LOCUS       XM_068657539           14078 bp    mRNA    linear   VRT 22-SEP-2024
DEFINITION  PREDICTED: Anas acuta argonaute RISC catalytic component 3 (AGO3),
            mRNA.
ACCESSION   XM_068657539
VERSION     XM_068657539.1
DBLINK      BioProject: PRJNA1122813
KEYWORDS    RefSeq.
SOURCE      Anas acuta (northern pintail)
  ORGANISM  Anas acuta
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Galloanserae; Anseriformes;
            Anatidae; Anatinae; Anas.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_088999) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_963932015.1-RS_2024_09
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 09/19/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14078
                     /organism="Anas acuta"
                     /mol_type="mRNA"
                     /db_xref="taxon:28680"
                     /chromosome="21"
     gene            1..14078
                     /gene="AGO3"
                     /note="argonaute RISC catalytic component 3; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 45 Proteins"
                     /db_xref="GeneID:137842900"
     CDS             190..2772
                     /gene="AGO3"
                     /codon_start=1
                     /product="protein argonaute-3"
                     /protein_id="XP_068513640.1"
                     /db_xref="GeneID:137842900"
                     /translation="

MEIGSAGPVGAQPLLMVPRRPGYGTMGKPIKLLANCFQVEIPKIDVYLYEVDIKPDKCPRRVNREVVDSMVQHFKVTIFGDRRPVYDGKRSLYTANPLPVATTGVDLDVTLPGEGGKDRPFKVSIKFVSRVSWHLLHEVLTGRTLPEPLELDKPISTNPVHAVDVVLRHLPSMKYTPVGRSFFSAPEGYDHPLGGGREVWFGFHQSVRPAMWKMMLNIDVSATAFYKAQPVIQFMCEVLDIHNIDEQPRPLTDSHRVKFTKEIKGLKVEVTHCGTMRRKYRVCNVTRRPASHQTFPLQLENGQTVERTVAQYFREKYNLQLKYPHLPCLQVGQEQKHTYLPLEVCNIVAGQRCIKKLTDNQTSTMIKATARSAPDRQEEISRLVRSANYDADPFVQEFQFKVRDEMAHVTGRVLPAPMLQYGGRNRTVATPSHGVWDMRGKQFHTGVEIKMWAIACFATQRQCREEILKGFTDQLRKISKDAGMPIQGQPCFCKYAQGADSVEPMFRHLKNTYSGLQLIIVILPGKTPVYAEVKRVGDTLLGMATQCVQVKNVIKTSPQTLSNLCLKINVKLGGINNILVPHQRPSVFQQPVIFLGADVTHPPAGDGKKPSIAAVVGSMDAHPSRYCATVRVQRPRQEIIQDLASMVRELLIQFYKSTRFKPTRIIFYRDGVSEGQFRQVLYYELLAIREACISLEKDYQPGITYIVVQKRHHTRLFCADRTERVGRSGNIPAGTTVDTDITHPYEFDFYLCSHAGIQGTSRPSHYHVLWDDNCFTADELQLLTYQLCHTYVRCTRSVSIPAPAYYAHLVAFRARYHLVDKEHDSAEGSHVSGQSNGRDPQALAKAVQIHQDTLRTMYFA"

     misc_feature    406..690
                     /gene="AGO3"
                     /note="N-terminal domain of argonaute; Region: ArgoN;
                     pfam16486"
                     /db_xref="CDD:465134"
     misc_feature    718..870
                     /gene="AGO3"
                     /note="Argonaute linker 1 domain; Region: ArgoL1;
                     pfam08699"
                     /db_xref="CDD:462567"
     misc_feature    871..1233
                     /gene="AGO3"
                     /note="PAZ domain, argonaute_like subfamily. Argonaute is
                     part of the RNA-induced silencing complex (RISC), and is
                     an endonuclease that plays a key role in the RNA
                     interference pathway. The PAZ domain has been named after
                     the proteins Piwi,Argonaut, and Zwille; Region:
                     PAZ_argonaute_like; cd02846"
                     /db_xref="CDD:239212"
