582)
  AUTHORS   Evsikov AV, Graber JH, Brockman JM, Hampl A, Holbrook AE, Singh P,
            Eppig JJ, Solter D and Knowles BB.
  TITLE     Cracking the egg: molecular dynamics and evolutionary aspects of
            the transition from the fully grown oocyte to embryo
  JOURNAL   Genes Dev 20 (19), 2713-2727 (2006)
   PUBMED   17015433
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            CA560787.1, BC094894.1 and CT030175.7.
            
            On May 6, 2016 this sequence version replaced XM_006515317.2.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC094894.1, AK139576.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849374, SAMN01164134
                                           [ECO:0000348]
            ##Evidence-Data-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-127               CA560787.1         1-127
            128-1218            BC094894.1         1-1091
            1219-1219           CT030175.7         62118-62118
            1220-1568           BC094894.1         1093-1441
            1569-1582           CT030175.7         62468-62481
FEATURES             Location/Qualifiers
     source          1..1582
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="12"
                     /map="12 42.35 cM"
     gene            1..1582
                     /gene="Pramel51"
                     /gene_synonym="Gm10436"
                     /note="PRAME like 51"
                     /db_xref="GeneID:100039315"
                     /db_xref="MGI:MGI:3704393"
     exon            1..155
                     /gene="Pramel51"
                     /gene_synonym="Gm10436"
                     /inference="alignment:Splign:2.1.0"
     misc_feature    130..132
                     /gene="Pramel51"
                     /gene_synonym="Gm10436"
                     /note="upstream in-frame stop codon"
     exon            156..731
                     /gene="Pramel51"
                     /gene_synonym="Gm10436"
                     /inference="alignment:Splign:2.1.0"
     CDS             325..1302
                     /gene="Pramel51"
                     /gene_synonym="Gm10436"
                     /note="isoform 2 is encoded by transcript variant 2;
                     oogenesin like"
                     /codon_start=1
                     /product="oogenesin like isoform 2"
                     /protein_id="NP_001311400.1"
                     /db_xref="CCDS:CCDS88383.1"
                     /db_xref="GeneID:100039315"
                     /db_xref="MGI:MGI:3704393"
                     /translation="

MKGRLDESTTYLLQWAQQRKDSIHLFCRKLLIEGLTKASVIEIFKTVHADCIQELILRCICIEELAFLNPYLKLMKSLFTLTLDHIIGTFTLGDSEKLDEETIFSLISQLPTLHCLQKLYINDVPFIKGNLKEYLRCLKKPLETLCISNCDLSQSDLDCLPFCLNICELKHLHISDIYLCDLLLEPLGFLLERVGDTLKTLELVSCCIVDFQFSALLPALSQCSHLREVTFYDNDVSLPFLKQLLHHTALLSQLIYECYPAPIECYDDSGVILTHRLESFCPELLDILRAKRQLHSVSFQTTKCSKCGGCYIYDRHTQCCRFVEL"

     exon            732..1582
                     /gene="Pramel51"
                     /gene_synonym="Gm10436"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      

tagctgggagggtgtggctacaaagggagggttcagctgaaaggtatataatgattcatagcaaggagaggaagtatagattaggtctcttggagcctggagtcacagctttcccttgcccgaatatggtgatctgtctccattgtccagatcagtaggtgcaaactcagagtaattaattggagagaagatgacttgaagatatgggctggatcccatgaaggtgaaggcttaccagatttcaggacagagaagcagccaattgagaacagtcctggctgtgaggtgaagaaagaattgaaggtgacgactgaagtccttcgcatgaagggcagacttgatgaatctaccacatacttgttgcagtgggcccagcagagaaaagattctattcatctattctgtagaaagctactaattgaaggcttaaccaaagcctcagtgatagaaatcttcaaaactgtacacgcagactgtatacaggagcttatcctaagatgtatctgcatagaagagttggcttttcttaatccctacctgaaactgatgaaaagtcttttcacactcacactagatcacatcataggtaccttcactttgggtgattctgaaaagcttgatgaggagacaatattcagcttgatttctcaacttcccacactccactgtctccagaaactctacataaatgatgtcccttttataaaaggcaacctgaaagaatacctcaggtgcctgaaaaagcccttggagacactttgcatcagtaactgtgacctctcacagtcagacttggattgcctgcccttttgcctgaatatttgtgaactcaaacatctgcatattagtgatatatatttatgtgatttactccttgagcctcttggttttctccttgagagagttggagataccctgaaaaccctggaattggtttcatgttgtatagtggactttcagttcagtgccttgctgcctgccctaagccaatgttctcacctcagagaggtcactttctatgataatgatgtttctctgcctttcttgaaacaacttctacaccacacagccctgctgagtcagctgatctatgagtgttaccctgcccctatagagtgctatgatgacagtggtgtaatactaacacacagattagaaagtttttgtcctgagctcctggatatactgagagccaaaagacagctccatagtgtctcctttcaaacaaccaaatgctctaaatgtggtgggtgctacatttatgatcggcatacccaatgttgccgttttgtggaactatgataagcttgattgtgaaactgagaaatagaaacttagtattggggactgatgaaatcctaagtgaatgtccactgctaaatggagcatgaaaatgtcaatcacctaaaagtctgagatacacgggaaagtcaataacttcctctgagctggtgaatggatgttgcatctgtagaaagaatcaagcacttgtagtttgaatgtgttacaatagaagcaccattttatgagactggcccaatctgttgactgcatacaataaatatgttgacttttttttttt

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