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Previous release (v1)
2026-10-27 05:55:24, GGRNA.v2 : RefSeq release 233 (Jan, 2026)
LOCUS NM_001142229 3071 bp mRNA linear VRT 22-DEC-2019
DEFINITION Xenopus tropicalis epithelial membrane protein 1 (emp1), mRNA.
ACCESSION NM_001142229
VERSION NM_001142229.1
KEYWORDS RefSeq.
SOURCE Xenopus tropicalis (tropical clawed frog)
ORGANISM Xenopus tropicalis
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae;
Xenopus; Silurana.
REFERENCE 1 (bases 1 to 3071)
AUTHORS Klein SL, Strausberg RL, Wagner L, Pontius J, Clifton SW and
Richardson P.
TITLE Genetic and genomic tools for Xenopus research: The NIH Xenopus
initiative
JOURNAL Dev. Dyn. 225 (4), 384-391 (2002)
PUBMED 12454917
COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final
NCBI review. The reference sequence was derived from BC168814.1.
##Evidence-Data-START##
Transcript exon combination :: BC168814.1, DT432879.1 [ECO:0000332]
RNAseq introns :: single sample supports all introns
SAMN05930348 [ECO:0000348]
##Evidence-Data-END##
FEATURES Location/Qualifiers
source 1..3071
/organism="Xenopus tropicalis"
/mol_type="mRNA"
/db_xref="taxon:8364"
/chromosome="4"
/map="4"
gene 1..3071
/gene="emp1"
/note="epithelial membrane protein 1"
/db_xref="GeneID:100216276"
/db_xref="Xenbase:XB-GENE-970892"
misc_feature 28..30
/gene="emp1"
/note="upstream in-frame stop codon"
CDS 55..546
/gene="emp1"
/codon_start=1
/product="epithelial membrane protein 1"
/protein_id="NP_001135701.1"
/db_xref="GeneID:100216276"
/db_xref="Xenbase:XB-GENE-970892"
/translation="
MLVLLAGIFVVHIATVIMLFVATISNVWLQALPGGTATSGSLGIWLACSGTCSSIFGSIPEENHPSMRAIEAFMILAIIFSCFALCSFIGQLFMLEKGCRFYITGALMLVCWLCIMIAVSIYTARFANANLSQYYHGYCFILTWICFVFSFIIGILYLVLRKK"
misc_feature 55..525
/gene="emp1"
/note="PMP-22/EMP/MP20/Claudin family; Region:
PMP22_Claudin; cl21598"
/db_xref="CDD:473919"
ORIGIN
cagcagagcagtatttctgtaaggatctaacgtgccatccttaagaaaacaaacatgttggtccttctggctggaatctttgtggtccatattgcaacagtgattatgctctttgttgccaccatttccaatgtttggttgcaagctcttccaggagggactgctacttctggatccctgggtatctggttggcttgttctgggacatgttcaagtatatttggttctattccagaagaaaatcatccttccatgagagcaattgaagccttcatgatcctggccattatcttttcctgctttgccctgtgttccttcattgggcagttgtttatgctggaaaaaggatgtcgtttctacatcactggggctctaatgcttgtttgctggttgtgcataatgatcgctgtttccatctacacggccagatttgcaaatgctaatttaagccaatattaccatggatactgctttatactgacctggatctgcttcgtctttagtttcataattggaatactctacctggtgctccggaagaaataaacgtccagtcccatatggcacatgaactagcagcaaccccaagtgacaaactgcaggcacgcaggcacactacagggaaaccactccttttatttttttgaataatgtggctaagaataattatacgccctatgtagttcaaaaaggcatctcgaagtccattagctagttatacatattatatcaactgtcacaagacaattagaatgttggtactgcagtggcctcataccaagggggttaattcgcattttagtgggttcgcttctaaacataaagaaaatcagaatttaattttgaaataagcaaagtatttttgttattttaatttattgaaacagtagcctaaccgttatttctgataggatagttcagattgcagtatgactgggcaatgtcactgcatcactgctaaacaaaaccgctcattctcttggcagtagtgggtcccacgcttaaaggggttacggattcctaatataaccaatggtagaacggttagttgctcagccaggcctacttgtattaactatagaaatatctgagttcaatgaagttaccttaaaattaatattgcgctcctcagggtttttgcagagttaagaatatcctgttgtttttatgaaaatgtatttggaaatattgtcacttcaatgctttgtatagaggtaccagaaagagtaaaggtcctctgtatatctgttagcaatcagaagtattggtaaaatgtagactataggcataggatatgaaattatcatcataaggatgagcagtgatgttattgcccgcgagcaaagccccttatattaacctggtgcagaaaaacgaagacaaaataaatgatatttctgtttaattctgttactaagccactctgagcaaaatgcctttcagtaatttccacagtggatcaaataatagttttacgtttttgtttgtaactaggtgttggaatagtattatgttggagtgatcacaagagcaggagataatgtgaaggactaactggagttcatgcatgtattaaaaatagacataaaatgtgtatttcagattctgcactatggcactgggaggcccagaaatctggaagggggcagctacatatcccagtatttaacttctcttaagacaaatcttttgcaaacccaaacccaaaattacactgtcaggcatcagatgaataatttgtccagcccccttcaacttaacatttagatcatagcaggagccatgagtgagccaagagaacatgcagtgccctaacaacacaagcacaatgctagtgcagtgacaatattgtgttacatggattaccattagttacaatgagatgcactggaataatatggccgggtataatgtcctggtaacaggctccctgaaggaccaagtcctttaacattcttatggccttgtgtcattatggccatggcaaaatgttttccatgtcccttacgtagctgtctcaacctgccctacccattgttttactctatgcatccctgcctgtccatggttgtcactgcattcaggagccatgcctagttgtcccagtctgcttagatcatgctttggctttgctgctggccatatcagtctctgggtgtccctgtaagcttgatccatgacttgtattacctgtctccctacaagggcctagttgcctcttcagcttgatccatgccttgcttccccttcctgccataccagtgcctagctgtccctgtgtgccttactgtggtcttttgcccactctttcaacaaatacttgtctctccatacctaacccatgtcttatacttactttccgtaccaatatctacttgttgctgtatgtcgaacccatgttttagtttccttgtgtgatttaccaagtaaaccctccgtaccaaacccatttaatttttacccccaacaaaatgtacgtattcataaaagccccaccagaagttagtttttcctgctagcccaggctgttctgactcctgtcctgttgtccctttccaccttaatgtcctttctaatgattagggccagccttagtttaaaaaattacactgggcaacaattagtgaaccaacacaacattcatgatgtttattcccttttagttaatatttacaggatttaataaaataatttacagtttgcacaaagcatattgtatcttacaagagtatatacaaaaagaaaatggtcagactggcactgccttctacgtggtaccctgtttagtcacacagagatcctttttgtagcctagccttgtaaattctgtttctgtattgctctccaagtctcaagtctttttatgtatatgggtaaaatagctttttttctttactattacattcctactaacgggcattgtatatacaattaaagatcatggggctactgctttttgtggaatagaaattaacatatattttatgcactaattgtaaatattttgatacaatattatatgtctccaagaactgaaatacaattcttgctcatccaaaaaaaaaaaaaaa
//
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@meso_cacase at
DBCLS
This page is licensed under a
Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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