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Previous release (v1)
2024-04-18 18:17:04, GGRNA.v2 : RefSeq release 222 (Jan, 2024)
LOCUS NM_053355 3525 bp mRNA linear ROD 22-MAR-2023
DEFINITION Rattus norvegicus inhibitor of nuclear factor kappa B kinase
subunit beta (Ikbkb), mRNA.
ACCESSION NM_053355
VERSION NM_053355.3
KEYWORDS RefSeq; RefSeq Select.
SOURCE Rattus norvegicus (Norway rat)
ORGANISM Rattus norvegicus
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
Muroidea; Muridae; Murinae; Rattus.
REFERENCE 1 (bases 1 to 3525)
AUTHORS Yang J, Li H, Zhang C and Zhou Y.
TITLE Indoxyl sulfate reduces Ito,f by activating ROS/MAPK and NF-kappaB
signaling pathways
JOURNAL JCI Insight 7 (3), e145475 (2022)
PUBMED 35132967
REMARK GeneRIF: Indoxyl sulfate reduces Ito,f by activating ROS/MAPK and
NF-kappaB signaling pathways.
Publication Status: Online-Only
REFERENCE 2 (bases 1 to 3525)
AUTHORS Lee S, Shin HJ, Noh C, Kim SI, Ko YK, Lee SY, Lim C, Hong B, Yang
SY, Kim DW, Lee WH and Kim YH.
TITLE IKBKB siRNA-Encapsulated Poly (Lactic-co-Glycolic Acid)
Nanoparticles Diminish Neuropathic Pain by Inhibiting Microglial
Activation
JOURNAL Int J Mol Sci 22 (11), 5657 (2021)
PUBMED 34073390
REMARK GeneRIF: IKBKB siRNA-Encapsulated Poly (Lactic-co-Glycolic Acid)
Nanoparticles Diminish Neuropathic Pain by Inhibiting Microglial
Activation.
Publication Status: Online-Only
REFERENCE 3 (bases 1 to 3525)
AUTHORS Li M, Guo Q, Cai H, Wang H, Ma Z and Zhang X.
TITLE miR-218 regulates diabetic nephropathy via targeting IKK-beta and
modulating NK-kappaB-mediated inflammation
JOURNAL J Cell Physiol 235 (4), 3362-3371 (2020)
PUBMED 31549412
REMARK GeneRIF: miR-218 regulates diabetic nephropathy via targeting
IKK-beta and modulating NK-kappaB-mediated inflammation.
REFERENCE 4 (bases 1 to 3525)
AUTHORS Wei SF, Sun JJ, Zhou N, Li XL, Lin Y, Zhang YD, Zhang YR and Wu LY.
TITLE Protective effect of RNA interference targeting Ikkbeta on hepatic
fibrosis in rats
JOURNAL J Cell Biochem 120 (11), 18894-18900 (2019)
PUBMED 31297885
REMARK GeneRIF: Protective effect of RNA interference targeting Ikkbeta on
hepatic fibrosis in rats.
REFERENCE 5 (bases 1 to 3525)
AUTHORS Dondelinger Y, Delanghe T, Priem D, Wynosky-Dolfi MA, Sorobetea D,
Rojas-Rivera D, Giansanti P, Roelandt R, Gropengiesser J,
Ruckdeschel K, Savvides SN, Heck AJR, Vandenabeele P, Brodsky IE
and Bertrand MJM.
TITLE Serine 25 phosphorylation inhibits RIPK1 kinase-dependent cell
death in models of infection and inflammation
JOURNAL Nat Commun 10 (1), 1729 (2019)
PUBMED 30988283
REMARK Publication Status: Online-Only
REFERENCE 6 (bases 1 to 3525)
AUTHORS Kupfer R and Scheinman RI.
