2025-09-19 08:26:14, GGRNA.v2 : RefSeq release 231 (Jul, 2025)
LOCUS NM_207248 2427 bp mRNA linear ROD 06-FEB-2025 DEFINITION Mus musculus RIKEN cDNA 4930433I11 gene (4930433I11Rik), mRNA. ACCESSION NM_207248 XM_145538 VERSION NM_207248.4 KEYWORDS RefSeq; RefSeq Select. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 2427) AUTHORS Diez-Roux,G., Banfi,S., Sultan,M., Geffers,L., Anand,S., Rozado,D., Magen,A., Canidio,E., Pagani,M., Peluso,I., Lin-Marq,N., Koch,M., Bilio,M., Cantiello,I., Verde,R., De Masi,C., Bianchi,S.A., Cicchini,J., Perroud,E., Mehmeti,S., Dagand,E., Schrinner,S., Nurnberger,A., Schmidt,K., Metz,K., Zwingmann,C., Brieske,N., Springer,C., Hernandez,A.M., Herzog,S., Grabbe,F., Sieverding,C., Fischer,B., Schrader,K., Brockmeyer,M., Dettmer,S., Helbig,C., Alunni,V., Battaini,M.A., Mura,C., Henrichsen,C.N., Garcia-Lopez,R., Echevarria,D., Puelles,E., Garcia-Calero,E., Kruse,S., Uhr,M., Kauck,C., Feng,G., Milyaev,N., Ong,C.K., Kumar,L., Lam,M., Semple,C.A., Gyenesei,A., Mundlos,S., Radelof,U., Lehrach,H., Sarmientos,P., Reymond,A., Davidson,D.R., Dolle,P., Antonarakis,S.E., Yaspo,M.L., Martinez,S., Baldock,R.A., Eichele,G. and Ballabio,A. TITLE A high-resolution anatomical atlas of the transcriptome in the mouse embryo JOURNAL PLoS Biol 9 (1), e1000582 (2011) PUBMED 21267068 REMARK Publication Status: Online-Only COMMENT VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AC108435.5. On Feb 6, 2025 this sequence version replaced NM_207248.3. ##Evidence-Data-START## Transcript exon combination :: AK029662.1, BC150921.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN00849384 [ECO:0000348] ##Evidence-Data-END## ##RefSeq-Attributes-START## RefSeq Select criteria :: based on single protein-coding transcript ##RefSeq-Attributes-END## PRIMARY REFSEQ_SPAN PRIMARY_IDENTIFIER PRIMARY_SPAN COMP 1-160 AC108435.5 73053-73212 c 161-2427 AC108435.5 65583-67849 c FEATURES Location/Qualifiers source 1..2427 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6" /db_xref="taxon:10090" /chromosome="7" /map="7 27.95 cM" gene 1..2427 /gene="4930433I11Rik" /gene_synonym="Gm481" /note="RIKEN cDNA 4930433I11 gene" /db_xref="GeneID:243944" /db_xref="MGI:MGI:2685327" exon 1..160 /gene="4930433I11Rik" /gene_synonym="Gm481" /inference="alignment:Splign:2.1.0" misc_feature 112..114 /gene="4930433I11Rik" /gene_synonym="Gm481" /note="upstream in-frame stop codon" CDS 154..2052 /gene="4930433I11Rik" /gene_synonym="Gm481" /codon_start=1 /product="uncharacterized protein LOC243944" /protein_id="NP_997131.2" /db_xref="CCDS:CCDS52207.1" /db_xref="GeneID:243944" /db_xref="MGI:MGI:2685327" /translation="
MSVVEMDTSLGLSPSSQTLCLLQSPEFYITCTPVSQRKTPSVDGDGPLTTSIPSHSEFLALPPAPSAEQTEIKNMHEMEVEHLMPRDAYKGTKENQDPSFLPLSHPDLQQPLHCIDTGNLRQTSASDNDSLGGIHLGLEEKGTLDSLKVSTIDFPDITTLVADIHLPQLFKFLTGLDQYQDSTVTESKDSTVVWRDQAQENSRVISGSSDQVKKKDHDTSELIDGAPHAKIPNWDLVVGEGSMASVGVSGRAIDNMAKDLEGKAPKVSPIMPSRARGQGQDKTKWTTENNSKKIEELKKSRNRAKAEKKPTIPKTKIKRDLPELSHSSFKKPRTHLGMHMLESVQVFHPLGKKSEKKPATTSSQHLGTSSSNKYPGPGPATTVLQDMAHECQGPDETPGKVQRAESSALKECPSQSQYEVPPAGKVRLVPLPFPTQDQPQTRPVSRKPLNLASHRPTTAYSERCHFHSAQLTTLKPSQPPSISKSLMASAKPALPISSSAMRSNVTNIIHISTVPQSGTLRPTSYREPSQTSLQRELLSAAKNNVPAPLEPQTQYLLQDFSRQPIPWRKVDILGPVVSQPITKEQRPEREAMKRRAQQERENAAKYTSPGKLQLFLQREKDMEISRYYGYAM"
