LOCUS       XM_036144920            2495 bp    mRNA    linear   VRT 10-SEP-2020
DEFINITION  PREDICTED: Fundulus heteroclitus testis and ovary specific PAZ
            domain containing 1 (topaz1), mRNA.
ACCESSION   XM_036144920
VERSION     XM_036144920.1
DBLINK      BioProject: PRJNA615222
KEYWORDS    RefSeq.
SOURCE      Fundulus heteroclitus (mummichog)
  ORGANISM  Fundulus heteroclitus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes;
            Fundulidae; Fundulus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_046373.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Fundulus heteroclitus Annotation
                                           Release 102
            Annotation Version          :: 102
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.5
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2495
                     /organism="Fundulus heteroclitus"
                     /mol_type="mRNA"
                     /isolate="FHET01"
                     /db_xref="taxon:8078"
                     /chromosome="13"
                     /sex="male"
                     /tissue_type="pool"
                     /dev_stage="adult"
     gene            1..2495
                     /gene="topaz1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 100% coverage of the annotated
                     genomic feature by RNAseq alignments, including 5 samples
                     with support for all annotated introns"
                     /db_xref="GeneID:105931937"
     CDS             343..2055
                     /gene="topaz1"
                     /codon_start=1
                     /product="protein TOPAZ1"
                     /protein_id="XP_036000813.1"
                     /db_xref="GeneID:105931937"
                     /translation="

MCRFQHLPVEGDEKFCVDAVAKFSKHPACLLKAGAVFTGYYQNSPPGAYFSMPVLLTLLWALLKAGMVSHVFSVLHVSLAHKLVPDHEFLLALFNYVRDKGLQSLIPELMELTFKMAGVGLELDLDWMENVKNTPMFQQTAQQTSHDALVGNHNPELLNLLHGIVEIELCVKQEDWKRMGEVYKALCQFSQHPNQVERISGRVAVALLSESKDKVSLPFAAFAETACQGESGENLVKSFLGRIGVTLMLRYHKNQHWTKGCRVVEVMSVLKVDYTVLKSLFGNEHGVSRCYIISVAAELFFLSGSVEGALKTLREHNWFLSSSSWPCEPADLERRTNVLRRLAGKTSYRDTLEVLCNLPGVKEPNDLIDISRYSPLFASHLQVCVERQVLPVASDTLDFMLCKKLAVEHPLLQAVLDKLGKQNLWLRARELFKHSLNVGYYPGVSAAPGSMALIVPCQLGEVELAITLEMFVALNASAILPLSDTATGPPLSITLRRTLSCEVEYISAGNRLLSAACLPQPKLTVHYIEVNSSQEQVFRLHVPTAHRWLRHNHSWASEMWTQQAKCLNPN"

     misc_feature    841..1365
                     /gene="topaz1"
                     /note="Putative aspartate racemase; Region:
                     Asp_Glu_race_2; pfam14669"
                     /db_xref="CDD:464250"
ORIGIN      

cagccagtggcagcggctcttgaagacgacgaggagagcgaaagcaggccgtggagacctcggtgtggcggcgtctctaccagaggtccaaacccgtgtcccgtcgccgtcagccagagcagacacgtgggcccctccggcgaaaacagtaggatagatggcaaatgtaatcttggtcaacccatcaagaaagtgagcttctcccacagcgtccccccagtcacggccttacaaacgggacccgctgtgaaaaccccagcgactaggacagatcctaggtgccagaaatctaatgtttactgcagactgtacttcagtgaatcgctgtcctgtggctacaaaatgtgtcgcttccagcatctaccagtggagggggatgagaagttctgtgttgacgctgtggcaaagttctccaaacatccagcttgcctcctgaaagcaggagctgtgtttacagggtactaccagaacagcccaccgggggcgtacttctccatgccggtgctcctgaccctcctttgggctctgcttaaagctggcatggtgtcccatgtcttctcagtccttcacgtcagcttggcccataaattagtgcctgaccacgagttcctgctggctctttttaactatgtgagagacaaggggctccagagcttgataccagaactgatggagctcaccttcaagatggccggcgttggtttggagctggacttggactggatggaaaatgtgaaaaacactcccatgtttcagcagacggctcagcagacgtcacacgatgctttggttggcaaccacaatcctgagctgctgaatttattgcatgggattgttgaaatagagctttgtgtcaagcaagaagactggaaacggatgggagaggtgtataaggccctctgccagttcagccagcaccctaaccaagtggagcgcatcagcggccgcgtcgccgtagcccttctgtctgagagcaaagacaaggtgtcactgccctttgctgcttttgctgagacagcgtgtcagggtgaaagtggggagaaccttgttaagagttttttgggcagaatcggagtcactttgatgttaagataccacaaaaaccagcattggactaagggctgcagagtggtggaggtgatgtctgttttaaaagtggactacaccgtactgaagagtttatttggaaatgaacatggagtatcacgctgctacattatcagtgtggcagcagagctcttcttcctgagtggaagtgtggaaggagctctgaagacacttcgagaacacaactggttcctgagttcgagttcgtggccatgtgagcctgctgatctggagaggaggactaatgtgttgaggcgtctggctggtaaaacctcctaccgggacacgctggaggtgctctgcaatctgccaggagttaaggaacccaacgacttgatagacatctccaggtacagtcctctgtttgcgtctcacctccaagtgtgcgtggagaggcaggttctacctgtggcgtcggacacgctggacttcatgctgtgtaaaaagctggctgttgagcacccactgctccaggcggtgctcgacaaactggggaaacagaacctgtggctgcgggcgcgggaactcttcaaacattcgttgaatgtgggctactaccctggagtgtctgcagcccccggttcgatggcgctgattgtaccatgtcagcttggagaggtggagcttgccatcaccttggagatgttcgttgccttaaatgcgtcggccattcttcctctttcagacaccgccaccggtcctcctctcagcatcactctaagaaggactctcagctgtgaggtggagtacatctcagcaggtaaccgccttctttccgcagcttgccttcctcagcccaaactcactgtccactacatcgaggtcaactcctcccaggagcaggtgtttaggctccacgttcccaccgcacaccgctggctccgccacaaccactcatgggccagcgagatgtggacacagcaagctaaatgtttaaaccctaactgatcttggcaagtatttgacattgtttatgttcagcatcagtgagttctccaggaaaggtcaatgaatcaggtagaaccacgtgtttcatctcaagttctatgggggcgggggggctaacggcagaaaattgcaaccttttttggctttcactcagttttaagggactatttgaatttatttattttgggaaacagtttatttttttgggggttggggggtgtaaggctgtttacctgtatataaaatttgaatgtaaatatgtatttatatgaccacattatgtttctgtattgtttgttacaatataaagtgttgcttgttcagagcttgcaatttaccatttctttgtatgaaatgttttattaaaagcttgcttctctgtgtgcgtgtacatatttatagacaacattctttacatgcaatattgaggaaaagtggat

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