TITLE Measurement of IKK activity in primary rat T cells: rapid
activation and inactivation
JOURNAL J Immunol Methods 266 (1-2), 155-164 (2002)
PUBMED 12133632
REFERENCE 7 (bases 1 to 3525)
AUTHORS Pasparakis M, Courtois G, Hafner M, Schmidt-Supprian M, Nenci A,
Toksoy A, Krampert M, Goebeler M, Gillitzer R, Israel A, Krieg T,
Rajewsky K and Haase I.
TITLE TNF-mediated inflammatory skin disease in mice with
epidermis-specific deletion of IKK2
JOURNAL Nature 417 (6891), 861-866 (2002)
PUBMED 12075355
REFERENCE 8 (bases 1 to 3525)
AUTHORS Chang NS.
TITLE The non-ankyrin C terminus of Ikappa Balpha physically interacts
with p53 in vivo and dissociates in response to apoptotic stress,
hypoxia, DNA damage, and transforming growth factor-beta 1-mediated
growth suppression
JOURNAL J Biol Chem 277 (12), 10323-10331 (2002)
PUBMED 11799106
REFERENCE 9 (bases 1 to 3525)
AUTHORS Zhang Y, Sun S, Chen WC, Kaluzhny Y, Chinnappan D, Yu G and Ravid
K.
TITLE Repression of AIM-1 kinase mRNA as part of a program of genes
regulated by Mpl ligand
JOURNAL Biochem Biophys Res Commun 282 (3), 844-849 (2001)
PUBMED 11401541
REFERENCE 10 (bases 1 to 3525)
AUTHORS Nemoto S, DiDonato JA and Lin A.
TITLE Coordinate regulation of IkappaB kinases by mitogen-activated
protein kinase kinase kinase 1 and NF-kappaB-inducing kinase
JOURNAL Mol Cell Biol 18 (12), 7336-7343 (1998)
PUBMED 9819420
COMMENT VALIDATED REFSEQ: This record has undergone validation or
preliminary review. The reference sequence was derived from
JACYVU010000283.1.
On Nov 27, 2020 this sequence version replaced NM_053355.2.
Publication Note: This RefSeq record includes a subset of the
publications that are available for this gene. Please see the Gene
record to access additional publications.
##Evidence-Data-START##
Transcript exon combination :: SRR8487231.111302.1 [ECO:0000332]
RNAseq introns :: single sample supports all introns
SAMD00132261, SAMD00132262
[ECO:0000348]
##Evidence-Data-END##
##RefSeq-Attributes-START##
RefSeq Select criteria :: based on conservation, expression,
longest protein
##RefSeq-Attributes-END##
PRIMARY REFSEQ_SPAN PRIMARY_IDENTIFIER PRIMARY_SPAN COMP
1-83 JACYVU010000283.1 18495577-18495659
84-210 JACYVU010000283.1 18495931-18496057
211-305 JACYVU010000283.1 18507242-18507336
306-423 JACYVU010000283.1 18508705-18508822
424-493 JACYVU010000283.1 18511444-18511513
494-582 JACYVU010000283.1 18522123-18522211
583-672 JACYVU010000283.1 18523199-18523288
673-797 JACYVU010000283.1 18526734-18526858
798-905 JACYVU010000283.1 18530417-18530524
906-1035 JACYVU010000283.1 18533499-18533628
1036-1230 JACYVU010000283.1 18534493-18534687
1231-1345 JACYVU010000283.1 18535294-18535408
1346-1469 JACYVU010000283.1 18537558-18537681
1470-1621 JACYVU010000283.1 18538250-18538401
1622-1683 JACYVU010000283.1 18538530-18538591
