2024-11-01 10:22:43, GGRNA.v2 : RefSeq release 226 (Sep, 2024)
LOCUS NR_197270 1286 bp RNA linear ROD 25-JUL-2024 DEFINITION Rattus norvegicus glyceraldehyde-3-phosphate dehydrogenase, pseudogene 119 (Gapdh-ps119), non-coding RNA. ACCESSION NR_197270 VERSION NR_197270.1 KEYWORDS RefSeq. SOURCE Rattus norvegicus (Norway rat) ORGANISM Rattus norvegicus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus. REFERENCE 1 (bases 1 to 1286) AUTHORS Kornberg,M.D., Sen,N., Hara,M.R., Juluri,K.R., Nguyen,J.V., Snowman,A.M., Law,L., Hester,L.D. and Snyder,S.H. TITLE GAPDH mediates nitrosylation of nuclear proteins JOURNAL Nat Cell Biol 12 (11), 1094-1100 (2010) PUBMED 20972425 REFERENCE 2 (bases 1 to 1286) AUTHORS Baba,T., Kobayashi,H., Kawasaki,H., Mineki,R., Naito,H. and Ohmori,D. TITLE Glyceraldehyde-3-phosphate dehydrogenase interacts with phosphorylated Akt resulting from increased blood glucose in rat cardiac muscle JOURNAL FEBS Lett 584 (13), 2796-2800 (2010) PUBMED 20488185 REFERENCE 3 (bases 1 to 1286) AUTHORS Sen,N., Hara,M.R., Ahmad,A.S., Cascio,M.B., Kamiya,A., Ehmsen,J.T., Agrawal,N., Hester,L., Dore,S., Snyder,S.H. and Sawa,A. TITLE GOSPEL: a neuroprotective protein that binds to GAPDH upon S-nitrosylation JOURNAL Neuron 63 (1), 81-91 (2009) PUBMED 19607794 REMARK Erratum:[Neuron. 2009 Sep 10;63(5):709. Aggrawal, Nishant [corrected to Agrawal, Nishant]] REFERENCE 4 (bases 1 to 1286) AUTHORS Foster,L.J., Rudich,A., Talior,I., Patel,N., Huang,X., Furtado,L.M., Bilan,P.J., Mann,M. and Klip,A. TITLE Insulin-dependent interactions of proteins with GLUT4 revealed through stable isotope labeling by amino acids in cell culture (SILAC) JOURNAL J Proteome Res 5 (1), 64-75 (2006) PUBMED 16396496 REFERENCE 5 (bases 1 to 1286) AUTHORS Hara,M.R., Agrawal,N., Kim,S.F., Cascio,M.B., Fujimuro,M., Ozeki,Y., Takahashi,M., Cheah,J.H., Tankou,S.K., Hester,L.D., Ferris,C.D., Hayward,S.D., Snyder,S.H. and Sawa,A. TITLE S-nitrosylated GAPDH initiates apoptotic cell death by nuclear translocation following Siah1 binding JOURNAL Nat Cell Biol 7 (7), 665-674 (2005) PUBMED 15951807 REFERENCE 6 (bases 1 to 1286) AUTHORS Ishida,A., Tada,Y., Nimura,T., Sueyoshi,N., Katoh,T., Takeuchi,M., Fujisawa,H., Taniguchi,T. and Kameshita,I. TITLE Identification of major Ca(2+)/calmodulin-dependent protein kinase phosphatase-binding proteins in brain: biochemical analysis of the interaction JOURNAL Arch Biochem Biophys 435 (1), 134-146 (2005) PUBMED 15680915 REFERENCE 7 (bases 1 to 1286) AUTHORS Andrade,J., Pearce,S.T., Zhao,H. and Barroso,M. TITLE Interactions among p22, glyceraldehyde-3-phosphate dehydrogenase and microtubules JOURNAL Biochem J 384 (Pt 2), 327-336 (2004) PUBMED 15312048 REFERENCE 8 (bases 1 to 1286) AUTHORS Wu,K., Aoki,C., Elste,A., Rogalski-Wilk,A.A. and Siekevitz,P. TITLE The synthesis of ATP by glycolytic enzymes in the postsynaptic density and the effect of endogenously generated nitric oxide JOURNAL Proc Natl Acad Sci U S A 94 (24), 13273-13278 (1997) PUBMED 9371836 REMARK Erratum:[Proc Natl Acad Sci U S A 1998 Mar 3;95(5):2714] COMMENT VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JAXUCZ010000005.1. ##Evidence-Data-START## Transcript is intronless :: SRR26360176.1134614.1, SRR23984936.903615.1 [ECO:0000345] ##Evidence-Data-END## PRIMARY REFSEQ_SPAN PRIMARY_IDENTIFIER PRIMARY_SPAN COMP 1-1286 JAXUCZ010000005.1 116787571-116788856 FEATURES Location/Qualifiers source 1..1286 /organism="Rattus norvegicus" /mol_type="transcribed RNA" /strain="BN" /db_xref="taxon:10116" /chromosome="5" /map="5" gene 1..1286 /gene="Gapdh-ps119" /note="glyceraldehyde-3-phosphate dehydrogenase, pseudogene 119" /pseudo /db_xref="GeneID:134486952" /db_xref="RGD:401988152" misc_RNA 1..1286 /gene="Gapdh-ps119" /product="glyceraldehyde-3-phosphate dehydrogenase, pseudogene 119" /pseudo /db_xref="GeneID:134486952" /db_xref="RGD:401988152" exon 1..1286 /gene="Gapdh-ps119" /inference="alignment:Splign:2.1.0" /pseudo ORIGIN
ctctgctcctccctgttctagagacagccgcatcttcttgtgcagtgccagcctcgtctcatagacaagatggtgaaggtcggtgtgaacggatttggccgtatcggacgcctggttaccagggctgccttctcttgtgacaaagtggacattgttgccatcaacgaccccttcattgacctcaactacatggtctacatgttccagtatgactctacccacggcaagttcaacggcacagtcaaggctgagaatgggaagctggtcatcaacgggaaacccatcaccatcttccaggagcgagatcccgctaacatcaaatggggtgatgctggtgctgagtatgtcgtggagtctactggcgtcttcaccaccatggagaaggctggggctcacctgaagggtggggccaaaagggtcatcatctccgccccttccgctgatgcccccatgtttgtgatgggtgtgaaccacgagaaatatgacaactccctcaagattgtcagcaatgcatcctgcaccaccaactgcttagcccccctggccaaggtcatccatgacaactttggcatcgtggaagggctcatgaccacagtccatgccatcactgccactcagaagactgtggatggcccctctggaaagctgtggcgtgatggccgtggggcagcccagaacatcatccctgcatccactggtgctgccaaggctgtgggcaaggtcatcccagagctgaacgggaagctcactggcatggccttccgtgttcctacccccaatgtatccgttgtggatctgacatgccgcctggagaaacctgccaagtatgatgacatcaagaaggtggtgaagcaggcggccgagggcccactaaagggcatcctgggctacactgaggaccaggttgtctcctgtgacttcaacagcaactcccattcttccacctttgatgctggggctggcattgctctcaatgacaactttgtgaagctcatttcctggtatgacaatgaatatggctacagcaacagggtggtggacctcatggcctacatggcctccaaggagtaagaaaccctggaccacccagcccagcaaggatactgagagcaagagagaggccctcagttgctgaggagtccccatcccaactcagcccccaacactgagcatctccctcacaattccatcccagaccccataacaacaggagaggcctggggagccctcccttctctcgaataccatcaataaagttcgctgcaccctcttaaaaaaaaataaaa
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Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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