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Previous release (v1)
2024-11-01 10:31:29, GGRNA.v2 : RefSeq release 226 (Sep, 2024)
LOCUS NM_001427260 6587 bp mRNA linear ROD 03-APR-2024
DEFINITION Rattus norvegicus collagen type IV alpha 6 chain (Col4a6), mRNA.
ACCESSION NM_001427260 XM_039100524
VERSION NM_001427260.1
KEYWORDS RefSeq; RefSeq Select.
SOURCE Rattus norvegicus (Norway rat)
ORGANISM Rattus norvegicus
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
Muroidea; Muridae; Murinae; Rattus.
REFERENCE 1 (bases 1 to 6587)
AUTHORS Pogribny,I.P., Starlard-Davenport,A., Tryndyak,V.P., Han,T.,
Ross,S.A., Rusyn,I. and Beland,F.A.
TITLE Difference in expression of hepatic microRNAs miR-29c, miR-34a,
miR-155, and miR-200b is associated with strain-specific
susceptibility to dietary nonalcoholic steatohepatitis in mice
JOURNAL Lab Invest 90 (10), 1437-1446 (2010)
PUBMED 20548288
REFERENCE 2 (bases 1 to 6587)
AUTHORS Bai,X., Dilworth,D.J., Weng,Y.C. and Gould,D.B.
TITLE Developmental distribution of collagen IV isoforms and relevance to
ocular diseases
JOURNAL Matrix Biol 28 (4), 194-201 (2009)
PUBMED 19275937
REFERENCE 3 (bases 1 to 6587)
AUTHORS Manabe,R., Tsutsui,K., Yamada,T., Kimura,M., Nakano,I., Shimono,C.,
Sanzen,N., Furutani,Y., Fukuda,T., Oguri,Y., Shimamoto,K.,
Kiyozumi,D., Sato,Y., Sado,Y., Senoo,H., Yamashina,S., Fukuda,S.,
Kawai,J., Sugiura,N., Kimata,K., Hayashizaki,Y. and Sekiguchi,K.
TITLE Transcriptome-based systematic identification of extracellular
matrix proteins
JOURNAL Proc Natl Acad Sci U S A 105 (35), 12849-12854 (2008)
PUBMED 18757743
REFERENCE 4 (bases 1 to 6587)
AUTHORS Shindo,T., Manabe,I., Fukushima,Y., Tobe,K., Aizawa,K.,
Miyamoto,S., Kawai-Kowase,K., Moriyama,N., Imai,Y., Kawakami,H.,
Nishimatsu,H., Ishikawa,T., Suzuki,T., Morita,H., Maemura,K.,
Sata,M., Hirata,Y., Komukai,M., Kagechika,H., Kadowaki,T.,
Kurabayashi,M. and Nagai,R.
TITLE Kruppel-like zinc-finger transcription factor KLF5/BTEB2 is a
target for angiotensin II signaling and an essential regulator of
cardiovascular remodeling
JOURNAL Nat Med 8 (8), 856-863 (2002)
PUBMED 12101409
REFERENCE 5 (bases 1 to 6587)
AUTHORS Nagai,N., Nakano,K., Sado,Y., Naito,I., Gunduz,M., Tsujigiwa,H.,
Nagatsuka,H., Ninomiya,Y. and Siar,C.H.
TITLE Localization of type IV collagen a 1 to a 6 chains in basement
membrane during mouse molar germ development
JOURNAL Int J Dev Biol 45 (7), 827-831 (2001)
PUBMED 11732842
REFERENCE 6 (bases 1 to 6587)
AUTHORS Bhatt,R.S., Tomoda,T., Fang,Y. and Hatten,M.E.
TITLE Discoidin domain receptor 1 functions in axon extension of
cerebellar granule neurons
JOURNAL Genes Dev 14 (17), 2216-2228 (2000)
PUBMED 10970885
REFERENCE 7 (bases 1 to 6587)
AUTHORS Saito,K., Naito,I., Seki,T., Oohashi,T., Kimura,E., Momota,R.,
Kishiro,Y., Sado,Y., Yoshioka,H. and Ninomiya,Y.