1684-1793 JACYVU010000283.1 18539877-18539986
1794-1843 JACYVU010000283.1 18541183-18541232
1844-1943 JACYVU010000283.1 18541330-18541429
1944-2091 JACYVU010000283.1 18541606-18541753
2092-2219 JACYVU010000283.1 18544208-18544335
2220-2310 JACYVU010000283.1 18547200-18547290
2311-3525 JACYVU010000283.1 18548059-18549273
FEATURES Location/Qualifiers
source 1..3525
/organism="Rattus norvegicus"
/mol_type="mRNA"
/strain="BN"
/db_xref="taxon:10116"
/chromosome="16"
/map="16q12.5"
gene 1..3525
/gene="Ikbkb"
/gene_synonym="AIM-1; IKK2"
/note="inhibitor of nuclear factor kappa B kinase subunit
beta"
/db_xref="GeneID:84351"
/db_xref="RGD:621375"
exon 1..83
/gene="Ikbkb"
/gene_synonym="AIM-1; IKK2"
/inference="alignment:Splign:2.1.0"
misc_feature 58..60
/gene="Ikbkb"
/gene_synonym="AIM-1; IKK2"
/note="upstream in-frame stop codon"
exon 84..210
/gene="Ikbkb"
/gene_synonym="AIM-1; IKK2"
/inference="alignment:Splign:2.1.0"
CDS 106..2379
/gene="Ikbkb"
/gene_synonym="AIM-1; IKK2"
/EC_number="2.7.11.1"
/EC_number="2.7.11.10"
/note="IKK-B; NFKBIKB; IKK-beta; I-kappa-B kinase 2;
I-kappa-B-kinase beta; nuclear factor NF-kappa-B inhibitor
kinase beta; inhibitor of nuclear factor kappa B kinase
beta subunit; inhibitor of kappaB kinase beta; inhibitor
of kappa light polypeptide gene enhancer in B-cells,
kinase beta; serine/threonine protein kinase IKBKB"
/codon_start=1
/product="inhibitor of nuclear factor kappa-B kinase
subunit beta"
/protein_id="NP_445807.2"
/db_xref="GeneID:84351"
/db_xref="RGD:621375"
/translation="
MSWSPSLPTQTCGAWEMKERLGTGGFGNVIRWHNQVTGEQIAIKQCRQELSPKNRDRWCLEIQIMRRLNHPNVVAARDVPEGMQNLAPNDLPLLAMEYCQGGDLRRYLNQFENCCGLREGAILTLLSDIASALRYLHENRIIHRDLKPENIVLQQGEKRLIHKIIDLGYAKELDQGSLCTSFVGTLQYLAPELLEQQKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHSKVRQKSEVDIVVSEDLNGTVKFSSSLPFPNNLNSVLAERLEKWLQLMLTWQPRQRGVDPQYGPNGCFRALDDILNLKLVHILNMVTGTIHTYPVMEDESLQSLKTRIREDTGILETDQELLQEAGLVLLPDKPATQCISDSKTNEGLTLDMDLVFLFDNSKMSYETQITPRPQPESVSCVLQEPKRNLSFFQMRKVWGQVWHSIQTLKEDCNRLQQGQRAAMMNLLRNNSCLSKMKNAMASTAQQLKAKLDFFKTSIQIDLEKYREQTEFGITSDKLLLAWREMEQAVEQCGRENDVKVLVERMMALQTDIVDLQRSPMGRKQGGTLDDLEEQARELYRRLREKPRDQRTEGDSQDMVRLLLQAIQSFEKKVRVIYSQLSKTVVCKQKALELLPKVEEVVRLMNEDEKTVVRLQEKRQKELWNLLKIACSKVRGPVSGSPDSMNVSRLSHPGHLMSQPSSACDSLPDSDKKSEELVAEAHALCSRLESALQDTVKQQDRSFTTLDWSWLQMEDEERCGLEQACD"
misc_feature 163..1032
/gene="Ikbkb"
/gene_synonym="AIM-1; IKK2"
/note="Catalytic domain of the Serine/Threonine kinase,
Inhibitor of Nuclear Factor-KappaB Kinase (IKK) beta;
Region: STKc_IKK_beta; cd14038"
/db_xref="CDD:270940"
misc_feature order(166..180,190..192,229..231,235..237,325..327,
391..402,412..414,418..420,538..540,544..546,550..555,
559..561,601..603,610..612,655..666)
/gene="Ikbkb"
/gene_synonym="AIM-1; IKK2"
/note="active site"
/db_xref="CDD:270940"
misc_feature order(166..180,190..192,229..231,235..237,325..327,
