2024-09-29 11:22:45, GGRNA.v2 : RefSeq release 225 (Jul, 2024)
LOCUS NM_001384265 786 bp mRNA linear ROD 06-AUG-2023 DEFINITION Mus musculus claudin 25 (Cldn25), mRNA. ACCESSION NM_001384265 VERSION NM_001384265.1 KEYWORDS RefSeq; RefSeq Select. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 786) AUTHORS Tanaka H, Yamamoto Y, Kashihara H, Yamazaki Y, Tani K, Fujiyoshi Y, Mineta K, Takeuchi K, Tamura A and Tsukita S. TITLE Claudin-21 Has a Paracellular Channel Role at Tight Junctions JOURNAL Mol Cell Biol 36 (6), 954-964 (2016) PUBMED 26729464 REMARK GeneRIF: Claudin-21, which is more highly expressed in the embryonic than the postnatal stages, acts as a paracellular channel for small cations, such as Na(+), similar to the typical channel-type claudins claudin-2 and -15. Publication Status: Online-Only REFERENCE 2 (bases 1 to 786) AUTHORS Mineta K, Yamamoto Y, Yamazaki Y, Tanaka H, Tada Y, Saito K, Tamura A, Igarashi M, Endo T, Takeuchi K and Tsukita S. TITLE Predicted expansion of the claudin multigene family JOURNAL FEBS Lett 585 (4), 606-612 (2011) PUBMED 21276448 REFERENCE 3 (bases 1 to 786) AUTHORS Krause G, Winkler L, Mueller SL, Haseloff RF, Piontek J and Blasig IE. TITLE Structure and function of claudins JOURNAL Biochim Biophys Acta 1778 (3), 631-645 (2008) PUBMED 18036336 REMARK Review article COMMENT VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AC160137.2. ##RefSeq-Attributes-START## RefSeq Select criteria :: based on single protein-coding transcript ##RefSeq-Attributes-END## PRIMARY REFSEQ_SPAN PRIMARY_IDENTIFIER PRIMARY_SPAN COMP 1-786 AC160137.2 175577-176362 c FEATURES Location/Qualifiers source 1..786 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6" /db_xref="taxon:10090" /chromosome="9" /map="9 26.58 cM" gene 1..786 /gene="Cldn25" /gene_synonym="Cldn21; Cldn21-ps; Cldn25-ps; Gm16492; Gm513" /note="claudin 25" /db_xref="GeneID:100042785" /db_xref="MGI:MGI:3642767" exon 1..786 /gene="Cldn25" /gene_synonym="Cldn21; Cldn21-ps; Cldn25-ps; Gm16492; Gm513" /inference="alignment:Splign:2.1.0" CDS 49..741 /gene="Cldn25" /gene_synonym="Cldn21; Cldn21-ps; Cldn25-ps; Gm16492; Gm513" /note="claudin 21, pseudogene; claudin 25, pseudogene" /codon_start=1 /product="putative claudin-25" /protein_id="NP_001371194.1" /db_xref="GeneID:100042785" /db_xref="MGI:MGI:3642767" /translation="
MACSFRGRVQLGGLLLSVLGWVCSCVTTVLPQWKTLTLDLNEMETWVSGLWEACVNQEEAGTVCKAFESFLSLPQELQVARILMVASHGLGLLGLLLSSCGLECFRFHRPGGVFKTRLCLLGGTLEASASATTLFPVSWVAYATFQDFWDDSIPEIVPRWEFGDALFLGWAAGLFLAVGGLLLIFSACLENEDGSSSWMADATAPQACAPVEEEFDGSFHLTPRPVNQVI"
misc_feature 124..597 /gene="Cldn25" /gene_synonym="Cldn21; Cldn21-ps; Cldn25-ps; Gm16492; Gm513" /note="PMP-22/EMP/MP20/Claudin family; Region: PMP22_Claudin; cl21598" /db_xref="CDD:473919" ORIGIN
gctgaccagtccctgagctcattatcccctcctccagagggcacaaccatggcctgtagcttccgtgggagagtccagcttggaggtctgctcctctctgtccttggctgggtgtgctcctgtgtcaccaccgttcttccccagtggaagactctcactctggatctgaatgaaatggaaacctgggtctcgggactctgggaggcatgcgtgaatcaggaggaagctggcactgtatgcaaagccttcgagtcgtttttgtctctgccccaagagctacaggtagcccgaattctcatggtggcttcccatgggctgggactattgggacttctgctgtctagctgcgggttggaatgcttccggtttcacaggcctggaggagttttcaagactcggctgtgcctcctgggagggactctggaagcatcagcttcagctactaccctctttccagtctcctgggtggcctatgccacatttcaagacttctgggatgacagcatccctgagattgtgccccggtgggagtttggagacgccttgttcctgggctgggctgctgggcttttcctagctgtgggtggactcctcctcatcttttcagcttgcctggaaaatgaagatggatcttcttcctggatggctgatgccacggccccacaagcctgtgctccagtagaggaagaatttgatggttccttccatctcacaccaagaccggtgaaccaggtcatctagagctacagtctgcctaggactctctataataaaggaatgccagta
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Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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