2025-03-13 01:02:18, GGRNA.v2 : RefSeq release 228 (Jan, 2025)
LOCUS NM_009757 3116 bp mRNA linear ROD 10-DEC-2024 DEFINITION Mus musculus bone morphogenetic protein 15 (Bmp15), mRNA. ACCESSION NM_009757 VERSION NM_009757.5 KEYWORDS RefSeq; RefSeq Select. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 3116) AUTHORS Liu,Y., Fan,H., Kang,X., Hao,Y., Wang,N., Zheng,H., Li,Y. and Kang,S. TITLE A rare germline BMP15 missense mutation causes hereditary ovarian immature teratoma in human JOURNAL Proc Natl Acad Sci U S A 121 (10), e2310409121 (2024) PUBMED 38427603 REFERENCE 2 (bases 1 to 3116) AUTHORS Ito,H., Emori,C., Kobayashi,M., Maruyama,N., Fujii,W., Naito,K. and Sugiura,K. TITLE Cooperative effects of oocytes and estrogen on the forkhead box L2 expression in mural granulosa cells in mice JOURNAL Sci Rep 12 (1), 20158 (2022) PUBMED 36424497 REMARK Publication Status: Online-Only REFERENCE 3 (bases 1 to 3116) AUTHORS Gindi,N., Grossman,H., Bar-Joseph,H., Miller,I., Nemerovsky,L., Hadas,R., Nevo,N., Galiani,D., Dekel,N. and Shalgi,R. TITLE Fyn and argonaute 2 participate in maternal-mRNA degradation during mouse oocyte maturation JOURNAL Cell Cycle 21 (8), 792-804 (2022) PUBMED 35104175 REFERENCE 4 (bases 1 to 3116) AUTHORS Tanaka,K., Hayashi,Y., Takehara,A., Ito-Matsuoka,Y., Tachibana,M., Yaegashi,N. and Matsui,Y. TITLE Abnormal early folliculogenesis due to impeded pyruvate metabolism in mouse oocytesdagger JOURNAL Biol Reprod 105 (1), 64-75 (2021) PUBMED 33824958 REMARK GeneRIF: Abnormal early folliculogenesis due to impeded pyruvate metabolism in mouse oocytesdagger. Erratum:[Biol Reprod. 2021 Oct 11;105(4):1069. doi: 10.1093/biolre/ioab154. PMID: 34390336] REFERENCE 5 (bases 1 to 3116) AUTHORS Ge,W., Tan,S.J., Wang,S.H., Li,L., Sun,X.F., Shen,W. and Wang,X. TITLE Single-cell Transcriptome Profiling reveals Dermal and Epithelial cell fate decisions during Embryonic Hair Follicle Development JOURNAL Theranostics 10 (17), 7581-7598 (2020) PUBMED 32685006 REMARK Publication Status: Online-Only REFERENCE 6 (bases 1 to 3116) AUTHORS Yan,C., Wang,P., DeMayo,J., DeMayo,F.J., Elvin,J.A., Carino,C., Prasad,S.V., Skinner,S.S., Dunbar,B.S., Dube,J.L., Celeste,A.J. and Matzuk,M.M. TITLE Synergistic roles of bone morphogenetic protein 15 and growth differentiation factor 9 in ovarian function JOURNAL Mol Endocrinol 15 (6), 854-866 (2001) PUBMED 11376106 REFERENCE 7 (bases 1 to 3116) AUTHORS Galloway,S.M., McNatty,K.P., Cambridge,L.M., Laitinen,M.P., Juengel,J.L., Jokiranta,T.S., McLaren,R.J., Luiro,K., Dodds,K.G., Montgomery,G.W., Beattie,A.E., Davis,G.H. and Ritvos,O. TITLE Mutations in an oocyte-derived growth factor gene (BMP15) cause increased ovulation rate and infertility in a dosage-sensitive manner JOURNAL Nat Genet 25 (3), 279-283 (2000) PUBMED 10888873 REFERENCE 8 (bases 1 to 3116) AUTHORS Jaatinen,R., Laitinen,M.P., Vuojolainen,K., Aaltonen,J., Louhio,H., Heikinheimo,K., Lehtonen,E. and Ritvos,O. TITLE Localization of growth differentiation