LOCUS       NM_001363793            2797 bp    mRNA    linear   ROD 12-SEP-2023
DEFINITION  Mus musculus FK506 binding protein 14 (Fkbp14), transcript variant
            3, mRNA.
ACCESSION   NM_001363793
VERSION     NM_001363793.1
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 2797)
  AUTHORS   Bedogni F and Hevner RF.
  TITLE     Cell-Type-Specific Gene Expression in Developing Mouse Neocortex:
            Intermediate Progenitors Implicated in Axon Development
  JOURNAL   Front Mol Neurosci 14, 686034 (2021)
   PUBMED   34321999
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2797)
  AUTHORS   Carninci P, Waki K, Shiraki T, Konno H, Shibata K, Itoh M, Aizawa
            K, Arakawa T, Ishii Y, Sasaki D, Bono H, Kondo S, Sugahara Y, Saito
            R, Osato N, Fukuda S, Sato K, Watahiki A, Hirozane-Kishikawa T,
            Nakamura M, Shibata Y, Yasunishi A, Kikuchi N, Yoshiki A, Kusakabe
            M, Gustincich S, Beisel K, Pavan W, Aidinis V, Nakagawara A, Held
            WA, Iwata H, Kono T, Nakauchi H, Lyons P, Wells C, Hume DA,
            Fagiolini M, Hensch TK, Brinkmeier M, Camper S, Hirota J, Mombaerts
            P, Muramatsu M, Okazaki Y, Kawai J and Hayashizaki Y.
  TITLE     Targeting a complex transcriptome: the construction of the mouse
            full-length cDNA encyclopedia
  JOURNAL   Genome Res 13 (6B), 1273-1289 (2003)
   PUBMED   12819125
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            BY775871.1 and BC034313.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC034313.1, BI735465.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849381, SAMN01164131
                                           [ECO:0000348]
            ##Evidence-Data-END##
            COMPLETENESS: full length.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-26                BY775871.1         2-27
            27-2797             BC034313.1         6-2776
FEATURES             Location/Qualifiers
     source          1..2797
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="6"
                     /map="6 27.01 cM"
     gene            1..2797
                     /gene="Fkbp14"
                     /gene_synonym="FKBP-14; FKBP22"
                     /note="FK506 binding protein 14"
                     /db_xref="GeneID:231997"
                     /db_xref="MGI:MGI:2387639"
     exon            1..328
                     /gene="Fkbp14"
                     /gene_synonym="FKBP-14; FKBP22"
                     /inference="alignment:Splign:2.1.0"
     exon            329..480
                     /gene="Fkbp14"
                     /gene_synonym="FKBP-14; FKBP22"
                     /inference="alignment:Splign:2.1.0"
     exon            481..570
                     /gene="Fkbp14"
                     /gene_synonym="FKBP-14; FKBP22"
                     /inference="alignment:Splign:2.1.0"
     misc_feature    486..488
                     /gene="Fkbp14"
                     /gene_synonym="FKBP-14; FKBP22"
                     /note="upstream in-frame stop codon"
     CDS             492..857
                     /gene="Fkbp14"
                     /gene_synonym="FKBP-14; FKBP22"
                     /EC_number="5.2.1.8"
                     /note="isoform 3 is encoded by transcript variant 3;
                     peptidyl-prolyl cis-trans isomerase FKBP14; rotamase;
                     PPIase FKBP14"
                     /codon_start=1
                     /product="peptidyl-prolyl cis-trans isomerase FKBP14
                     isoform 3"
                     /protein_id="NP_001350722.1"
                     /db_xref="GeneID:231997"
                     /db_xref="MGI:MGI:2387639"
                     /translation="