391..402,412..414,538..540,544..546,550..555,559..561,
601..603)
/gene="Ikbkb"
/gene_synonym="AIM-1; IKK2"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:270940"
misc_feature order(178..180,412..414,418..420,538..540,544..546,
550..552,610..612,655..666)
/gene="Ikbkb"
/gene_synonym="AIM-1; IKK2"
/note="polypeptide substrate binding site [polypeptide
binding]; other site"
/db_xref="CDD:270940"
misc_feature order(430..432,436..438,445..450,457..459,760..762,
775..777,859..864,868..870,886..897)
/gene="Ikbkb"
/gene_synonym="AIM-1; IKK2"
/note="SDD interface [polypeptide binding]; other site"
/db_xref="CDD:270940"
misc_feature order(466..468,472..477,577..582)
/gene="Ikbkb"
/gene_synonym="AIM-1; IKK2"
/note="ULD interface [polypeptide binding]; other site"
/db_xref="CDD:270940"
misc_feature 598..666
/gene="Ikbkb"
/gene_synonym="AIM-1; IKK2"
/note="activation loop (A-loop); other site"
/db_xref="CDD:270940"
misc_feature 634..636
/gene="Ikbkb"
/gene_synonym="AIM-1; IKK2"
/note="Phosphoserine, by TBK1 and PKC/PRKCZ.
/evidence=ECO:0000250|UniProtKB:O14920; propagated from
UniProtKB/Swiss-Prot (Q9QY78.1); phosphorylation site"
misc_feature 646..648
/gene="Ikbkb"
/gene_synonym="AIM-1; IKK2"
/note="Phosphoserine, by TBK1, PKC/PRKCZ and PDPK1.
/evidence=ECO:0000250|UniProtKB:O14920; propagated from
UniProtKB/Swiss-Prot (Q9QY78.1); phosphorylation site"
misc_feature 676..678
/gene="Ikbkb"
/gene_synonym="AIM-1; IKK2"
/note="Hydroxyproline. /evidence=ECO:0000250; propagated
from UniProtKB/Swiss-Prot (Q9QY78.1); hydroxylation site"
misc_feature order(790..792,796..801,811..813)
/gene="Ikbkb"
/gene_synonym="AIM-1; IKK2"
/note="tetramer interface [polypeptide binding]; other
site"
/db_xref="CDD:270940"
misc_feature 1033..1275
/gene="Ikbkb"
/gene_synonym="AIM-1; IKK2"
/note="ubiquitin-like (Ubl) domain found in inhibitor of
nuclear factor kappa-B kinases, IKK-alpha and IKK-beta,
and similar proteins; Region: Ubl_IKKA_like; cd17046"
/db_xref="CDD:340566"
misc_feature 1270..2094
/gene="Ikbkb"
/gene_synonym="AIM-1; IKK2"
/note="IQBAL scaffold dimerization domain; Region:
IKBKB_SDD; pfam18397"
/db_xref="CDD:436466"
misc_feature 1477..1542
/gene="Ikbkb"
/gene_synonym="AIM-1; IKK2"
/note="propagated from UniProtKB/Swiss-Prot (Q9QY78.1);
Region: Leucine-zipper"
misc_feature 2113..2115
/gene="Ikbkb"
/gene_synonym="AIM-1; IKK2"
/note="Phosphoserine, by autocatalysis.
/evidence=ECO:0000250|UniProtKB:O14920; propagated from
UniProtKB/Swiss-Prot (Q9QY78.1); phosphorylation site"
misc_feature 2119..2121
/gene="Ikbkb"
/gene_synonym="AIM-1; IKK2"
/note="Phosphoserine.
/evidence=ECO:0007744|PubMed:22673903; propagated from
UniProtKB/Swiss-Prot (Q9QY78.1); phosphorylation site"
misc_feature 2128..2130
/gene="Ikbkb"
/gene_synonym="AIM-1; IKK2"
/note="Phosphoserine, by autocatalysis.