TITLE Differential expression of mouse alpha5(IV) and alpha6(IV) collagen
genes in epithelial basement membranes
JOURNAL J Biochem 128 (3), 427-434 (2000)
PUBMED 10965041
REFERENCE 8 (bases 1 to 6587)
AUTHORS Lu,W., Phillips,C.L., Killen,P.D., Hlaing,T., Harrison,W.R.,
Elder,F.F., Miner,J.H., Overbeek,P.A. and Meisler,M.H.
TITLE Insertional mutation of the collagen genes Col4a3 and Col4a4 in a
mouse model of Alport syndrome
JOURNAL Genomics 61 (2), 113-124 (1999)
PUBMED 10534397
COMMENT VALIDATED REFSEQ: This record has undergone validation or
preliminary review. The reference sequence was derived from
JAXUCZ010000021.1.
On Jan 17, 2024 this sequence version replaced XM_039100524.1.
##Evidence-Data-START##
Transcript exon combination :: SRR26643299.68499.1,
SRR26643294.62946.1 [ECO:0000332]
RNAseq introns :: mixed sample support SAMEA5760383,
SAMEA5760386 [ECO:0006172]
##Evidence-Data-END##
##RefSeq-Attributes-START##
RefSeq Select criteria :: based on single protein-coding transcript
##RefSeq-Attributes-END##
COMPLETENESS: full length.
PRIMARY REFSEQ_SPAN PRIMARY_IDENTIFIER PRIMARY_SPAN COMP
1-229 JAXUCZ010000021.1 109905716-109905944 c
230-281 JAXUCZ010000021.1 109905472-109905523 c
282-362 JAXUCZ010000021.1 109721497-109721577 c
363-497 JAXUCZ010000021.1 109624168-109624302 c
498-542 JAXUCZ010000021.1 109620767-109620811 c
543-659 JAXUCZ010000021.1 109618446-109618562 c
660-728 JAXUCZ010000021.1 109615875-109615943 c
729-764 JAXUCZ010000021.1 109614258-109614293 c
765-827 JAXUCZ010000021.1 109611036-109611098 c
828-863 JAXUCZ010000021.1 109609667-109609702 c
864-905 JAXUCZ010000021.1 109609445-109609486 c
906-998 JAXUCZ010000021.1 109608150-109608242 c
999-1052 JAXUCZ010000021.1 109605792-109605845 c
1053-1112 JAXUCZ010000021.1 109597802-109597861 c
1113-1157 JAXUCZ010000021.1 109596789-109596833 c
1158-1211 JAXUCZ010000021.1 109596272-109596325 c
1212-1281 JAXUCZ010000021.1 109595503-109595572 c
1282-1389 JAXUCZ010000021.1 109594340-109594447 c
1390-1539 JAXUCZ010000021.1 109593078-109593227 c
1540-1644 JAXUCZ010000021.1 109591475-109591579 c
1645-1805 JAXUCZ010000021.1 109590382-109590542 c
1806-1985 JAXUCZ010000021.1 109589518-109589697 c
1986-2169 JAXUCZ010000021.1 109588660-109588843 c
2170-2241 JAXUCZ010000021.1 109583522-109583593 c
2242-2349 JAXUCZ010000021.1 109583219-109583326 c
2350-2571 JAXUCZ010000021.1 109582016-109582237 c
2572-2733 JAXUCZ010000021.1 109581492-109581653 c
2734-2904 JAXUCZ010000021.1 109579626-109579796 c
2905-3048 JAXUCZ010000021.1 109578691-109578834 c
3049-3174 JAXUCZ010000021.1 109577682-109577807 c
