2024-03-28 19:02:00, GGRNA.v2 : RefSeq release 222 (Jan, 2024)
LOCUS NM_001009645 2098 bp mRNA linear ROD 20-MAR-2023 DEFINITION Rattus norvegicus kinesin family member 22 (Kif22), mRNA. ACCESSION NM_001009645 XM_215074 VERSION NM_001009645.1 KEYWORDS RefSeq; RefSeq Select. SOURCE Rattus norvegicus (Norway rat) ORGANISM Rattus norvegicus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus. REFERENCE 1 (bases 1 to 2098) AUTHORS Iemura K and Tanaka K. TITLE Chromokinesin Kid and kinetochore kinesin CENP-E differentially support chromosome congression without end-on attachment to microtubules JOURNAL Nat Commun 6, 6447 (2015) PUBMED 25743205 REMARK Publication Status: Online-Only REFERENCE 2 (bases 1 to 2098) AUTHORS Santamaria A, Nagel S, Sillje HHW and Nigg EA. TITLE The spindle protein CHICA mediates localization of the chromokinesin Kid to the mitotic spindle JOURNAL Curr Biol 18 (10), 723-729 (2008) PUBMED 18485706 REFERENCE 3 (bases 1 to 2098) AUTHORS Zhu C, Zhao J, Bibikova M, Leverson JD, Bossy-Wetzel E, Fan JB, Abraham RT and Jiang W. TITLE Functional analysis of human microtubule-based motor proteins, the kinesins and dyneins, in mitosis/cytokinesis using RNA interference JOURNAL Mol Biol Cell 16 (7), 3187-3199 (2005) PUBMED 15843429 REFERENCE 4 (bases 1 to 2098) AUTHORS Dickins RA, Frew IJ, House CM, O'Bryan MK, Holloway AJ, Haviv I, Traficante N, de Kretser DM and Bowtell DD. TITLE The ubiquitin ligase component Siah1a is required for completion of meiosis I in male mice JOURNAL Mol Cell Biol 22 (7), 2294-2303 (2002) PUBMED 11884614 COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC088421.1. On Jan 13, 2005 this sequence version replaced XM_215074.2. ##Evidence-Data-START## Transcript exon combination :: BC088421.1, SRR8487231.29610.1 [ECO:0000332] RNAseq introns :: mixed/partial sample support SAMD00132261, SAMD00132262 [ECO:0000350] ##Evidence-Data-END## ##RefSeq-Attributes-START## RefSeq Select criteria :: based on single protein-coding transcript ##RefSeq-Attributes-END## FEATURES Location/Qualifiers source 1..2098 /organism="Rattus norvegicus" /mol_type="mRNA" /db_xref="taxon:10116" /chromosome="1" /map="1q37" gene 1..2098 /gene="Kif22" /note="kinesin family member 22" /db_xref="GeneID:293502" /db_xref="RGD:1311886" exon 1..78 /gene="Kif22" /inference="alignment:Splign:2.1.0" CDS 21..1994 /gene="Kif22" /note="kinesin-like protein KIF22-like" /codon_start=1 /product="kinesin-like protein KIF22" /protein_id="NP_001009645.1" /db_xref="GeneID:293502" /db_xref="RGD:1311886" /translation="