factor-9 (GDF-9) mRNA and protein in rat ovaries and cDNA cloning of rat GDF-9 and its novel homolog GDF-9B JOURNAL Mol Cell Endocrinol 156 (1-2), 189-193 (1999) PUBMED 10612437 REFERENCE 9 (bases 1 to 3116) AUTHORS Dube,J.L., Wang,P., Elvin,J., Lyons,K.M., Celeste,A.J. and Matzuk,M.M. TITLE The bone morphogenetic protein 15 gene is X-linked and expressed in oocytes JOURNAL Mol Endocrinol 12 (12), 1809-1817 (1998) PUBMED 9849956 REFERENCE 10 (bases 1 to 3116) AUTHORS Laitinen,M., Vuojolainen,K., Jaatinen,R., Ketola,I., Aaltonen,J., Lehtonen,E., Heikinheimo,M. and Ritvos,O. TITLE A novel growth differentiation factor-9 (GDF-9) related factor is co-expressed with GDF-9 in mouse oocytes during folliculogenesis JOURNAL Mech Dev 78 (1-2), 135-140 (1998) PUBMED 9858711 COMMENT REVIEWED REFSEQ: This record has been curated by NCBI staff. The reference sequence was derived from AK135882.1, AK139773.1 and AU019682.1. On Aug 30, 2016 this sequence version replaced NM_009757.4. Summary: This gene encodes a secreted ligand of the TGF-beta (transforming growth factor-beta) superfamily of proteins. Ligands of this family bind various TGF-beta receptors leading to recruitment and activation of SMAD family transcription factors that regulate gene expression. The encoded preproprotein is proteolytically processed to generate subunits of a disulfide-linked homodimer, or alternatively, a heterodimer, with the related protein, growth differentiation factor 9 (GDF9). This protein plays a role in oocyte maturation and follicular development, through activation of granulosa cells. Female mice lacking a functional copy of this gene exhibit impaired fertility. [provided by RefSeq, Aug 2016]. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications. ##Evidence-Data-START## Transcript exon combination :: AK139847.1, BC055363.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN00849374, SAMN00849375 [ECO:0000348] ##Evidence-Data-END## ##RefSeq-Attributes-START## RefSeq Select criteria :: based on single protein-coding transcript ##RefSeq-Attributes-END## COMPLETENESS: complete on the 3' end. PRIMARY REFSEQ_SPAN PRIMARY_IDENTIFIER PRIMARY_SPAN COMP 1-1 AK135882.1 2-2 2-3035 AK139773.1 2-3035 3036-3116 AU019682.1 1-81 c FEATURES Location/Qualifiers source 1..3116 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6" /db_xref="taxon:10090" /chromosome="X" /map="X 2.81 cM" gene 1..3116 /gene="Bmp15" /gene_synonym="Bmp-15; GDF-9B" /note="bone morphogenetic protein 15" /db_xref="GeneID:12155" /db_xref="MGI:MGI:1316745" exon 1..683 /gene="Bmp15" /gene_synonym="Bmp-15; GDF-9B" /inference="alignment:Splign:2.1.0" misc_feature 308..310 /gene="Bmp15" /gene_synonym="Bmp-15; GDF-9B" /note="upstream in-frame stop codon" CDS 362..1540 /gene="Bmp15" /gene_synonym="Bmp-15; GDF-9B" /note="growth/differentiation factor 9B" /codon_start=1 /product="bone morphogenetic protein 15 preproprotein" /protein_id="NP_033887.1" /db_xref="CCDS:CCDS29958.1" /db_xref="GeneID:12155" /db_xref="MGI:MGI:1316745" /translation="