misc_feature 775..1215 /gene="4930433I11Rik" /gene_synonym="Gm481" /note="Domain of unknown function (DUF4629); Region: DUF4629; pfam15442" /db_xref="CDD:434721" exon 161..2427 /gene="4930433I11Rik" /gene_synonym="Gm481" /inference="alignment:Splign:2.1.0" regulatory 2087..2092 /regulatory_class="polyA_signal_sequence" /gene="4930433I11Rik" /gene_synonym="Gm481" /note="hexamer: AATATA" polyA_site 2110 /gene="4930433I11Rik" /gene_synonym="Gm481" /note="major polyA site" regulatory 2372..2377 /regulatory_class="polyA_signal_sequence" /gene="4930433I11Rik" /gene_synonym="Gm481" /note="hexamer: ATTAAA" polyA_site 2391 /gene="4930433I11Rik" /gene_synonym="Gm481" /note="major polyA site" regulatory 2403..2408 /regulatory_class="polyA_signal_sequence" /gene="4930433I11Rik" /gene_synonym="Gm481" /note="hexamer: AATAAA" polyA_site 2427 /gene="4930433I11Rik" /gene_synonym="Gm481" ORIGIN
gtaaacaactggatcacaggcaacctatgaccagtgaacactgtctgctagtggacagaggggccagtttggtgagatcagtcaaggacaaccatttattctgctccattgtaacgtggattactgctattccctcccaccattgccttgacaatgtcagtggtggaaatggatacatccctgggattgtcaccttcaagccaaacactttgtctgctgcagagtccagaattctacatcacttgcaccccggtttcccagaggaagacaccatctgttgatggggacgggccattaacaacctctatccctagccattcagaattcctcgccttgcctccagctccaagtgctgaacaaacagagattaaaaacatgcatgagatggaagttgagcacttgatgcctcgggatgcctataagggtactaaagaaaaccaagacccatcattccttcctttatcacaccctgacttgcagcagcctctgcactgcattgacactggaaacctaagacagacgtctgcttctgacaatgacagcttggggggcatccacctgggtctggaagagaaaggaacactggacagtttgaaggtgtccactattgactttccagatatcactacattggtggcagatattcaccttcctcaactcttcaaattcctcacaggcctagatcaataccaagattcaacagtaactgaatctaaagactccacagttgtctggagggatcaggcccaagaaaactccagagtcatcagtgggtcctctgaccaggtgaaaaagaaagaccatgacacctctgagttgattgatggagctcctcatgccaaaatcccaaactgggatctggtggtgggagaagggtctatggccagtgttggggtcagtggcagggctattgacaacatggctaaggacttggaggggaaagctcccaaagtgtcacccatcatgcccagcagagctaggggacaagggcaagacaagaccaaatggaccacagaaaataattccaagaaaatagaggagctcaagaagtcaaggaacagagccaaagctgaaaagaagcccaccatccccaagaccaagataaagagggatctacctgagcttagccacagcagctttaaaaagcctagaacccaccttggcatgcacatgctggagtctgtgcaggtcttccatcctctggggaagaagagtgagaagaaacctgctaccacttcttcccagcatctgggaacttctagcagcaacaaatatcccgggccaggcccagccacaacagtactacaggatatggctcatgagtgccagggccctgacgaaactccaggcaaggttcagagagcagagagcagtgctctcaaggagtgtccatctcagtctcagtatgaggtgcccccagctgggaaggtcaggttagtacctctgcctttcccaacccaggaccagcctcaaaccagacctgtttctagaaagcccctcaatctggcttcacacaggcccactacagcttactctgagaggtgtcattttcactcagctcagcttaccacactcaagccatcccaaccaccttctatcagcaaatctttgatggcttctgccaagccagctctgccaatttcttccagtgccatgcgatctaatgtaaccaacatcatccacattagcactgtgcctcaatcaggcaccttgaggcctacatcctatagagagccatctcagacttccctccagagggagcttctttctgctgccaagaacaacgtgccagcacctcttgaacctcaaactcaatatctgttgcaagacttcagccgccaacccattccatggagaaaagttgacattctgggaccagttgtctcacagcccatcacaaaagagcagaggccagagagggaggccatgaagaggagggcccaacaggagcgagagaatgctgccaagtacacctctcctgggaaactgcagctttttctccagagggagaaagatatggaaatttcccgatactatggctatgcaatgtaagagctgcccagatatttcagtgtggacaaggataaatatagacactgatacatacgtatacatgagtattatatgaatgtgtagtagtcatatgggcacacctgtgttatgtaagtgtttgtttatagaaattgacagacaaattttatttcatacttgtaaatatttgactggagaaatttaagtcaatcctttaattcatggtatacagaggatttgtttttattctcatgactttgatttttaaaaatctaggttgctcaagtgatatatgttacataaatgtatcatatgatagaaaactctgataatatttaatattaaagcaattcatcaatagctgtagtgttaataaatttattctccttgagctta
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Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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