MNVRAKKKPQQREMASASSGPSRSLSKGGVSRRPPLARVRVAVRLRPFMDEAKEPPCVRGIDSCSLEVANWRKYQETLKYQFDAFYGEKSTQQDVYVGSVQPILRHLLEGQNASVLAYGPTGAGKTHTMLGSPEQPGVIPRALMDLLQLTREESAEGRPWDISVAMSYLEIYQEKVLDLLDPASGDLVIREDCRGNILIPGLTQKPITSFSEFEQHFLPASRNRVVGATRLNQRSSRSHAVLLVKVEQRERLTPFRQREGKLYLIDLAGSEDNRRTGNQGIRLKESGAINTSLFVLGKVVDALNQGLPRIPYRDSKLTRLLQDSLGGSAHSILIANIAPERRFYQDTISALNFTARSKEVINRPFTNESLQPHALAPVKLPQKELLGPSEAKKAKGPEEESTGSPESTAAPASASQKLSLLQKLSNMDPAMLENLLSMERLLGSQGSQGIPLLNTPKRERMVLIKTVEEKNLEIERLKMKQKELEAKVLAQEALDPKEKENTPTILQPSSSCSGSVAKPLKKAVVMPLQRIQKQSESSNKIHLLKKGHKRKLESSHESEAVEKDEDYWEIQISPELLARGRKKLLHLLNEGSARDLRSLQRIGQKKAQLIVGWRELHGPFNEVEDLEQVEGISGKQVESFLKANLLSLAASQHSGPS"
misc_feature 21..119 /gene="Kif22" /note="propagated from UniProtKB/Swiss-Prot (Q5I0E8.1); Region: Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite" misc_feature 132..1094 /gene="Kif22" /note="Kinesin motor domain, KIF22/Kid-like subgroup; Region: KISc_KID_like; cd01376" /db_xref="CDD:276827" misc_feature order(156..158,375..377,384..386,390..401,816..818) /gene="Kif22" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:276827" misc_feature order(957..959,966..968,975..977) /gene="Kif22" /note="microtubule interaction site [polypeptide binding]; other site" /db_xref="CDD:276827" misc_feature 1182..1265 /gene="Kif22" /note="propagated from UniProtKB/Swiss-Prot (Q5I0E8.1); Region: Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite" misc_feature 1230..1232 /gene="Kif22" /note="Phosphoserine. /evidence=ECO:0000250|UniProtKB:Q14807; propagated from UniProtKB/Swiss-Prot (Q5I0E8.1); phosphorylation site" misc_feature 1275..1277 /gene="Kif22" /note="Phosphoserine. /evidence=ECO:0000250|UniProtKB:Q14807; propagated from UniProtKB/Swiss-Prot (Q5I0E8.1); phosphorylation site" misc_feature 1350..1352 /gene="Kif22" /note="Phosphoserine. /evidence=ECO:0000250|UniProtKB:Q14807; propagated from UniProtKB/Swiss-Prot (Q5I0E8.1); phosphorylation site" misc_feature 1629..1631 /gene="Kif22" /note="Phosphoserine. /evidence=ECO:0000250|UniProtKB:Q14807; propagated from UniProtKB/Swiss-Prot (Q5I0E8.1); phosphorylation site" misc_feature 1680..1682 /gene="Kif22" /note="Phosphoserine. /evidence=ECO:0000250|UniProtKB:Q14807; propagated from UniProtKB/Swiss-Prot (Q5I0E8.1); phosphorylation site" misc_feature 1737..1739 /gene="Kif22" /note="Phosphoserine. /evidence=ECO:0000250|UniProtKB:Q14807; propagated from UniProtKB/Swiss-Prot (Q5I0E8.1); phosphorylation site" misc_feature <1782..1934 /gene="Kif22" /note="DNA uptake protein ComE and related DNA-binding proteins [Replication, recombination and repair]; Region: ComEA; COG1555" /db_xref="CDD:224472" exon 79..262 /gene="Kif22" /inference="alignment:Splign:2.1.0" exon 263..390 /gene="Kif22" /inference="alignment:Splign:2.1.0" exon 391..545 /gene="Kif22" /inference="alignment:Splign:2.1.0" exon 546..755 /gene="Kif22" /inference="alignment:Splign:2.1.0" exon 756..986 /gene="Kif22" /inference="alignment:Splign:2.1.0" exon 987..1140 /gene="Kif22" /inference="alignment:Splign:2.1.0" exon 1141..1276 /gene="Kif22" /inference="alignment:Splign:2.1.0" exon 1277..1445 /gene="Kif22" /inference="alignment:Splign:2.1.0" exon 1446..1611 /gene="Kif22" /inference="alignment:Splign:2.1.0" exon 1612..1673 /gene="Kif22" /inference="alignment:Splign:2.1.0" exon 1674..1886 /gene="Kif22" /inference="alignment:Splign:2.1.0" exon 1887..1946 /gene="Kif22" /inference="alignment:Splign:2.1.0" exon 1947..2073 /gene="Kif22" /inference="alignment:Splign:2.1.0" ORIGIN
ggtccgaagaagggagggatatgaacgttagggctaagaaaaagccgcagcaacgggagatggcgtcggccagctcaggacccagtcgctctctaagcaagggaggagtcagcagacgtcctcctctagctcgagtaagggtggccgtgcgactgcgcccatttatggatgaagcaaaggaaccaccctgtgtgcgaggcatagacagctgctctcttgaagtagccaactggaggaaataccaggagactctaaaatatcagtttgatgctttctatggagagaagagcactcagcaagatgtctatgtgggttcagtacagcccattctcaggcacttgctggaagggcagaatgccagtgtacttgcctatgggcctactggggcagggaagacacacacaatgctgggtagcccagaacagcctggagtgattcctcgggctctcatggacctcctgcaactaacaagggaagagagtgctgagggccggccctgggacatttctgttgctatgtcctatttggagatctaccaggaaaaggtattagacctcttggatcctgcatcaggagacctagtgatccgagaggactgtcgagggaacatcctgattccaggcctcactcagaagcccatcactagcttctctgagttcgagcagcacttccttccagccagtagaaatcgagtcgtaggagctacccggcttaaccagcgctcttcccgcagtcatgcggtgctcttggtcaaggtagaacagcgtgaacgtttgactccatttcgccagcgggaaggaaaactctaccttattgatttggctggttcagaggacaaccgtcgcacaggcaaccagggaattcggctaaaagagagtggagccatcaacacctccctctttgtattgggcaaagtggtggatgcattaaaccagggcctccctcgtataccataccgggacagcaagctcactcgtctgctgcaggactctctgggaggttcagctcatagcatcctcattgccaacatcgctcctgaaaggcgtttttaccaggatacgatctcagcattgaacttcactgcgaggtccaaggaggtgattaaccggcctttcaccaatgagagcctacagcctcatgccttggcacctgttaagctgcctcagaaagaactgctaggcccatcagaggcaaagaaagccaaaggccctgaagaagaatcaactgggagccctgagtctacagcagctccagcatctgcctcccagaaattaagcctcttacagaagctaagcaatatggatccagccatgttggagaacctcctgagtatggaacgtttgctgggttcccaggggagccaagggatacctctactgaataccccaaagcgagagcgaatggtactcattaagacagtggaggaaaagaacttagagattgagaggcttaagatgaagcaaaaagaactggaagccaaggtgctggcccaggaggcactggatccaaaggaaaaagagaacactcccacaattctccagccctcttcctcctgtagtggctcagtggctaagcccctgaaaaaggctgtggtgatgcccctgcaacggattcagaagcagtcagagtcctcaaacaagatccacctcctgaagaaaggccacaaaaggaagctggagtcatcacatgagtcagaagctgtggaaaaggatgaggactactgggagatacaaattagcccagagttactggcacgggggcgcaaaaaattattgcatctgctgaatgaaggctcagctcgggatctgcgaagcctgcagcgaattggccagaagaaggcccagctcattgtgggctggagggagctgcatggcccctttaatgaggtggaggacctggaacaggtggaaggcatctctgggaagcaggtagagtctttcctgaaggcgaatctcttgagcttggctgccagccagcacagtggtccctcttgactaccagctcttgacactacctttttcttttaaaaattcttgtatagtgatgttgtgtaaatacagcttttattccgtgaaaaaaaaaaaaaaaaaaaaaaaaa
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Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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