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2026-01-17 12:31:42, GGRNA : RefSeq release 232 (Sep, 2025)

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Rattus norvegicus zinc finger protein 120 like 2 (Zfp120l2), mRNA. (2483 bp)
gagaaaccttacaaatgtaatgaatgtggtaaggcctttgtaggtcagaatgatcttaaaaaacataaaagaatacatactggagagaaaccttacaaatgtaatgaatgtggtaaagcctttgtatggattggtaatctccgaacacataaagtactacatactggagagaaaccttacaaatgtaatgaatgtggtaaagcctttgcatgtagcactagtctccgaacacataaagcaatacatactggagtgaaacctttcgaatgtaagcaatgtggtaaagcctttgtaggtcagaatgaccttaaaaggcatgaaagaattcatactggagagaaaccttaccaatgtaatgaatgtggtaaagcctttgtatttgatgctagtctccgaaaacatagagcaatacatactggagtgaaaccttatgaatgtaagcaatgtggtaaagcctttgtaggtcagaatgaccttaaaaggcatgaaagaattcatactggagagaaaccttacgaatgtaatgaatgtggtaaagccttttcacaatcaagccaactccaactacataaaaaaacacatacatactaaagagtaacc...
position 1825
NM_001395021.1 - Rattus norvegicus (Norway rat) - NCBI - UCSC - RefEx(expression)
Rattus norvegicus zinc finger protein 431-like (LOC120094815), transcript variant 3, mRNA. (2950 bp)
gagaaaccttacaaatgtaatgaatgtggtaaggcctttgtattcaattttaatctccgagcacataaagtaatacatactggagagaaaccttacaaatgtagtgaatgtggtaaagcctttgcatgtaacactagtctccgaacacataaagcaatacatactggagtgaaacctttcgaatgtaagcaatgtggtaaagcctttgcatgtaacactagtctccaaacacatagagcaatacatactggagtgaaacctttcgaatgtaagcaatgtggtaaagcctttgtaggtcagaatgaccttaaaaggcatgaaagaattcatactggagagaaaccttacgaatgtaatgaatgtggtaaagccttttcacaatcaagccaactccaactacataaaagaacacatacatactaaagagtaaccctgtgaatgtaaccaatgcagtaaagcctttactgtgatattcaaaggtatggtggttaaaatatacttggcccatggcaagtggcattgttatgaggtatggcccttttggagtagatgtggcctttgaggatgtgtgtcactgtgggggagggggtggtggtggtt...
position 2460
NM_001409278.1 - Rattus norvegicus (Norway rat) - NCBI - UCSC - RefEx(expression)
Rattus norvegicus zinc finger protein 431-like (LOC120094815), transcript variant 1, mRNA. (2857 bp)
gagaaaccttacaaatgtaatgaatgtggtaaggcctttgtattcaattttaatctccgagcacataaagtaatacatactggagagaaaccttacaaatgtagtgaatgtggtaaagcctttgcatgtaacactagtctccgaacacataaagcaatacatactggagtgaaacctttcgaatgtaagcaatgtggtaaagcctttgcatgtaacactagtctccaaacacatagagcaatacatactggagtgaaacctttcgaatgtaagcaatgtggtaaagcctttgtaggtcagaatgaccttaaaaggcatgaaagaattcatactggagagaaaccttacgaatgtaatgaatgtggtaaagccttttcacaatcaagccaactccaactacataaaagaacacatacatactaaagagtaaccctgtgaatgtaaccaatgcagtaaagcctttactgtgatattcaaaggtatggtggttaaaatatacttggcccatggcaagtggcattgttatgaggtatggcccttttggagtagatgtggcctttgaggatgtgtgtcactgtgggggagggggtggtggtggtt...
position 2367
NM_001409276.1 - Rattus norvegicus (Norway rat) - NCBI - UCSC - RefEx(expression)
Rattus norvegicus zinc finger protein 431-like (LOC120094815), transcript variant 2, mRNA. (2925 bp)
