LOCUS       XM_072259800            1506 bp    mRNA    linear   VRT 18-MAR-2025
DEFINITION  PREDICTED: Mobula birostris pbx/knotted 1 homeobox 1.1 (pknox1.1),
            transcript variant X8, mRNA.
ACCESSION   XM_072259800
VERSION     XM_072259800.1
DBLINK      BioProject: PRJNA1225701
KEYWORDS    RefSeq.
SOURCE      Mobula birostris (giant manta)
  ORGANISM  Mobula birostris
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Chondrichthyes;
            Elasmobranchii; Batoidea; Myliobatiformes; Mobula.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092375) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_030028105.1-RS_2025_03
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 03/17/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1506
                     /organism="Mobula birostris"
                     /mol_type="mRNA"
                     /isolate="sMobBir1"
                     /db_xref="taxon:1983395"
                     /chromosome="6"
                     /sex="female"
                     /tissue_type="heart muscle"
                     /dev_stage="adult"
                     /geo_loc_name="USA: Marineland, Florida"
                     /lat_lon="29.6689 N 81.2134 W"
                     /collection_date="2010-05-07"
                     /collected_by="Georgia Aquarium"
     gene            1..1506
                     /gene="pknox1.1"
                     /note="pbx/knotted 1 homeobox 1.1; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 3
                     Proteins"
                     /db_xref="GeneID:140198781"
     CDS             392..1423
                     /gene="pknox1.1"
                     /codon_start=1
                     /product="homeobox protein PKNOX1.1 isoform X3"
                     /protein_id="XP_072115901.1"
                     /db_xref="GeneID:140198781"
                     /translation="

MMATQPIPLDSYQDEQSMPVVPQMTSNTEPGSSCTKSDPDASSPVPAESQTSMDADKGAIYRHPLFPLLALLFEKCEQSTQGSECITSASFDVDIENFVRKQEKEGKPFFSEDPEIDNLMVKAIQVLRIHLLELEKVNDLCKDFCNRYIACLKTKMNSENLLSSDPGGPYASVQTQQLPVQNTTISTLPGTISPQGIVVPATALQQGNVTVTTVNPTQVVSGGAVYQPVTVVTPQGQVVTQTHGTIRIQNAQLQLQLNQDVNVLHQDSENSPKSKRGVLPKQATNIMRSWLFQHIAHPYPTEDEKRQIASQTNLTLLQVNNWCNGLNIKSSERERGQSAVFIF"

     misc_feature    635..892
                     /gene="pknox1.1"
                     /note="N-terminal of Homeobox Meis and PKNOX1; Region:
                     Meis_PKNOX_N; pfam16493"
                     /db_xref="CDD:465140"
     misc_feature    1262..>1357
                     /gene="pknox1.1"
                     /note="Homeobox KN domain; Region: Homeobox_KN; pfam05920"
                     /db_xref="CDD:428673"
ORIGIN      

cggtgcggcgtgtgcgtgatgacgtcgggcgctgtgtggggctgattgctgcagtcgcttgtcagtctgatgaagattggcattcagatgctgggtcctgacgaagggttccggcccgaaacgtcgaccgatcttttccacggatgctgccgacctgctgagttactccagcatgttagccaagaatcgtgaataattaaaaaaaaaggtaacgaaggtgtgattccgaggctggtgtctctagatcatcctgggttgagctagaagaaacgtctcgccgtgggggatagccccaccttcctgtgagttgagggcctccgctgctttacctgtaaaaggtcactgacttcctcttcatgatgcaaatgtgggaacagcttttcttgaaaccatgatggcaacacagccgatccctcttgattcctatcaggacgaacagtcgatgccagttgtaccacagatgaccagcaacactgagcccggttccagctgcaccaaatcagatcctgatgcatcaagtcctgtacccgcagagtcacagacatctatggacgctgataagggagccatttacagacatcctctgttcccactcttggctcttctttttgaaaaatgtgagcagtcgacccaaggttctgaatgtatcacctcggcaagctttgatgtggacattgaaaactttgttcgcaaacaggaaaaggaagggaagccgtttttcagtgaagacccagagattgataatctgatggtcaaagcaatccaagtgctgcgtattcatctgttggagctagagaaggttaacgacttgtgcaaagatttctgtaaccgttacattgcttgtttgaagacgaaaatgaacagtgaaaacctactgagttctgaccctggtggaccttatgcttctgttcaaactcagcagcttcctgttcagaatacaactatcagcactctacctggcacaatcagtccccagggaattgtggttccagctacagcactccaacagggaaatgtcacagtgactacagtgaaccccacacaagttgtatcaggtggggcagtttatcagcctgttaccgtggttactcctcaaggtcaggtagtgacacaaacacatggtacaatccgaatccagaatgcacagcttcaactgcaactgaatcaagatgtgaatgtcttgcatcaagacagtgagaattctccaaaaagtaagcgtggagtattgccaaaacaagctacaaatatcatgaggtcctggttgttccagcacattgcgcatccttacccaacagaagatgagaagaggcaaatcgcaagccagactaacctcacactactccaggtcaacaattggtgcaatggtctcaatatcaagtccagtgaacgtgaacgtggacagtctgcagtctttatcttctgatggagcaactctggctgtacagcaggtgatgatggcccagcaaagcggagaggattctggtaacagtgttgaagaagatgaca

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