     misc_feature    order(1027..1029,1072..1074,1114..1116,1126..1128,
                     1180..1182,1201..1203,1207..1209)
                     /gene="AGO3"
                     /note="nucleic acid-binding interface [nucleotide
                     binding]; other site"
                     /db_xref="CDD:239212"
     misc_feature    1366..2643
                     /gene="AGO3"
                     /note="PIWI domain, Argonaute-like subfamily. Argonaute is
                     the central component of the RNA-induced silencing complex
                     (RISC) and related complexes. The PIWI domain is the
                     C-terminal portion of Argonaute and consists of two
                     subdomains, one of which provides the...; Region:
                     Piwi_ago-like; cd04657"
                     /db_xref="CDD:240015"
     misc_feature    order(1777..1779,1789..1791,1825..1836,1843..1845,
                     1867..1869,1876..1878,1888..1890,1900..1902)
                     /gene="AGO3"
                     /note="5' RNA guide strand anchoring site [active]"
                     /db_xref="CDD:240015"
     misc_feature    order(1981..1983,1987..1989,2197..2199,2611..2613)
                     /gene="AGO3"
                     /note="active site"
                     /db_xref="CDD:240015"
     polyA_site      14078
                     /gene="AGO3"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      

gcctccgccgagcgggtgggcctcggccgggaggggacggcacgggacgggaggccgggcctccaccgccgccaccaccgccgccgggtcaccgccgttaccgctgttaccgtcaccgtcgccgccgcccagcatcgccccggggcctccccagcccgcagcccccagcggctgcgcccagctccatgcatggaaatcggcagcgcaggacccgtcggggcacagcccctgctcatggtgcccagacgtcctggctatggcaccatgggcaaacccattaaactgctggccaactgcttccaagttgaaatcccaaagattgatgtctacctctatgaggtggacatcaaaccagataagtgtcctcggagggtgaacagggaggtggtggactcaatggtgcagcattttaaagtgacaatatttggggaccgtagaccagtttatgatgggaaaagaagcctttatacagccaatccgcttcctgtggccactactggggtggatttggatgtgacattaccaggagaaggtggaaaagatcgtcccttcaaagtgtcaataaagtttgtttctcgggtgagctggcacttgctgcatgaagttttgacaggaagaaccttgcctgagcctctggaactagacaaacctatcagcactaaccctgttcatgctgtcgatgtggtgctacgacacctaccctccatgaagtatacccctgtgggccgctcctttttctcagctccggaaggctacgatcaccccttgggtggcggcagggaggtctggtttggattccatcagtctgttcggcctgccatgtggaagatgatgctcaatattgatgtttctgccactgccttctacaaagcacaacctgtaattcagtttatgtgtgaagttcttgacattcataatattgatgaacaaccaagacctctgactgattctcatcgggtaaaattcaccaaagagataaagggtctaaaggtagaagtgactcattgtggaacgatgaggcggaaataccgtgtttgcaatgtaacaagaaggcctgcaagtcatcaaacctttcctttacagttagaaaatggacagactgtggagagaacagtagcacagtatttcagagagaaatacaaccttcagctgaaatatcctcatcttccctgcctacaagtgggacaggaacagaaacacacctacctgcctttagaagtatgtaatatcgtggctggccagcggtgtatcaagaagctaacagacaatcagacatcgactatgataaaggccacagcaagatctgctccagataggcaagaggaaataagcagattggtgagaagtgcaaattacgatgcagacccatttgtgcaagagttccagttcaaagtccgggatgagatggcccatgtgacagggcgtgtgctcccagctccaatgctgcagtatggaggacggaatcgaacagtggcaaccccaagccatggagtatgggacatgcgagggaagcagttccacactggtgttgagatcaaaatgtgggccatagcttgctttgcaacgcagagacagtgcagagaagaaatactgaagggttttacagatcagctgcgcaagatctccaaggatgccgggatgccgatccaaggccagccctgtttctgtaaatacgcccagggtgcagacagcgtggagcccatgtttcgacacctcaagaacacctattcagggcttcagctcatcattgtcatcctgccagggaaaacaccagtgtatgcggaggtgaagcgtgtgggagatacactactgggaatggccacacagtgtgttcaagtcaaaaatgtgattaaaacatctccgcagaccctttcaaacctgtgcctgaagattaatgttaaattaggaggaatcaacaacatccttgtacctcatcaacgaccttctgtgttccagcagccagtgatctttctgggagccgatgtcactcaccctcctgctggagatggaaagaagccttccatagctgctgttgtaggtagtatggatgctcatccaagccggtactgtgccacagtgcgtgttcagcgaccccggcaggaaatcatccaggacctggcctccatggttagagagcttctcatccagttctacaagtcaacacggttcaagcctacgcgtatcatcttctacagagatggggtctccgaaggacagtttcgacaggttttgtattatgaactgctagccattagggaagcctgcatcagtttggagaaggattaccagcctggaataacctatattgtggtgcagaaacgacatcatacacgattgttctgtgcagacagaactgaaagggttggacgaagtggcaatattccagctggaacaactgtagatacagacattacacatccatatgagtttgatttttacctctgcagccacgctggaatacagggtaccagccgtccctcacactatcatgttttgtgggatgataactgttttactgcagatgaacttcagctgctgacttaccagctctgccacacgtatgtgcgctgtacacgatcagtttctatacctgcaccagcgtattatgctcacctggtagcattcagagcacgataccatcttgtggacaaagaacatgacagtgctgaaggaagccatgtttcaggacaaagcaatggcagagatccgcaggccctcgcgaaggctgtacaaattcaccaagacaccttacgcacgatgtacttcgcttaagtcaataaaatgggagcatactcactgagaaggaagaactgaaaaattaagccacatacaatgtatgtttccagtggggttggtttatggggtgtgcctccgatcatgctgaagttgacactgtgcaggggcgagaggctaacccttaaattgacacaaggaagattgtttacttcatcgaggaacacagcactattatgcaatatgaaaccagccaactgcttttttggcgcggtctcctgtaggaagcaccgccatcattttttttttatttcttgtagtttaaccctcttatgcctttacctcaagttgctcggcagcacaactatctttgcaaaaaaaaaaaaaaaaaggatggtgtaattaaaaaaaaatagcaaacaacctttacaagaacaatcacaatgattgtttgggagaggaaagtgtgcaaaaaaaaatattattttttttaccccactgcattgaggaatctttctctcaatattgccatcagcgttcgaatgtgaacatatctgagtacatttgaatgtacagcactaactagaaaaaaaattgaagggagggaagatgttttgcacactaatccaataatttgaacatagtttagccaactgctgcctttgtctttcttcacagctttggagtcctcagctccaatagttcccttctaaaaagcaaacaaagctagtggtattatgtgcaggcagtagtgaaccaaactcttcttgctccctggtgaatttactaaagctgctgttttacctagtccaaaagtttcaattattttctatctggcaagtcaaatatcttgaagcttcacgtgagatcagatgtcccaagttttatgggattacatatagtaaacaccagaactgaaactttagagctaaggtctttttggaaaaagaaaaatgctagtttacttgctgcctctcacaccttaatgtgatttcatatgtatgtttttgaagtttagcttccttttgtttcttttatatttattagagtaataataatgctttaatttaattattacagaacatatggtcaacatcaacttttattttttagaaatgtaaccatgtttatttttaaaaaaaactgacaacttgtttttgctatcttttagtgcaataagcgttctaaaggaaatctgtgtccattgagctgtactaaagcagtgtttgtaccactaactgtgggataatggacacctccatgattttaaaaggacaaagtaaaagccttaattttgaaaggaaagttttatagtcagaaggaatcttgcattttccttttttaaatcaaaaaaaaaaaaaagcaaaaatgcttctagaactctgcaagctttacttgtcactgcagtattttgatttaacaaaggaattggccgtatttttggcttcgaaatgtggaggatatttgaagtaaatgaaaagggttttttattaagatctaagtttttacatgcttaattaaatctatttgacatcaataaaatgtctggaattattaaaagtttttaggcttttttcctctttgataatgactttccttttaaaattaagttattggtaacttcatttcactttgcaaataaagtaagagggctgggatagttctaacttcaaatcactgaaatgtgaaacaaactaatgggactctttcattccactttaaaggtaaaacaatatttaagatgtcagagatgagcatttattcagtgaggggactggggagttttgcactttgtaaactcgtgaactgcatttttgactgtttttatttgcactggttcatagtatatatattctgcagatcgtttatatgggcattgctgttatcccagcccttctgaactccacctgctctccacatgaaaaccagtgggttggtataagtagcttatctcctgtcatttatctcctgaaatccgttgtttgccaatatactgtattttgagcctaaaatctgagcccgttttgcttcaacaggcatgaatctcccccaccttttctgccagaaaacaaagtactgtattttgtgcatctgtatattgtatggaaatgtccgtagtgctgttcacaacactgtctcaaagagctttactaaacagtgtatatacgtattttatctcccagtatccaggaagataacgttttcagcctaactttgcagttacaattgcactggaaatagtcacgacggtgggcagttcgacggtg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