gagaaaccttacaaatgtaatgaatgtggtaaggcctttgtattcaattttaatctccgagcacataaagtaatacatactggagagaaaccttacaaatgtagtgaatgtggtaaagcctttgcatgtaacactagtctccgaacacataaagcaatacatactggagtgaaacctttcgaatgtaagcaatgtggtaaagcctttgcatgtaacactagtctccaaacacatagagcaatacatactggagtgaaacctttcgaatgtaagcaatgtggtaaagcctttgtaggtcagaatgaccttaaaaggcatgaaagaattcatactggagagaaaccttacgaatgtaatgaatgtggtaaagccttttcacaatcaagccaactccaactacataaaagaacacatacatactaaagagtaaccctgtgaatgtaaccaatgcagtaaagcctttactgtgatattcaaaggtatggtggttaaaatatacttggcccatggcaagtggcattgttatgaggtatggcccttttggagtagatgtggcctttgaggatgtgtgtcactgtgggggagggggtggtggtggtt...
position 2435
NM_001409277.1 - Rattus norvegicus (Norway rat) - NCBI - UCSC - RefEx(expression)
Rattus norvegicus NudC domain containing 3 (Nudcd3), transcript variant 2, mRNA. (3589 bp)
cgggcagctgcgaggagtaaagccatcctcactgggcacagtgcttccctgaatagaaatgaggttccgttactaaggaaggaaagggatataaatgctggtgagtcatcggcacagatcgggggatgctgaggtaagtttattcacactgagggtgaagtttttctgtgaggacattttgggagcactgttcagtcagtgacagtctggggtccctctgggaaattattatgttctgggaccaggcagataaaagaggacctggaaaatgaaagtgtatccaggaaatgatgaggtcacagtgaccttgtagagggcacctaattctgacccaatgaatggttcagagtgactttctaaaccactgagaaaagaggccaggaggcaggtgctcactttagcagtgcttatgccctgtcagtaagtagaaactggctgcaaggtcaggtgtcccaacctgtcgggaggtgggacctcataggaacctaagatcttgacatttggtatgttggtgacaatgtgggaagccctgggatgagagggaacatccttgcaggacgcctgcaggtggaccacagacacacctgggtacctcaggag...
position 1194
NM_001103362.2 - Rattus norvegicus (Norway rat) - NCBI - UCSC - RefEx(expression)
Rattus norvegicus G2 protein (G2), transcript variant 2, mRNA. (10385 bp)
aatgtttagttgattcggacaagtaaaatacagcattataaatcagattccctttaaactagacaccgtgtgttcaagaagcctatgcaaagaaaaccttaaattaatgaaaaaattcatagtcatattttcccaccatgattaaagcctcctgggactgagatgttgttccttccctaaagagtctcctaatcttagcatagaagactctgagaagttcagatggttaaaatcatgagatataaaagtgagctgaagttccacaggcacccagaggaggctgcagtgagctcaggtcatcatgaccttcgacagtccccgaagccatagaggatctcagtggtttggaaggaggaagccaaactccagacaagtggagggttgagccccagcctgctgattcatgccccagcctgctctccatttcaccaagctgcctgttcacttggggacacatttctctaactgtgcccaggggaaaaaaaaaaaaaggcagggtttatgtgagagattccatattgctcttgccaaaagaaaagtaaaagaaagaaagaaaaaaaaaaccaatttggctgtttccagagagttccactggagact...
position 7232
Synonym: D430041D05Rikl; RGD1310754
NM_001437728.1 - Rattus norvegicus (Norway rat) - NCBI - UCSC - RefEx(expression)
Rattus norvegicus G2 protein (G2), transcript variant 1, mRNA. (12584 bp)
aatgtttagttgattcggacaagtaaaatacagcattataaatcagattccctttaaactagacaccgtgtgttcaagaagcctatgcaaagaaaaccttaaattaatgaaaaaattcatagtcatattttcccaccatgattaaagcctcctgggactgagatgttgttccttccctaaagagtctcctaatcttagcatagaagactctgagaagttcagatggttaaaatcatgagatataaaagtgagctgaagttccacaggcacccagaggaggctgcagtgagctcaggtcatcatgaccttcgacagtccccgaagccatagaggatctcagtggtttggaaggaggaagccaaactccagacaagtggagggttgagccccagcctgctgattcatgccccagcctgctctccatttcaccaagctgcctgttcacttggggacacatttctctaactgtgcccaggggaaaaaaaaaaaaaggcagggtttatgtgagagattccatattgctcttgccaaaagaaaagtaaaagaaagaaagaaaaaaaaaaccaatttggctgtttccagagagttccactggagact...
position 9431
Synonym: D430041D05Rikl; RGD1310754
NM_001419547.1 - Rattus norvegicus (Norway rat) - NCBI - UCSC - RefEx(expression)

