LOCUS       XM_011250827            2444 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus retinaldehyde binding protein 1 (Rlbp1),
            transcript variant X5, mRNA.
ACCESSION   XM_011250827
VERSION     XM_011250827.2
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000073.7) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Sep 21, 2020 this sequence version replaced XM_011250827.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2444
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="7"
     gene            1..2444
                     /gene="Rlbp1"
                     /gene_synonym="3110056M11Rik; CRALBP"
                     /note="retinaldehyde binding protein 1; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 14 ESTs, 482 long SRA reads, and 100% coverage of the
                     annotated genomic feature by RNAseq alignments, including
                     18 samples with support for all annotated introns"
                     /db_xref="GeneID:19771"
                     /db_xref="MGI:MGI:97930"
     CDS             841..1749
                     /gene="Rlbp1"
                     /gene_synonym="3110056M11Rik; CRALBP"
                     /codon_start=1
                     /product="retinaldehyde-binding protein 1 isoform X2"
                     /protein_id="XP_011249129.1"
                     /db_xref="GeneID:19771"
                     /db_xref="MGI:MGI:97930"
                     /translation="

MSDGVGTFRMVPEEEQELRAQLEQLTTKDHGPVFGPCSQLPRHTLQKAKDELNEKEETREEAVRELQELVQAQAASGEELALAVAERVQARDSAFLLRFIRARKFDVGRAYELLKGYVNFRLQYPELFDSLSMEALRCTIEAGYPGVLSSRDKYGRVVMLFNIENWHCEEVTFDEILQAYCFILEKLLENEETQINGFCIVENFKGFTMQQAAGLRPSDLKKMVDMLQPWYFTTTYNVVKPFLKNKLLQRVFVHGDDLDGFFQEIDENILPADFGGTLPKYDGKVVAEQLFGPRAEVENTAL"

     misc_feature    1018..1191
                     /gene="Rlbp1"
                     /gene_synonym="3110056M11Rik; CRALBP"
                     /note="CRAL/TRIO, N-terminal domain; Region: CRAL_TRIO_N;
                     smart01100"
                     /db_xref="CDD:215024"
     misc_feature    1261..1671
                     /gene="Rlbp1"
                     /gene_synonym="3110056M11Rik; CRALBP"
                     /note="Sec14p-like lipid-binding domain; Region: SEC14;
                     cd00170"
                     /db_xref="CDD:469559"
ORIGIN      

cagctggctctctagtcatcccagttctcagaggggactgagtcatgtcgtggtgacataaccacactgaaaaaagtgcagtagcaaggacagaaagtcggacaagggagatctgctgaggccccacacccatcccctgcttccttgcctttgcgaggcagagatcggcagagatcggagggtcagggtacctagcaagtcctccgctgctcagcctcgcccgctccatttccctctgccacatgggacagtggaccataggcctgggttgcagcaatgatcacatttataatttctcttcacttctctatatgtcctgccctttgtgaagaaggagtagtctcccaggcccccctgcctcccagtttgagaagcgagatggcagggaaatgagacggggctggcccagatcccagtgaagtggcttccacatggctgaacagagagctccaagcaggagctcacaaagcagggctttgatggtagccccgcaggccgggcctctcccctctccctcagggtgcttcacttgcttcattctgggcctcctgtgagcctgactgaatgggaaacggtgggcctgagaagttccttgtgacacactaatcccagcttgctgacctgaccacacccccaaagaaagcagcctcccgagctccagaacaattcaggcatccagtagccccaagaaagagctgtcagggacggtcaagactcggatgaaatcacacaacttgcaagtgtgagagacagcattgcaatccaggccccacaccctgctgccccaagctgcttcttggtgtctacagaagtcacaacttagtgtcttcaagaggcagtatgtcagacggggtgggcactttccgcatggttcctgaagaggagcaggagctccgagcacaactggagcagctcacaaccaaggatcatggtcctgtctttggcccatgcagccagctgccccgccacactttgcagaaggccaaggatgagctgaatgaaaaggaggagacccgggaggaagcggtgagggagctacaggagctggtacaggcacaggcagcttctggcgaggaattggccctggcagtggctgagagggtgcaggcaagagacagcgccttcctcctgcgcttcatccgtgcccgcaagttcgatgtgggtcgtgcttatgagctgctcaaaggctatgtgaacttccgcctccagtaccctgaactcttcgatagtctctccatggaggctctccgctgcactatcgaggccggataccctggtgtcctttccagtcgggacaagtatggtcgagtggttatgctcttcaacatcgaaaactggcactgtgaagaagtgacctttgatgagatcttacaggcatattgtttcattttggagaaactgctggaaaatgaggaaacccaaatcaacggcttctgtattgttgagaacttcaagggcttcaccatgcagcaggcagcagggctccgcccctcggatctcaagaagatggtggacatgctccagccatggtacttcaccaccacctataatgtggtcaagcccttcttgaagaacaagctgctacagagggtctttgttcacggagatgacctggatggcttcttccaggagattgatgagaacatcctgcctgctgactttgggggtacactgcccaagtacgacggcaaagttgttgctgagcagctctttggtccccgggctgaagttgagaacacagccttatgaggagatgccctgccatgggatccgtattagcatcccagtccttcttcagctttcctgaacccaagtccggggacaggaatgcctgaagggactgttttcccagacttccctaggtttaggaacgctctagtggcacctcatcccaaaccgacctagagggcagtgaggcaggggaatgcctttcatcgggagatatgtggggcagttaaattcccacctgcctctgcagttacagggcagtgactctgagagaagttggatttcaaagactaattaggcttctccgtgatttcctttgtaatcgctttgatacttagggcgtggaaggcagagttaaaggcatacttgcaattcagtaaaaagaagaaagagaggggcttgaagctctgatgatcttaacagcagtaggcagataaggggtttcccacccaggattccagggaggggccagcaaccttagcacagttgctgatgaatactctagtagctaagagctctggactctgtccagggtggaggtcatgtcccttcctctccacccatcttggatgtgatccttggtgctggggcccccattcactagatgctgtaggctttgttgtatggttttacttaaatgtacctttgacatcttccccgaacactctcagttcttattaggcaaataaaaccgttctttgtcttgtgtcacactc

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