MALLTILRILLWGVVLFMEQRVQMAKPGWPSTALLADDPTLPSILDLAKEAPGKEMKQWPQGYPLRYMLKLYHRSADPHGHPRENRTIGAKMVRLVKPSANTVRPPRGSWHVQTLDFPLASNQVAYELIRATVVYRHQLHLVNYHLSCHVETWVPKCRTKHLPSSKSGSSKPSPMSKAWTEIDITHCIQQKLWNRKGRSVLRLRFMCQQQKGNETREFRWHGMTSLDVAFLLLYFNDTDDRVQGKLLARGQEELTDRESSFLMRSVRQACSIESDASCPSQEHDGSVNNQCSLHPYKVSFHQLGWDHWIIAPRLYTPNYCKGICTRVLPYGLNSPNHAIIQSLVNELVNHSVPQPSCVPYNFLPMSILLIETNGSILYKEYEGMIAQSCTCR"
sig_peptide 362..436 /gene="Bmp15" /gene_synonym="Bmp-15; GDF-9B" /note="/evidence=ECO:0000255; propagated from UniProtKB/Swiss-Prot (Q9Z0L4.1)" misc_feature 614..616 /gene="Bmp15" /gene_synonym="Bmp-15; GDF-9B" /note="N-linked (GlcNAc...) asparagine. /evidence=ECO:0000255; propagated from UniProtKB/Swiss-Prot (Q9Z0L4.1); glycosylation site" misc_feature 998..1000 /gene="Bmp15" /gene_synonym="Bmp-15; GDF-9B" /note="N-linked (GlcNAc...) asparagine. /evidence=ECO:0000255; propagated from UniProtKB/Swiss-Prot (Q9Z0L4.1); glycosylation site" misc_feature 1067..1069 /gene="Bmp15" /gene_synonym="Bmp-15; GDF-9B" /note="N-linked (GlcNAc...) asparagine. /evidence=ECO:0000255; propagated from UniProtKB/Swiss-Prot (Q9Z0L4.1); glycosylation site" mat_peptide 1163..1537 /gene="Bmp15" /gene_synonym="Bmp-15; GDF-9B" /product="Bone morphogenetic protein 15. /id=PRO_0000033895" /note="propagated from UniProtKB/Swiss-Prot (Q9Z0L4.1)" misc_feature 1226..1537 /gene="Bmp15" /gene_synonym="Bmp-15; GDF-9B" /note="transforming growth factor beta (TGF-beta) like domain found in TGF-beta superfamily; Region: TGF_beta_SF; cl40434" /db_xref="CDD:477357" misc_feature order(1247..1249,1253..1255,1310..1324,1424..1438, 1445..1447,1505..1513) /gene="Bmp15" /gene_synonym="Bmp-15; GDF-9B" /note="homodimer interface 1 [polypeptide binding]; other site" /db_xref="CDD:381672" misc_feature 1406..1408 /gene="Bmp15" /gene_synonym="Bmp-15; GDF-9B" /note="N-linked (GlcNAc...) asparagine. /evidence=ECO:0000255; propagated from UniProtKB/Swiss-Prot (Q9Z0L4.1); glycosylation site" misc_feature order(1424..1429,1433..1435,1496..1498,1505..1510) /gene="Bmp15" /gene_synonym="Bmp-15; GDF-9B" /note="homodimer interface 2 [polypeptide binding]; other site" /db_xref="CDD:381672" misc_feature 1478..1480 /gene="Bmp15" /gene_synonym="Bmp-15; GDF-9B" /note="N-linked (GlcNAc...) asparagine. /evidence=ECO:0000255; propagated from UniProtKB/Swiss-Prot (Q9Z0L4.1); glycosylation site" exon 684..3116 /gene="Bmp15" /gene_synonym="Bmp-15; GDF-9B" /inference="alignment:Splign:2.1.0" regulatory 3036..3041 /regulatory_class="polyA_signal_sequence" /gene="Bmp15" /gene_synonym="Bmp-15; GDF-9B" /note="hexamer: AATAAA" polyA_site 3064 /gene="Bmp15" /gene_synonym="Bmp-15; GDF-9B" /note="major polyA site" ORIGIN