Data Export:

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Debug Info:

Redirect URI : https://ggrna.dbcls.jp/ja/rn/iub%3aaggtcannrtgacct
lang : ja | div : | spe : rn | query_string : iub:aggtcannrtgacct | format : html | download : 

0.000 | 0.000 | search_start;
0.131 | 0.131 | count_done; http://172.18.8.71:7700/v1/refsub/query?q=((nt:aggtcaaaatgacct)%7C(nt:aggtcaatatgacct)%7C(nt:aggtcaagatgacct)%7C(nt:aggtcaacatgacct)%7C(nt:aggtcataatgacct)%7C(nt:aggtcattatgacct)%7C(nt:aggtcatgatgacct)%7C(nt:aggtcatcatgacct)%7C(nt:aggtcagaatgacct)%7C(nt:aggtcagtatgacct)%7C(nt:aggtcaggatgacct)%7C(nt:aggtcagcatgacct)%7C(nt:aggtcacaatgacct)%7C(nt:aggtcactatgacct)%7C(nt:aggtcacgatgacct)%7C(nt:aggtcaccatgacct)%7C(nt:aggtcaaagtgacct)%7C(nt:aggtcaatgtgacct)%7C(nt:aggtcaaggtgacct)%7C(nt:aggtcaacgtgacct)%7C(nt:aggtcatagtgacct)%7C(nt:aggtcattgtgacct)%7C(nt:aggtcatggtgacct)%7C(nt:aggtcatcgtgacct)%7C(nt:aggtcagagtgacct)%7C(nt:aggtcagtgtgacct)%7C(nt:aggtcagggtgacct)%7C(nt:aggtcagcgtgacct)%7C(nt:aggtcacagtgacct)%7C(nt:aggtcactgtgacct)%7C(nt:aggtcacggtgacct)%7C(nt:aggtcaccgtgacct))?source=Rattus norvegicus (Norway rat)?to=0&format=json
0.233 | 0.102 | search_done; http://172.18.8.71:7700/v1/refsub/query?q=((nt:aggtcaaaatgacct)%7C(nt:aggtcaatatgacct)%7C(nt:aggtcaagatgacct)%7C(nt:aggtcaacatgacct)%7C(nt:aggtcataatgacct)%7C(nt:aggtcattatgacct)%7C(nt:aggtcatgatgacct)%7C(nt:aggtcatcatgacct)%7C(nt:aggtcagaatgacct)%7C(nt:aggtcagtatgacct)%7C(nt:aggtcaggatgacct)%7C(nt:aggtcagcatgacct)%7C(nt:aggtcacaatgacct)%7C(nt:aggtcactatgacct)%7C(nt:aggtcacgatgacct)%7C(nt:aggtcaccatgacct)%7C(nt:aggtcaaagtgacct)%7C(nt:aggtcaatgtgacct)%7C(nt:aggtcaaggtgacct)%7C(nt:aggtcaacgtgacct)%7C(nt:aggtcatagtgacct)%7C(nt:aggtcattgtgacct)%7C(nt:aggtcatggtgacct)%7C(nt:aggtcatcgtgacct)%7C(nt:aggtcagagtgacct)%7C(nt:aggtcagtgtgacct)%7C(nt:aggtcagggtgacct)%7C(nt:aggtcagcgtgacct)%7C(nt:aggtcacagtgacct)%7C(nt:aggtcactgtgacct)%7C(nt:aggtcacggtgacct)%7C(nt:aggtcaccgtgacct))?source=Rattus norvegicus (Norway rat)?to=49?from=0?snippet=full_search?drilldown=source?get=accession,version,gi,length,symbol,synonym,geneid,division,source,definition&format=json
0.240 | 0.007 | cgi_end;

GGRNA ver.2 by @meso_cacase at DBCLS
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If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596. [Full Text]