3175-3356 JAXUCZ010000021.1 109577062-109577243 c
3357-3420 JAXUCZ010000021.1 109572671-109572734 c
3421-3495 JAXUCZ010000021.1 109572035-109572109 c
3496-3603 JAXUCZ010000021.1 109571486-109571593 c
3604-3711 JAXUCZ010000021.1 109571285-109571392 c
3712-3783 JAXUCZ010000021.1 109568991-109569062 c
3784-3909 JAXUCZ010000021.1 109568412-109568537 c
3910-4026 JAXUCZ010000021.1 109564676-109564792 c
4027-4188 JAXUCZ010000021.1 109564210-109564371 c
4189-4287 JAXUCZ010000021.1 109563960-109564058 c
4288-4434 JAXUCZ010000021.1 109562006-109562152 c
4435-4551 JAXUCZ010000021.1 109561428-109561544 c
4552-4743 JAXUCZ010000021.1 109559093-109559284 c
4744-5030 JAXUCZ010000021.1 109558109-109558395 c
5031-6587 JAXUCZ010000021.1 109554945-109556501 c
FEATURES Location/Qualifiers
source 1..6587
/organism="Rattus norvegicus"
/mol_type="mRNA"
/strain="BN"
/db_xref="taxon:10116"
/chromosome="X"
/map="Xq33"
gene 1..6587
/gene="Col4a6"
/note="collagen type IV alpha 6 chain"
/db_xref="GeneID:363458"
/db_xref="RGD:1589724"
exon 1..229
/gene="Col4a6"
/inference="alignment:Splign:2.1.0"
misc_feature 156..158
/gene="Col4a6"
/note="upstream in-frame stop codon"
CDS 219..5291
/gene="Col4a6"
/note="collagen, type IV, alpha 6; collagen alpha-6(IV)
chain"
/codon_start=1
/product="collagen alpha-6(IV) chain precursor"
/protein_id="NP_001414189.1"
/db_xref="GeneID:363458"
/db_xref="RGD:1589724"
/translation="
MHPGLWLFLVSLCLTKELAEAGQKSYRQPCGGQDCSGACACSPEKGARGHTGPIGTQGPAGPEGFAGPTGLSGLKGERGSPGRLGPYGPKGDKGPIGVPGFVGISGIPGHPGQPGPRGPPGLDGCNGTQGAVGFPGTDGYPGVLGPPGLPGHKGAKGEPASFQGSIIGMKGDPGLPGLHGITGPSGSPGSPGDAGPIGPPGFQGPPGPPGLPGPDGNMGLGFQGEKGIKGDVGLPGPAGPPPSTGELEFMGFPKGEKGSKGEPGPPGFPGRSGLPGVPELGSIGEKGERGILGLPGPRGPVGSEGIQGYPGKQGKKGTSGFPGTNGFPGIKGEKGSIGVRGPDSFTDAEGTVISGFPGDPGVPGLPGLRGDEGIQGQRGPAGTAGLPSLTGLPGALGPQGSPGLKGDRGNSGRTTFGEAGLPGRVGLPGLPGLPGPSGPPGRTFVSGPLLSIEPGLPGLQGEQGLKGHQGIKGVKGDSGFCACEGGAPNIGPHGESGLPGIQGPIGLRGIKGTRGDPGSRGASGPTGTPGLFGPRGQTGLKGKKGEPTVSRGSKMAGDKGDPGPQGIPGLAGAPGKDGIPGLPGFPGTQGDDGSGFPGERGLPGLPGEKGHDGPTGPRGIGLPGLPGPRGLPGDKGVDGLPGQQGLRGAKGVTLPCIIPGSYGPSGFPGAPGFPGSKGARGLPGIPGKPGTHGSKGEPGSPGLIHLPGFPGFPGARGEKGLPGFPGLLGKHGYPGKAGSPGVPGSKGVAGDIFGAENGASGEQGLQGLPGDKGFPGDSGLPGPKGLSGKSGMLGPKGERGNPGTSGPPGQPGPSGSTDPFGIKGTSGLPGAPGLPGISGHPGKKGQRGDIGHPGSTGKRGLPGIKGLPGPQGLAGFLGSPGLSGVTGLPGIPGQKGEKGSSGPVGFPGLPGLPGLPGADGLKGFSGSFGKVGQPGQAGTPGEKGDRGDPGPVGISSPRPPMLNLWFKGEKGSQGSAGSDGFPGPRGDKGEPGIPGLPGAPGAPGQSNTIKGLSGSPGSPGSMGRRGLPGLKGSLGIAGFPGIPGKSGSQGLTGTPGPLGATGIPGLKGDQGPTLGISGSPGPKGQPGELGFKGVKGKDGLVGDRGYPGNKGDSGKVGSAGDPGFPGSPGLKGISGMNGDPGFPGSSGHVGSIGRPGPSGLIGPKGFPGLPGLHGLNGLPGTKGTHGTPGASITGVPGPAGLPGPKGEKGMPGIVIGDPGKQGLRGQKGDQGSPGLQGPAGTPGASGISLPSVIAGQPGDPGQPGLDGERGRPGLPGPPGPPGPSSDQGDPGDSGFPGIPGLQGLKGNQGLPGFSGLSGDLGLKGMRGEPGLMGTPGKIGPPGDPGFPGMKGKAGPRGFSGPQGAPGHTPIAEARHVPPGPLGLPGIDGIPGLTGDPGSQGSVGLQGSKGLPGIPGKDGPSGLPGPSGILGDPGLPGLQGPPGFEGAPGNQGPIGQPGMPGHSVRVGYTLVKHSQSEHVPPCPIGMSQLWVGYSLLFVEGQEKAHNQDLGFAGSCLPRFSTMPFIYCNINEVCHYARRNDKSYWLSTTAPIPMMPVGETQIPQYISRCSVCEAPSQAIAVHSQDITVPQCPLGWHSLWIGYSFLMHTAAGTEGGGQSLVSPGSCLEDFRANPFIECSGARGTCHYFANKYSFWLTTVEERGQFQEQPVSENLKTGQLHTRVSRCQVCMKTP"
sig_peptide 219..281
/gene="Col4a6"
/inference="COORDINATES: ab initio prediction:SignalP:6.0"
exon 230..281
/gene="Col4a6"
/inference="alignment:Splign:2.1.0"
exon 282..362
/gene="Col4a6"
/inference="alignment:Splign:2.1.0"
exon 363..497
/gene="Col4a6"
/inference="alignment:Splign:2.1.0"
exon 498..542
/gene="Col4a6"
/inference="alignment:Splign:2.1.0"
exon 543..659
/gene="Col4a6"
/inference="alignment:Splign:2.1.0"
exon 660..728
/gene="Col4a6"
/inference="alignment:Splign:2.1.0"
exon 729..764
/gene="Col4a6"
/inference="alignment:Splign:2.1.0"
exon 765..827
/gene="Col4a6"
/inference="alignment:Splign:2.1.0"
exon 828..863
/gene="Col4a6"
/inference="alignment:Splign:2.1.0"
exon 864..905
/gene="Col4a6"
/inference="alignment:Splign:2.1.0"
exon 906..998
/gene="Col4a6"
/inference="alignment:Splign:2.1.0"
exon 999..1052
/gene="Col4a6"
/inference="alignment:Splign:2.1.0"
exon 1053..1112
/gene="Col4a6"
/inference="alignment:Splign:2.1.0"
exon 1113..1157
/gene="Col4a6"
/inference="alignment:Splign:2.1.0"
exon 1158..1211
/gene="Col4a6"
/inference="alignment:Splign:2.1.0"
exon 1212..1281
/gene="Col4a6"
/inference="alignment:Splign:2.1.0"
exon 1282..1389
/gene="Col4a6"
/inference="alignment:Splign:2.1.0"
exon 1390..1539
/gene="Col4a6"
/inference="alignment:Splign:2.1.0"
exon 1540..1644
/gene="Col4a6"
/inference="alignment:Splign:2.1.0"
exon 1645..1805
/gene="Col4a6"
/inference="alignment:Splign:2.1.0"
exon 1806..1985
/gene="Col4a6"
/inference="alignment:Splign:2.1.0"
exon 1986..2169
/gene="Col4a6"
/inference="alignment:Splign:2.1.0"
exon 2170..2241
/gene="Col4a6"
/inference="alignment:Splign:2.1.0"
exon 2242..2349
/gene="Col4a6"
/inference="alignment:Splign:2.1.0"
exon 2350..2571
/gene="Col4a6"
/inference="alignment:Splign:2.1.0"
exon 2572..2733
/gene="Col4a6"
/inference="alignment:Splign:2.1.0"
exon 2734..2904
/gene="Col4a6"
/inference="alignment:Splign:2.1.0"
exon 2905..3048
/gene="Col4a6"
/inference="alignment:Splign:2.1.0"
exon 3049..3174
/gene="Col4a6"
/inference="alignment:Splign:2.1.0"
exon 3175..3356
/gene="Col4a6"
/inference="alignment:Splign:2.1.0"