tgcttccttttaacctattagattgggtgcaggccaggttcctggaatgggcctcttctcctcggttactttagcctgtctgagaactgctgtgtacttcccaccagtggggagtgggaagggcatgctgccttgtcccacttgctttttctgtttgttttcatgccaagaagcctagtcaggagactcgctttggcccagaagattctcccacaggaagtaagatagggtctgccagtcggcgtttctttttatttcttgccccgtctttggtatttgttaaaccaggatgtggaagaggtcagactgatgttctttggacttggttaggaatctgctgaaaagcaccaagctttgcaagatggcccttctcacaattcttagaattcttttgtggggagtggtgctttttatggaacagagggtccaaatggcaaagccagggtggccctccaccgccctccttgctgacgaccctacattgccctcaattttggatctggccaaagaagcccctggcaaggagatgaagcaatggccccaaggctatcccctgaggtacatgctcaagttataccatcgttcggctgacccgcatggccatccaagggagaaccgcacgattggagcgaaaatggtgaggctggtaaagccgtcggccaacacagtaaggcctcccagaggttcctggcatgtacagaccctggactttcctctagcatcaaaccaggtagcatacgaactaatcagagccactgtggtttaccgccatcaacttcatctagttaattaccatctctcctgccatgtggaaacttgggttcctaaatgccggaccaagcacttaccttcttctaaatcgggttcctcaaagccttctcccatgtctaaagcctggacagagatagatattacacattgtattcagcagaagctctggaatcgcaagggacggagtgttcttcgcctccgcttcatgtgtcagcagcaaaaaggcaatgagactcgtgagttccggtggcatggcatgacatccttggatgttgccttcttgctactctatttcaatgacaccgatgacagagttcagggtaaacttcttgcaagaggccaagaggagttaactgatagggaatcttcttttctcatgcggagtgtccggcaagcatgcagcattgaatctgatgcctcttgtccttctcaggaacatgatgggtctgtaaataaccagtgttccctccatccttacaaggtcagcttccaccaactaggctgggatcactggatcattgctcctcgtctctataccccaaattactgtaaaggaatctgtactcgggtattaccctatggtctcaattcacccaaccatgccatcattcagagccttgtcaatgaactagtgaatcacagtgtacctcagccttcctgtgtcccttataattttcttcctatgagcatcctcctgattgagaccaacgggagtatcttgtacaaggagtatgagggtatgattgcccagtcctgtacatgtagataatagtgaagttgttgctatctcaggtttcccaagaagctatagatgtttaaagaaaactgtgttaaagctggcagtgatctacccaacctacagattctgttccttatctttaaaaaatatattgtgcttatgcttaaaatataagagccctttgtactctataaacaaaatgctaggatcccatcttaatattttttaaaagtaatttaaaataccatgaaatggttatcttaagcattgtttaaatctctcaccccatttttgagctcctcagcttgtaaaaatgtttctggtgctggtatcctagcatggatcagtagaacttaactagcccccaatactgagataagatgctttctggagatacattattacatcatttttattgtgactttgggaaaaaaaatcaagaaaatactggtccatggtagaagaacatatggagtcctggaggtgacttcattctgggctcacttgattgatgtgtccagttgggctcttctgggcttaggtctctgggagacaaccttgctgtttgggaggaagtatagagctctttcttgaactaaattatgttcacaggatgatttcttgtttttttccctgttttttttgttttggattattattattattattattttgtgctgagaataagcaagtgttctaccactgtgctgtatccccagcccagtttatcttctctataattctatactatatttaagtgttgggacaatattgcaaatgaatgatgcttttttttttgttaaagatcttgaatgctttggagattaggagagagtgaaaagaaagaatttatatcttttattctctatggctataatctagagctctactttaatccctgagggatggggccagaggctcctctgagttctgtctcagacagcactactaataaacagctcttactaaggtactagttaaagaagcccagcatgtctcagtacctgcctagctattgactagttttatcacattctctctgggatggaacctgatttagggcatgggcatgtgctcatcattgttcattcctatctgttccttacatttcccatacattaactcagttatttctttctcaacagttgatgctcacaggactgaatatatgtggatctattccttagcatcattttgctcacatatctacttagaaatcaattcaggctttactgttcttctcttcagtattctcatgacaaccagtttcaagtcgctgtctctcctcccatctcaaagcacagcatggtttcccttaaaatgctctagtattactgtcttcactgagaaaagatggagctccctttgaacgctttacttggctcattgtcttctgaatagccagaactgaaaacctaggaagtcctttgatgaatacaaaaagttgacttttttgtgtgtgtgagacatggaatacccccctatttatatatttgtatgtttatgtattttcttaatcttaaagaataaattttcatttatgtgtgctttgcatataaagttagtaatttcaaaactgtacaaattataagagatgatgaaagct
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If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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