ver.2
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Previous release (v1)
2024-04-18 10:04:53, GGRNA : RefSeq release 222 (Jan, 2024)
Summary:
Results:
Matches are highlighted with green background.
Overlapping matches are dark colored.
cgtgtctgtgtgtgtatctttaaatgatcagtgtgataggctcctttaataaaaattaaaattcttaagtgtatatgtaatatgtggagaataaaagccaaagtcatacagaaatgcagtctaggtgacattcagagatgctgtgttgggctggtaccagaatgcattgatgtgtgtgctttaccgttgtgacttctcaatattctgcagcgtttcttaagagcatggttgtaatgttcgtaaagcagacctcatcataagaagaaaatgaatgacattttctctcctgtggaagtcccaatagccagagctcctgatattttagaaacagatggtttttaagtggccacatgtaattttatgcagttgactatatatcttaaacttaataagctcattttgtggttcattagtttaaggtatttgtttactaacatgtttttagagaaaatactgttacttggcattaattgtccatttacagtgttctgttaagttcctcatgctatgcaccttacataatttccctaaagaacagtcatctatcactgtggtgttaaaccgcaatctggatataacaaacaccatcactgcttgtgg...
position 3261
Synonym: 1700029A20Rik; 2010306G19Rik; 5730460G06Rik
XM_036163237.1 -
Mus musculus (house mouse) -
NCBI -
UCSC -
RefEx(expression)
cgtgtctgtgtgtgtatctttaaatgatcagtgtgataggctcctttaataaaaattaaaattcttaagtgtatatgtaatatgtggagaataaaagccaaagtcatacagaaatgcagtctaggtgacattcagagatgctgtgttgggctggtaccagaatgcattgatgtgtgtgctttaccgttgtgacttctcaatattctgcagcgtttcttaagagcatggttgtaatgttcgtaaagcagacctcatcataagaagaaaatgaatgacattttctctcctgtggaagtcccaatagccagagctcctgatattttagaaacagatggtttttaagtggccacatgtaattttatgcagttgactatatatcttaaacttaataagctcattttgtggttcattagtttaaggtatttgtttactaacatgtttttagagaaaatactgttacttggcattaattgtccatttacagtgttctgttaagttcctcatgctatgcaccttacataatttccctaaagaacagtcatctatcactgtggtgttaaaccgcaatctggatataacaaacaccatcactgcttgtgg...
position 1699
Synonym: 1700029A20Rik; 2010306G19Rik; 5730460G06Rik
NM_001356364.1 -
Mus musculus (house mouse) -
NCBI -
UCSC -
RefEx(expression)
cgtgtctgtgtgtgtatctttaaatgatcagtgtgataggctcctttaataaaaattaaaattcttaagtgtatatgtaatatgtggagaataaaagccaaagtcatacagaaatgcagtctaggtgacattcagagatgctgtgttgggctggtaccagaatgcattgatgtgtgtgctttaccgttgtgacttctcaatattctgcagcgtttcttaagagcatggttgtaatgttcgtaaagcagacctcatcataagaagaaaatgaatgacattttctctcctgtggaagtcccaatagccagagctcctgatattttagaaacagatggtttttaagtggccacatgtaattttatgcagttgactatatatcttaaacttaataagctcattttgtggttcattagtttaaggtatttgtttactaacatgtttttagagaaaatactgttacttggcattaattgtccatttacagtgttctgttaagttcctcatgctatgcaccttacataatttccctaaagaacagtcatctatcactgtggtgttaaaccgcaatctggatataacaaacaccatcactgcttgtgg...
position 1919
Synonym: 1700029A20Rik; 2010306G19Rik; 5730460G06Rik
NM_025926.5 -
Mus musculus (house mouse) -
NCBI -
UCSC -
RefEx(expression)
cgtgtctgtgtgtgtatctttaaatgatcagtgtgataggctcctttaataaaaattaaaattcttaagtgtatatgtaatatgtggagaataaaagccaaagtcatacagaaatgcagtctaggtgacattcagagatgctgtgttgggctggtaccagaatgcattgatgtgtgtgctttaccgttgtgacttctcaatattctgcagcgtttcttaagagcatggttgtaatgttcgtaaagcagacctcatcataagaagaaaatgaatgacattttctctcctgtggaagtcccaatagccagagctcctgatattttagaaacagatggtttttaagtggccacatgtaattttatgcagttgactatatatcttaaacttaataagctcattttgtggttcattagtttaaggtatttgtttactaacatgtttttagagaaaatactgttacttggcattaattgtccatttacagtgttctgttaagttcctcatgctatgcaccttacataatttccctaaagaacagtcatctatcactgtggtgttaaaccgcaatctggatataacaaacaccatcactgcttgtgg...
position 1941
Synonym: 1700029A20Rik; 2010306G19Rik; 5730460G06Rik
NM_027287.5 -
Mus musculus (house mouse) -
NCBI -
UCSC -
RefEx(expression)
cgtgtctgtgtgtgtatctttaaatgatcagtgtgataggctcctttaataaaaattaaaattcttaagtgtatatgtaatatgtggagaataaaagccaaagtcatacagaaatgcagtctaggtgacattcagagatgctgtgttgggctggtaccagaatgcattgatgtgtgtgctttaccgttgtgacttctcaatattctgcagcgtttcttaagagcatggttgtaatgttcgtaaagcagacctcatcataagaagaaaatgaatgacattttctctcctgtggaagtcccaatagccagagctcctgatattttagaaacagatggtttttaagtggccacatgtaattttatgcagttgactatatatcttaaacttaataagctcattttgtggttcattagtttaaggtatttgtttactaacatgtttttagagaaaatactgttacttggcattaattgtccatttacagtgttctgttaagttcctcatgctatgcaccttacataatttccctaaagaacagtcatctatcactgtggtgttaaaccgcaatctggatataacaaacaccatcactgcttgtgg...
position 1987
Synonym: 1700029A20Rik; 2010306G19Rik; 5730460G06Rik
NM_001356363.1 -
Mus musculus (house mouse) -
NCBI -
UCSC -
RefEx(expression)
Data Export:
Maximum 10000 results can be retrieved as Tab-delimited text or JSON format.
Debug Info:
Redirect URI : http://ggrna.dbcls.jp/mm/seq%3aGTGGAAGTCCCAATAGCCAGAGCTC
lang : en |
div : |
spe : mm |
query_string : seq:GTGGAAGTCCCAATAGCCAGAGCTC |
format : html |
download :
0.000 | 0.000 | search_start;
0.086 | 0.086 | count_done; http://172.18.8.71:7700/v1/refsub/query?q=(nt:GTGGAAGTCCCAATAGCCAGAGCTC)?source=Mus musculus (house mouse)?to=0&format=json
0.101 | 0.015 | search_done; http://172.18.8.71:7700/v1/refsub/query?q=(nt:GTGGAAGTCCCAATAGCCAGAGCTC)?source=Mus musculus (house mouse)?to=49?from=0?snippet=full_search?drilldown=source?get=accession,version,gi,length,symbol,synonym,geneid,division,source,definition&format=json
0.102 | 0.001 | cgi_end;
GGRNA ver.2 by
@meso_cacase at
DBCLS
This page is licensed under a
Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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