exon 3357..3420
/gene="Col4a6"
/inference="alignment:Splign:2.1.0"
exon 3421..3495
/gene="Col4a6"
/inference="alignment:Splign:2.1.0"
exon 3496..3603
/gene="Col4a6"
/inference="alignment:Splign:2.1.0"
exon 3604..3711
/gene="Col4a6"
/inference="alignment:Splign:2.1.0"
exon 3712..3783
/gene="Col4a6"
/inference="alignment:Splign:2.1.0"
exon 3784..3909
/gene="Col4a6"
/inference="alignment:Splign:2.1.0"
exon 3910..4026
/gene="Col4a6"
/inference="alignment:Splign:2.1.0"
exon 4027..4188
/gene="Col4a6"
/inference="alignment:Splign:2.1.0"
exon 4189..4287
/gene="Col4a6"
/inference="alignment:Splign:2.1.0"
exon 4288..4434
/gene="Col4a6"
/inference="alignment:Splign:2.1.0"
exon 4435..4551
/gene="Col4a6"
/inference="alignment:Splign:2.1.0"
exon 4552..4743
/gene="Col4a6"
/inference="alignment:Splign:2.1.0"
exon 4744..5030
/gene="Col4a6"
/inference="alignment:Splign:2.1.0"
exon 5031..6587
/gene="Col4a6"
/inference="alignment:Splign:2.1.0"
ORIGIN
gagtgttagaagttgtagcgggcaccactgagtgtgttttcctttggggaactttttttctagcagctgattttagtttcttctaaaccaagccacttcgccccccttactgtcctgagtaaggaacaaactgccaagcatcaacgaagcccagatgagcccgcgccgcggagcagcttagcagtctcctgggacccagctccggagcagccacaagcatgcaccctggattgtggctgttcctggtttccttatgcctgaccaaagaactggcagaagcgggacagaagtcctatagacagccatgtgggggccaagactgcagtggagcctgtgcatgctctcctgagaaaggagcaagagggcacactgggccaattggaactcaaggtccagccggtcctgaagggtttgctggtccaactggtttatcagggttgaaaggagaaagaggctccccaggccgtctgggaccatatggacccaaaggagataagggtcccattggagttcctggctttgttggcatcagtgggattccgggacacccaggccaaccaggtccaagaggtccacctggcctagatggatgtaatggaactcaaggagctgttggatttccaggcactgatggctaccctggggttttaggaccacctgggctgcctggtcacaaaggtgcaaaaggagaacctgcttcttttcaaggcagcatcataggaatgaagggggatcctgggctgcctggactgcatggaatcactggtccatcaggatctcctggatctcctggagatgcaggacccataggaccaccaggtttccaaggtccaccaggtccccctggacttcctggtcctgatggaaatatggggttaggtttccaaggagaaaaaggaatcaagggggatgttggcctccctggccctgcaggaccacctccatctactggggaactagaattcatgggattccccaaaggggagaaaggttccaagggtgaaccagggcctccaggtttcccaggcaggagtggccttccaggtgtcccggaacttggatctattggagaaaaaggagaaagggggatccttggattgccaggacctaggggtcccgtgggttcagaaggaatacaaggatatccagggaaacagggaaagaaggggacttcaggttttcctgggactaacgggttcccaggaattaagggtgaaaagggaagcattggtgtgcgaggcccagacagtttcactgatgcagaaggcactgtgatctcaggttttcctggagaccctggtgtgccaggcctcccaggccttagaggagatgaaggcatccagggtcaacgtggccctgctggcactgctggccttccatcgttaacaggtcttccaggtgccctagggcctcagggatctccaggcctgaaaggagaccgagggaactcaggacgtaccacctttggagaagctggcctacctggcagagttggtttgccaggtttaccaggcctgcccggcccatcaggcccacctggtcgcacatttgtgtctggacccctgcttagcatagagcctgggttacctggcctccaaggagaacaaggcctaaaaggacatcaaggcatcaaaggagtaaaaggagactctggcttttgtgcttgtgaaggtggtgcccccaacattggaccacatggggaatcaggcctgcctgggatacaaggtcccattggtctacgtggtattaaagggacaagaggcgatccaggctctaggggcgcatctggccccacagggacaccagggctatttggacctagaggtcagactggcctcaaaggaaagaaaggagaaccaactgtcagtagaggatcaaaaatggcaggggacaaaggtgaccctggtcctcaggggatcccaggtttggcaggagctccaggcaaggatggaataccaggtttaccaggcttcccaggcactcagggagacgatgggtctggcttcccaggtgaaagggggttaccaggacttcctggtgaaaagggccatgatggtccaactggaccacgaggaattgggctgccaggacttcctgggccccgtggacttcctggagataaaggagtggatgggttaccagggcaacaaggcctccgtggagctaaaggagtcaccttgccttgtattatccctgggtcatacggtccatcaggatttcctggagctcccggattcccaggctctaagggagctcggggcctccctgggattccaggcaagcctggcactcacggaagcaaaggagagcctggaagtccagggttaatccatctcccaggatttccaggattccctggagctcgtggggagaagggactgcctggctttcctgggcttctgggaaaacatggctacccgggaaaagctggcagtccaggggtaccaggttccaagggagttgctggtgacatctttggtgctgaaaacggtgcttcgggggaacaaggtctacaaggattgccaggggacaaaggatttcctggagactctggccttccaggacccaagggtttgagcgggaaatctggtatgctaggccccaagggtgagcgagggaaccctggaacatcaggaccaccaggacagccgggaccctcagggtctactgatccatttggtatcaagggcacatctggactcccaggagcaccaggccttccaggcatttcagggcaccctggaaagaagggccaaagaggagacataggtcaccctgggtcaactggaaaacgaggtctccctggaataaaaggccttcctggtcctcaagggttagctggcttcctggggagcccaggtttgtcaggagtcactgggttgccaggcatcccaggccaaaagggtgaaaaggggtcctctggaccagtagggtttcctgggttacctggtcttcctggtcttcctggagctgatggattaaagggattttctgggtcatttggaaaggtgggacaacctggacaggctggtactcctggagaaaaaggagacaggggagatccagggccagttggcatatctagtccaagacctccaatgctaaacctttggttcaaaggagaaaaaggatctcaaggttctgctggatcagatggatttcctgggcccagaggtgacaaaggagagcctggcatcccagggttaccaggtgcacctggagctcctggacagtccaataccatcaaaggactcagtgggagtccaggttcccctggatctatgggaagaaggggattacctggcctgaaggggtctctggggattgcaggtttcccaggaataccaggaaaaagtggttcacagggcctcactgggactcctggccccctgggagcaactggtatcccaggtttaaaaggagatcaaggcccaacacttggcatttctggaagcccaggacccaagggacagcctggcgaattaggttttaaaggtgtcaaaggaaaagatggactagtcggtgatagaggttacccaggaaacaaaggtgacagtggaaaagttggtagtgctggagatcctggcttccctggctccccaggacttaaagggatttcaggtatgaatggagacccaggcttcccaggttcctctggccatgtgggatcgatcggccgccctggaccctctggcttaataggacctaaaggattccctggacttcctggtttacatggactgaatggacttccaggcaccaagggtactcacggcactccaggagccagtatcactggtgttcctgggccagctggcctgcctggtcccaaaggggaaaagggaatgccaggaattgtcatcggagatccagggaaacaaggcttaaggggacaaaaaggtgaccaaggttccccgggtcttcaaggtcctgctggtactcctggagcctcaggcatctccttgccctcagtcatagcaggacagcctggtgaccctgggcagccaggcctagatggagaacgaggccgcccaggtctcccaggccctccaggtccccctggaccatcctcagatcaaggcgatcctggagactctggcttccctggaattccaggccttcaagggctcaagggaaaccagggacttccgggtttctctgggctctctggagatctagggctaaaaggcatgagaggggaacctggcctcatggggactcctggcaagattgggccaccaggagacccaggatttcctggaatgaaggggaaggcggggccaagaggcttttctggcccccagggtgctccaggacacacaccaattgctgaagctcggcacgttcctccaggacctttgggtctgccaggcattgatggcatcccaggcctcacaggagaccctggatctcaaggctctgtgggtctgcaaggttccaaaggcctacctggcatccctggcaaggatggccctagtgggcttccaggcccatctggaatccttggtgatcctggtctccctggactacaaggacctccaggatttgaaggagctccaggaaatcagggccccattgggcagcctgggatgcctggacacagtgtgagagtgggctacacattagtaaaacacagtcagtcagaacacgtgccaccatgccccattggcatgagccagctatgggtgggttacagcttgctgttcgtggaagggcaggagaaagcccataaccaggatctgggatttgctggctcctgcctgccccgattcagcaccatgcccttcatctactgcaacatcaatgaagtgtgccactatgccagacgcaatgataaatcctactggctctccactactgcccctattcccatgatgcctgtgggcgagacccagattccccagtatatcagtcgctgttctgtatgtgaggcaccctcacaagccattgctgtgcacagccaggatatcaccgttccacagtgccctttgggctggcacagcctctggattggatactccttcctcatgcacactgctgctgggactgagggtggaggccaatccctagtctcccctggctcctgtcttgaggacttccgggccaatcctttcatcgagtgcagcggtgcccgtggtacctgccactactttgccaacaagtacagtttctggctgacaacagtggaggagagagggcagtttcaggaacagcctgtgtccgagaatctgaaaactgggcagcttcacaccagggtgagccgctgccaggtgtgtatgaaaaccccgtagggcattgcctgtcatgcagtcatgcagcccctgatctccctacccacctcacaacactcacctcaacaagtctgaaccgtcggagaaaggaagacctaagcccatctgcccgtcaagttgtacatcaaagcctcatttggactggactactggacattggtcatcccaaccctcaggcccaacagatgagcccactgtgctaggattcgatttgctctcctgtttccatccatctggtgctaatgttccattgtgtgtgattattcatggctacctcagaaaggtgtgctaaaccgccattttctaagactgctagagctgtcctcactgccaataaccaggaaactctgtaacagctaagttatttatgacaagacatcaccacatattatttgagtcaaactacaactcagaatttctaccctaaaagtatgtttctggctgaacattatagacagttcaagtctgcctagggctagccctccctactgaaggcagcctattatagttagacaggcagcagtatcagaatgaggagacagcctatagccagaactgagctgtgagtccttccagagttttgttaggttcatgccccatcttcactaggaaaggctgaaaggtcctggataaatcactgccccctggtccacatccagagagatagacaagatggcccagtgcaaacaaagaatacagaaaatgtgaccaagcttacagaaggaaatgagaatcacttctctttcttcttggcctagggcagagtgatgaataaacatagaagttgcagttcctgaatccaggaacaaaaatgtaaatctcatgtccccattcctcagaaatccctagttattccaaatgccacccagttgtgtgcagggtgacgaactgaagctacaatatgttggctccctgcattctgaggctactacagaagttctgataaaatggccattcaactaatctcccacaggtagctttttaaactagttgacagctttttttaaatttcataaaaatctagcacacaccactgttagcagacctgaggcacagtctgagttggccatgaagtattgccttctgtttgaaacaattcattttaattaccagttgtgtagaacacagtcagttacagtgatgtgaagcactcccttccaggtccttcacttccttgagtattatgtaaagtgtgccactgcaggcaaagcatacccagtatattctgagctgttgtcgccacctcctagacaagtaacaaatggtacatagcaaataaaattaatgaaatgcgaa
//
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@meso_cacase at
DBCLS
This page is licensed under a
Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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