2024-09-28 11:18:27, GGRNA.v2 : RefSeq release 225 (Jul, 2024)
LOCUS NR_164362 729 bp RNA linear ROD 07-AUG-2023 DEFINITION Mus musculus reproductive homeobox 11, pseudogene 2 (Rhox11-ps2), long non-coding RNA. ACCESSION NR_164362 XM_006541566 XM_006544918 VERSION NR_164362.1 KEYWORDS RefSeq. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. COMMENT VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AL590629.16. On or before Sep 13, 2019 this sequence version replaced XM_006544918.2, XM_006541566.2. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments. ##Evidence-Data-START## Transcript exon combination :: SRR5189682.145759.1, SRR5189685.103948.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN00849384 [ECO:0000348] ##Evidence-Data-END## PRIMARY REFSEQ_SPAN PRIMARY_IDENTIFIER PRIMARY_SPAN COMP 1-427 AL590629.16 130574-131000 c 428-473 AL590629.16 127856-127901 c 474-729 AL590629.16 125932-126187 c FEATURES Location/Qualifiers source 1..729 /organism="Mus musculus" /mol_type="transcribed RNA" /strain="C57BL/6" /db_xref="taxon:10090" /chromosome="X" /map="X 22.19 cM" gene 1..729 /gene="Rhox11-ps2" /gene_synonym="Gm14544; Rhox11-ps" /note="reproductive homeobox 11, pseudogene 2" /db_xref="GeneID:102637882" /db_xref="MGI:MGI:3705790" ncRNA 1..729 /ncRNA_class="lncRNA" /gene="Rhox11-ps2" /gene_synonym="Gm14544; Rhox11-ps" /product="reproductive homeobox 11, pseudogene 2" /db_xref="GeneID:102637882" /db_xref="MGI:MGI:3705790" exon 1..427 /gene="Rhox11-ps2" /gene_synonym="Gm14544; Rhox11-ps" /inference="alignment:Splign:2.1.0" exon 428..473 /gene="Rhox11-ps2" /gene_synonym="Gm14544; Rhox11-ps" /inference="alignment:Splign:2.1.0" exon 474..729 /gene="Rhox11-ps2" /gene_synonym="Gm14544; Rhox11-ps" /inference="alignment:Splign:2.1.0" ORIGIN
acactcggagactcaaagcctcctgaactccagggtccagtgacttcggcagagctccacccatggcatataagaaatactacttcgatgttgacaagtacggtgtggacttttatgaagaagaagtagcatctgaaatccagcaacggaggttagcaacaacagatgatagccacactgaagaagttgtaggaatcctgaagggactgagctacataaacgctgtgttggaccacaactacaaccgtccaatgaagagcgacacctgtaggaaaccccttgagcctgcacaagaagaggaggaggaggagcctgtttttcgaaagccaaccaagtattgccgaaagcagtacaagttcactcctgaacaactacttgaactagacagaatttttgaagaaactcaatgccccgatacactccaaaggaaagagattgcaaagctcatgaatgtagaggaatgcactgtgaagatttggttctgcaatcaaagagccaaacttaggaaaaatcagaaggcagcaccgtgcaacaaagccctacctaataaacagagctgctttccccgaaaggttttgaaagaaaccaagaacgttgttgttcttcaggagccgcttgcggatgagtttttctgctgtcggccacatgttagccacccaaattggcggtgacaacactatcactttatgtaaattagcaataaagaggagaaatctctttttgcttcaa
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This page is licensed under a
Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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