/evidence=ECO:0000250|UniProtKB:O14920; propagated from
UniProtKB/Swiss-Prot (Q9QY78.1); phosphorylation site"
misc_feature 2149..2214
/gene="Ikbkb"
/gene_synonym="AIM-1; IKK2"
/note="propagated from UniProtKB/Swiss-Prot (Q9QY78.1);
Region: Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite"
misc_feature 2149..2151
/gene="Ikbkb"
/gene_synonym="AIM-1; IKK2"
/note="Phosphoserine, by autocatalysis.
/evidence=ECO:0000250|UniProtKB:O14920; propagated from
UniProtKB/Swiss-Prot (Q9QY78.1); phosphorylation site"
misc_feature 2170..2172
/gene="Ikbkb"
/gene_synonym="AIM-1; IKK2"
/note="Phosphoserine, by autocatalysis.
/evidence=ECO:0000250|UniProtKB:O14920; propagated from
UniProtKB/Swiss-Prot (Q9QY78.1); phosphorylation site"
misc_feature 2179..2181
/gene="Ikbkb"
/gene_synonym="AIM-1; IKK2"
/note="Phosphoserine, by autocatalysis.
/evidence=ECO:0000250|UniProtKB:O14920; propagated from
UniProtKB/Swiss-Prot (Q9QY78.1); phosphorylation site"
misc_feature 2194..2196
/gene="Ikbkb"
/gene_synonym="AIM-1; IKK2"
/note="Phosphoserine, by autocatalysis.
/evidence=ECO:0000250|UniProtKB:O14920; propagated from
UniProtKB/Swiss-Prot (Q9QY78.1); phosphorylation site"
misc_feature 2218..2220
/gene="Ikbkb"
/gene_synonym="AIM-1; IKK2"
/note="Phosphoserine, by autocatalysis.
/evidence=ECO:0000250|UniProtKB:O14920; propagated from
UniProtKB/Swiss-Prot (Q9QY78.1); phosphorylation site"
misc_feature 2221..2331
/gene="Ikbkb"
/gene_synonym="AIM-1; IKK2"
/note="I-kappa-kinase-beta NEMO binding domain; Region:
IKKbetaNEMObind; pfam12179"
/db_xref="CDD:432387"
misc_feature 2302..2304
/gene="Ikbkb"
/gene_synonym="AIM-1; IKK2"
/note="Phosphoserine, by autocatalysis.
/evidence=ECO:0000250|UniProtKB:O14920; propagated from
UniProtKB/Swiss-Prot (Q9QY78.1); phosphorylation site"
misc_feature 2314..2331
/gene="Ikbkb"
/gene_synonym="AIM-1; IKK2"
/note="propagated from UniProtKB/Swiss-Prot (Q9QY78.1);
Region: NEMO-binding"
misc_feature 2323..2325
/gene="Ikbkb"
/gene_synonym="AIM-1; IKK2"
/note="Phosphoserine, by autocatalysis.
