LOCUS       XM_064333692            2555 bp    mRNA    linear   VRT 05-APR-2024
DEFINITION  PREDICTED: Anguilla rostrata vimentin (vim), mRNA.
ACCESSION   XM_064333692
VERSION     XM_064333692.1
DBLINK      BioProject: PRJNA767379
KEYWORDS    RefSeq.
SOURCE      Anguilla rostrata (American eel)
  ORGANISM  Anguilla rostrata
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Anguilliformes;
            Anguillidae; Anguilla.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_057936) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_018555375.3-RS_2024_04
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 04/03/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2555
                     /organism="Anguilla rostrata"
                     /mol_type="mRNA"
                     /isolate="EN2019"
                     /db_xref="taxon:7938"
                     /chromosome="4"
                     /sex="female"
                     /tissue_type="liver"
                     /dev_stage="adult"
                     /geo_loc_name="Canada"
     gene            1..2555
                     /gene="vim"
                     /note="vimentin; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 105 Proteins"
                     /db_xref="GeneID:135253869"
     CDS             759..2114
                     /gene="vim"
                     /codon_start=1
                     /product="vimentin"
                     /protein_id="XP_064189762.1"
                     /db_xref="GeneID:135253869"
                     /translation="

MATRTQSSYKRLFGAEKPMMSRSSYSSRQYSVPVRSRVSYSVSSAPTIYSTKTSRVRSSAPITRLTSETLNFALSDAINTEFKANRTNEKAEMQHLNDRFASYIEKVRFLEQQNKILIAELEQLKGKGTTRIGDLYEEEMRELRRQVDQLTNEKARVEVDRDNMAEDIERLREKLQDEMLQREDAENNLQSFRQDVDNASLARVDLERKVESLQEEIVFLKKLHDEEIAELQAQLQDQHVQIDMDVAKPDLTAALRDVRLQYENLAAKNVQESEDWYKSKFADLSEAAARNNDALRQAKQEGSEYRRQVQALTCEVDALKGTNESMERQMREMEENFGLEASNYQDTITRLEDDIRNMKDEMAKHLREYQDLLNVKMALDIEIATYRKLLEGEESRISTPLPNFSSFNLRESMLESRPIMDSMSKKVVIKTIETRDGHVINESTQHHDDLE"

     polyA_site      2555
                     /gene="vim"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      

aatgaaaaagatcattagttaatgttttaagccttgctagtattttctgcccagaaattaatacttcaagagtgtgcaatgtaatctacaagccattatttagcaggttccatctgaattcagttaattgtatggcattaccatggagctacaaatactaacgtagaacttaaatgcatttgaatgcttcacttaatacttggtcaagattggcagcgcttaatagtcgtaaacagaaatgagtttgcagaaataaatcaatgaatacatattttaaacgcaaatatttattagactacaataggctacaaaacggatttcaccttacgttagtgaataggttagcatacgagggaaaagttgagcgctatagctttcagaacttcataagtttcctctggcttccagtctcactaaaaagaagttccactcgtttcgcctaaagggataacactcgcggagccgcgtgaacaaaggggcactgggctggaatctgaagtaccccgggcccccagatttcgcgaggagctgttttacgggctatgcgccgcgtcactcaagctgcctgtaccgttacctcatttgcataaggagtgtactataaattcaagcctctctctgcagctcgtcctcgttcggggcagttttgcgtgaagttttttggtgtgcttgcgtggaagtccagtcggaggaaaactcgttaaaccctactaaagaatattagtaagatatttttttaaagccaaaggattacaaaaatggccacgagaacgcaatcttcttacaagaggttgtttggcgcggagaaacccatgatgtctcggtccagctattcaagccgccagtactccgttccggtccgctcgcgtgtcagttatagtgtctcatccgcacccaccatctattcgaccaaaacttccagggtccgaagcagcgccccgattaccaggctcacctccgagactctgaatttcgccctgtccgatgccatcaacaccgaattcaaggctaaccgcaccaacgagaaggcagagatgcagcatctgaacgacaggttcgccagctacatcgagaaggtacgctttctggagcagcagaacaagattctgatcgcggagctcgagcagctgaaggggaagggcaccacgcgcatcggggacctgtacgaggaggagatgcgcgagctgaggcgccaggtggaccagctcaccaacgagaaagccagagtggaggtggatcgcgataacatggcggaggacatcgagcgactaagggagaaactccaagacgagatgcttcagcgggaggacgccgaaaataacctgcagagcttccgacaggatgtggacaacgcttccctggcccgtgtggacctggagcggaaggtggaatccctgcaggaggaaatcgtcttcctcaagaaactgcacgacgaggagatcgcagagctgcaggcgcagctgcaggatcagcacgtgcagatcgacatggacgtggccaaaccggacctgaccgcagccctgcgggacgtgcgcctgcagtacgagaacctggccgccaaaaacgtccaggagtccgaggactggtacaagtccaagttcgctgatctctcagaggccgccgcccggaacaacgatgccctccgtcaggccaagcaggagggcagcgagtaccgccgccaggtgcaggcgctcacctgcgaggtggacgctctcaagggaaccaacgagtccatggagcgccagatgagggagatggaggagaactttggcctggaggcctccaactaccaggacaccatcacccggctggaggacgacatccgcaacatgaaggacgagatggccaagcacctgcgggagtaccaggacctgctcaacgtcaagatggcgctggacatcgagatcgccacctacaggaagctgctggagggggaggaaagcaggatttctactccactgcccaatttttcctcctttaacctgagagagtccatgctggagtccagacccataatggacagcatgtccaagaaggtggtgatcaagaccatcgagaccagagatggccatgtgatcaacgagtccacccagcaccatgacgacctggaataaaccatcgcctgattgggcaccggaaacatgacagacctggcgctgacacggaggagaggttggagagagggagaggaagagagtgagagggagagacatacagacagagagagagagagagagagagagagagagagagatcataggaggaagggtgatggggagagggggggagtcattctgtttcatgtgacagaaatacatatgagaaatactacacaagtacaaaccaagaaacaaaagctttaaaagtgccttttttccataatatataggatcagctggtagtgtgttagggggagaatagagacaggctgtaggaatacagattgttcttctgaatgtcacggtttactgcacagtctttagtttacactcagacagtaacataatactttgagcaacacagtaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaa

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