LOCUS       NM_001382418            1588 bp    mRNA    linear   ROD 13-APR-2022
DEFINITION  Mus musculus RIKEN cDNA 4930519F16 gene (4930519F16Rik), transcript
            variant 2, mRNA.
ACCESSION   NM_001382418
VERSION     NM_001382418.1
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1588)
  AUTHORS   Chureau C, Prissette M, Bourdet A, Barbe V, Cattolico L, Jones L,
            Eggen A, Avner P and Duret L.
  TITLE     Comparative sequence analysis of the X-inactivation center region
            in mouse, human, and bovine
  JOURNAL   Genome Res 12 (6), 894-908 (2002)
   PUBMED   12045143
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AL772378.8.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR5189685.165279.1 [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMN00849374,
                                           SAMN00849384 [ECO:0006172]
            ##Evidence-Data-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-87                AL772378.8         57862-57948         c
            88-256              AL772378.8         57167-57335         c
            257-504             AL772378.8         35365-35612         c
            505-644             AL772378.8         34145-34284         c
            645-791             AL772378.8         31371-31517         c
            792-1588            AL772378.8         30117-30913         c
FEATURES             Location/Qualifiers
     source          1..1588
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="X"
                     /map="X 45.97 cM"
     gene            1..1588
                     /gene="4930519F16Rik"
                     /gene_synonym="Ppnx"
                     /note="RIKEN cDNA 4930519F16 gene"
                     /db_xref="GeneID:75106"
                     /db_xref="MGI:MGI:1922356"
     exon            1..87
                     /gene="4930519F16Rik"
                     /gene_synonym="Ppnx"
                     /inference="alignment:Splign:2.1.0"
     misc_feature    21..23
                     /gene="4930519F16Rik"
                     /gene_synonym="Ppnx"
                     /note="upstream in-frame stop codon"
     CDS             30..836
                     /gene="4930519F16Rik"
                     /gene_synonym="Ppnx"
                     /note="isoform 2 precursor is encoded by transcript
                     variant 2; novel gene likely coding for a serine
                     proteases, trypsin family/Chymotrypsin serine protease
                     family (S1) containing protein"
                     /codon_start=1
                     /product="uncharacterized protein LOC75106 isoform 2
                     precursor"
                     /protein_id="NP_001369347.1"
                     /db_xref="GeneID:75106"
                     /db_xref="MGI:MGI:1922356"
                     /translation="

MKALLWLYCVLLFVCYCWAVPQMSRLSVSSSSVTGNLPPTNSYIDIPWLASMPDNCQGTILTTRLILSTANCLKKSKPLYLDISGVNYPESTSHGQRICLHPKFNLNDENDPMKADIGLVILEKPIDGDEIPLSQSPSTSLKSCSKCQYKSCYVYEYQSSKKLGTSRVKKIDVQLLDFSMCYPQHSSLEKAVGLCIQSQPREDCWVQRASPVLCLLMNHWELVGLIHKTSKICQNPAVIIRTAPYFTWIKQFIKQTILMSLLIKSWQI"

     sig_peptide     30..86
                     /gene="4930519F16Rik"
                     /gene_synonym="Ppnx"
                     /inference="COORDINATES: ab initio prediction:SignalP:4.0"
     misc_feature    168..776
                     /gene="4930519F16Rik"
                     /gene_synonym="Ppnx"
                     /note="Trypsin-like serine protease; Many of these are
                     synthesized as inactive precursor zymogens that are
                     cleaved during limited proteolysis to generate their
                     active forms. Alignment contains also inactive enzymes
                     that have substitutions of the catalytic triad...; Region:
                     Tryp_SPc; cl21584"
                     /db_xref="CDD:451320"
     exon            88..256
                     /gene="4930519F16Rik"
                     /gene_synonym="Ppnx"
                     /inference="alignment:Splign:2.1.0"
     exon            257..504
                     /gene="4930519F16Rik"
                     /gene_synonym="Ppnx"
                     /inference="alignment:Splign:2.1.0"
     exon            505..644
                     /gene="4930519F16Rik"
                     /gene_synonym="Ppnx"
                     /inference="alignment:Splign:2.1.0"
     exon            645..791
                     /gene="4930519F16Rik"
                     /gene_synonym="Ppnx"
                     /inference="alignment:Splign:2.1.0"
     exon            792..1588
                     /gene="4930519F16Rik"
                     /gene_synonym="Ppnx"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      

acaacacacctcttgccagttgagtcgaaatgaaggctctactttggctttactgtgttttgctttttgtttgctactgctgggctgtgccccaaatgtcaagactgagtgtgagttcaagctcagtgactggaaatctaccaccaacgaatagctacattgatataccatggctggcatctatgcctgataattgccagggtactatcctgactacaaggctgattctttcaacagccaactgtctgaagaaatcgaaaccgttatacctggacatttcaggagtaaattacccagaaagcacttcacatggtcaaagaatctgcctccaccccaagtttaatctcaacgatgaaaatgatccaatgaaagcagatattggcttggttattcttgaaaagcctatcgatggggatgaaataccactatcccagtcccctagtacatccctgaagagctgttctaagtgccaatacaagagctgttatgtgtatgaatatcagagtagcaagaaacttggaaccagcagagtaaagaagatagatgtgcagctgctagatttctcaatgtgctacccccaacattccagtttagagaaggccgtgggcttgtgtattcagagtcaaccacgggaagactgctgggtacagagagccagtcctgttctatgtctcctaatgaaccactgggaactagtgggcctcatacataagacttcaaagatatgtcaaaatcccgcagtcatcattagaacagctccttactttacctggataaaacaattcatcaagcaaacaatactgatgagtcttttgataaaatcatggcagatataattaaacaatcaagcccaacagaagatgatgaagaggaacctgaaaatctctatgaggatagtatggctgataattattggacagaaaatgttgctgatttagaaaaataccagaatcttttgaggaccatgtcagaaaaacctcagaatcaatatacaactaaggccagcttaccaccaaatttatatttacctgaaggagaggtaccctggggactctctacttcaggtgcaactgttaaaaaaacagacctgcccatgaaatgtctacaaccaaatgaaacatctaatatgtctccttttgaaagtagagggattcccaaaccaagtggtgtaattaagctctggaattccccttttggctacaatgttgtaagttctcaagatcaagcagttactgattcagtaagagctcagaattatcctgtaactgatgccagtcaactccagattctaccagtggacagcattggtatgccctcgactcctaaatttacctatgaatctttacctactgattttgaggctaaaacccatcaaaatccaaattagcacgatatagtaccaccacaaggccagtcttcatcatttaaggccatttcacaacctgtagttgaaattaaaccccaactgaaagctgaatctgagagaactagacacccagacttgaaatgtcatttgtccttatggaaaattatataaacacttatgtcttttcaaaaaaattaaaataaaaacaaattgaaaagcaaa

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