/evidence=ECO:0000250|UniProtKB:O14920; propagated from
UniProtKB/Swiss-Prot (Q9QY78.1); phosphorylation site"
exon 211..305
/gene="Ikbkb"
/gene_synonym="AIM-1; IKK2"
/inference="alignment:Splign:2.1.0"
exon 306..423
/gene="Ikbkb"
/gene_synonym="AIM-1; IKK2"
/inference="alignment:Splign:2.1.0"
exon 424..493
/gene="Ikbkb"
/gene_synonym="AIM-1; IKK2"
/inference="alignment:Splign:2.1.0"
exon 494..582
/gene="Ikbkb"
/gene_synonym="AIM-1; IKK2"
/inference="alignment:Splign:2.1.0"
exon 583..672
/gene="Ikbkb"
/gene_synonym="AIM-1; IKK2"
/inference="alignment:Splign:2.1.0"
exon 673..797
/gene="Ikbkb"
/gene_synonym="AIM-1; IKK2"
/inference="alignment:Splign:2.1.0"
exon 798..905
/gene="Ikbkb"
/gene_synonym="AIM-1; IKK2"
/inference="alignment:Splign:2.1.0"
exon 906..1035
/gene="Ikbkb"
/gene_synonym="AIM-1; IKK2"
/inference="alignment:Splign:2.1.0"
exon 1036..1230
/gene="Ikbkb"
/gene_synonym="AIM-1; IKK2"
/inference="alignment:Splign:2.1.0"
exon 1231..1345
/gene="Ikbkb"
/gene_synonym="AIM-1; IKK2"
/inference="alignment:Splign:2.1.0"
exon 1346..1469
/gene="Ikbkb"
/gene_synonym="AIM-1; IKK2"
/inference="alignment:Splign:2.1.0"
exon 1470..1621
/gene="Ikbkb"
/gene_synonym="AIM-1; IKK2"
/inference="alignment:Splign:2.1.0"
exon 1622..1683
/gene="Ikbkb"
/gene_synonym="AIM-1; IKK2"
/inference="alignment:Splign:2.1.0"
exon 1684..1793
/gene="Ikbkb"
/gene_synonym="AIM-1; IKK2"
/inference="alignment:Splign:2.1.0"
exon 1794..1843
/gene="Ikbkb"
/gene_synonym="AIM-1; IKK2"
/inference="alignment:Splign:2.1.0"
exon 1844..1943
/gene="Ikbkb"
/gene_synonym="AIM-1; IKK2"
/inference="alignment:Splign:2.1.0"
exon 1944..2091
/gene="Ikbkb"
/gene_synonym="AIM-1; IKK2"
/inference="alignment:Splign:2.1.0"
exon 2092..2219
/gene="Ikbkb"
/gene_synonym="AIM-1; IKK2"
/inference="alignment:Splign:2.1.0"
exon 2220..2310
/gene="Ikbkb"
/gene_synonym="AIM-1; IKK2"
/inference="alignment:Splign:2.1.0"
exon 2311..3525
/gene="Ikbkb"
/gene_synonym="AIM-1; IKK2"
/inference="alignment:Splign:2.1.0"
ORIGIN
tggcgctgagctggctgcgtggggaccccgagttttcatgtcctcagcgggtgtcgctagcggccccgcggcccccggggcagagttagcagggagggcatcgatatgagctggtcaccttctctcccaacccagacatgtggggcctgggaaatgaaagaacgcctcggaactgggggatttggaaacgtcatccggtggcacaatcaggtgacaggtgaacaaattgccatcaagcaatgccgacaggagctcagccccaagaaccgcgatcgctggtgcctagagatccagatcatgagaaggctgaaccatcccaacgtggtggccgcccgggatgtcccagaggggatgcagaacttggcacccaatgatttgcctctgctggccatggagtactgccaaggaggagacctccggagatacttgaaccagttcgaaaactgctgtggcctccgggaaggagccatcctcaccctgctgagtgacatagcatcggctcttagataccttcatgaaaacagaatcatccaccgggacctgaagccagagaacattgtcctacagcaaggagagaaaagattaatacacaaaattattgatctaggatatgccaaggagctggatcagggcagtctgtgcacgtcatttgtggggaccctgcaatacctggccccagagcttctggagcagcagaagtacaccgtgactgttgactactggagcttcggcaccctggcctttgaatgcatcaccggcttccggccctttctccctaactggcagcctgtgcagtggcactctaaagtccggcagaagagcgaagtggacattgttgttagcgaggacttgaacggaacagtgaagttctcaagttccttacccttccccaataatctcaacagtgtcctggctgagcgtctggagaagtggcttcagctgatgctcacgtggcaacctcggcaaaggggcgtggacccccagtacggtcccaatggctgtttcagggccctcgatgacatcttgaacttaaagctggttcatatcttgaacatggtcacaggcaccattcacacataccctgtgatggaggatgaaagtctgcagagcttaaaaaccagaatccgggaagacacagggatcctggagacagaccaggaactgctgcaggaggcagggctggtgctgctccctgacaagcctgctactcagtgcatctcagacagcaagacaaatgagggcctcacactggacatggatctcgtctttctctttgacaacagtaaaatgtcctatgagactcagatcaccccccgaccccaacctgagagcgtcagctgtgtccttcaggagcccaagcggaacctctccttcttccagatgaggaaagtgtggggccaagtctggcacagcatccaaacgctgaaggaagactgtaaccggctgcagcagggacagcgagctgccatgatgaacctccttcggaataacagctgcctctccaagatgaagaatgccatggcctccacggcgcagcagctcaaggccaagttggacttcttcaaaaccagcatccagattgacctggagaagtacagggagcagacggagtttggcatcacatcggacaaactgctgctggcctggcgggaaatggagcaggccgtggagcagtgtgggcgggagaatgacgtgaaggtcctggtagaacggatgatggcactgcagaccgacattgtggacctacagaggagcccgatgggtcggaagcaggggggcaccttggatgacctagaggaacaagcaagagaactctacagaagactcagggagaagccaagagaccaaaggacagaaggtgacagccaggatatggtacggctgctgctgcaagccatccagagcttcgagaagaaagtgcgggtgatttactctcagctcagtaagaccgtggtttgtaagcagaaggccctggagctgctgcccaaagtagaagaggtggtgaggctcatgaacgaggatgagaagactgtggtccggctccaggagaagcggcagaaggagctctggaacctcctgaagatcgcctgtagcaaagtccgaggtccggtgagtggaagcccagatagcatgaatgtgtctcgacttagtcaccctggtcatctaatgtcccagccttccagtgcctgtgacagcttacctgattcagacaagaaaagtgaagaactggtggccgaagcacacgccctctgctcccggctggaaagcgcgctgcaggacacggtgaagcagcaggaccgaagcttcacgaccctagactggagctggttacagatggaggatgaagaaaggtgtggcctggagcaggcctgtgactgaggtgcccgtgaactggcccgcggctcggcatgtgaggatgctctggtacctccagggggacatcccgctctcctggcagctgcgatccttgcccacagcagcctgtgctggcccagtctacacactggacgtcctccaccacagaagcacaacaatgtcagttacaagcccgtgcggcaacaagactgcagtgctgctacacaaagagcttacgacagacgtctaccttgagtgtttccagacagcagccagcctgtcccctttggactgctgcgggggagggagccctgccctcctcgcctttcagctggggtgtcatctggatccagcttccttagacatttaatcagaagcctgatgattctacgtctttcttcctcttcacttccccctggtaaatgtttctaccttctgtgccggtcgttgtggcaaacggcctttgactaagttgtaatgacggtgataccaagctccctgatgtcccggctcctttaagccacagagcgacttacacagccaggcagaacagaaatgcagctacacatcctgagtcccaaagattacctggagtcaactgtcatggagagaaatggaagatgaaggtcctacaccagcccctcccctgctgagcactgtgtgactctgccacctgtcaggtgtgtgaggacgttgctgcctctcacataagctagcagcgttattaaactggttcgttttataaatagtttctattttttgtaacattactcagatatgtatcctaggctcaagggtgtatttccacagtaatactaccactagtacttctgagctcagagggcaacatcatgggaaatttcgtaagattgaacagcgtatctagatcatgtcatttttacatcacacaaaacttgtgtgtttgcgtgcatatgtgtgtatgaaagcgaagcaggctcagattgtcataaacaggtttatttgattagagaataaagttggaacagagaaatgtcagagcggccaccgcagacacagtatgaagcgtcactggtcacgtgagctcagcggtgctgcatgctttctttcccagagattgatgctgtgcactgggaacctgtttgaaaactccgacaataaagatgctggcttaagctcagcgtaaattca
//
by
@meso_cacase at
DBCLS
This page is licensed under a
Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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