MLACLLGKIPAFPPVYACPFPVSIGNGKIPPESTLIFNIDLLEIRNGPRSHESFQEMDLNDDWRLSKHEVKVYLQKEFEKHGAVVNESHHDALVEDIFDKEDEDKDGFISAREFTYVHDEL"

     misc_feature    <567..626
                     /gene="Fkbp14"
                     /gene_synonym="FKBP-14; FKBP22"
                     /note="FKBP-type peptidyl-prolyl cis-trans isomerase
                     [Posttranslational modification, protein turnover,
                     chaperones]; Region: FkpA; COG0545"
                     /db_xref="CDD:223619"
     misc_feature    642..833
                     /gene="Fkbp14"
                     /gene_synonym="FKBP-14; FKBP22"
                     /note="EF-hand domain pair; Region: EF-hand_7; pfam13499"
                     /db_xref="CDD:433258"
     exon            571..698
                     /gene="Fkbp14"
                     /gene_synonym="FKBP-14; FKBP22"
                     /inference="alignment:Splign:2.1.0"
     exon            699..2780
                     /gene="Fkbp14"
                     /gene_synonym="FKBP-14; FKBP22"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      

agaaaaagtgccacgtcttcctgggagtgtgtctgttgggggagtcctgaacttgcttggcctaagctgtctccgcttttggcacatttttaactctatgaagtcgggggcctttcctctgctttggtaacatgaggtttttcttgtggaacgctatcttggcactgtgggtcacggttctgagcggagctctgattcctgagccagaagtgaaaatcgaagttctccagaagccattcatctgccatcgcaagaccaagggaggggatctgatgttggtccactacgaaggctatttagaaaaggacggctccctgtttcattccactcacaaacataacaatggtcagcctgtctggttcaccctgggcatactggaggttctcaaaggctgggaccaaggcttgaagggaatgtgtgtgggagagaagcgaaagctcaccgttcctcctgccctgggctatggcaaagaaggaaaagtattttagtacatgcttgcatgcctccttggaaagataccagctttcccaccggtctatgcatgtcccttccctgtctccatcggcaacggtaaaatccctccagagagcacactgatattcaacattgacctcctggaaattcgaaatggcccaaggtcccacgagtcgtttcaagaaatggacctcaatgacgactggagactctctaagcatgaggttaaagtgtatttacagaaggagtttgagaagcacggtgccgtggtgaatgaaagccatcacgatgctttggtggaagatatttttgataaagaagatgaagacaaagatggatttatatctgccagagaatttacatatgtgcacgacgaactgtagggacgcgcctgccattttatacacgttcatttctaatggaaaggcagcacctttgaacaaagcttttctctttgcctttcttgtttttagttttatattctttttctattatttaaagaacctcagagactttgtaaatatcgttcgtatctttccagtgagttattgggcaggaacggttgtctttgagtagaggactcccaggccgcttctaagctcacatgggagttggctttgcttccttgcttctttctaatggtaacatggcaactggaaacacaccccagcatacacacagggtgtagcacagaccagggccctgtacttctccctccctctgtcttctcaaagtccagttactggcatatttgaaagcttttgtgctagttcaaggcttgctattttcatgttatagtgaagtgattttttctttacctgcttttgagtccctgcttgcaggcaggaggaatatggtggaccttattccttaagagctctggccttactgtggagatacacaatgtggatgaatgagggaggtagcaactcatgaataggtggtcagagacgtcctagtggctaataaaccattacaataagtcagacaaataatatatttgtttccttgtaatcaacacaccaaaatatggtaggcatggcagagagttgtatttataattaatgtttacttttggagctaccaagttagccttctggttcttaaataaataaagtttgcagctagtatattactttgcaacagcattgaatcctgggagaaattagtatgtcaatgagacttccccatttctgattcatgaaaaataaggctaaccaataacagctactattaatactgggcactgacatttatcattttatctcaaattggcttccaaaaatgactactacttctgttttttagattgtttttaatcaaattggcttttatcttaaaacaaacttcccagacctccatttgttatgctcctcatagtttacacgtgcacaattgcctgactgggggtgtctgacacccctgggaagctgctgggtcttggggtacttctttataggtgagaagctctgttcagagattggctggtgagcccagccttggtgcctaagctgtagatgcaccttcagtccctgagttcagtcttccacttctctgctaatgaagatgcagcaagtttgcgtctctctctcttggtccttatttcccttagcatcttcacctctggggataattcctgccagttcctagctgatcacagctttccttaggatccaggaaggtctgtgttttctgagaatagtcttgctttgtgtgtctctctcccagtaaccccctgagaggggttaggtgtatgtcttatggcatctaagttcacctgttcctgtcacttcctgttgtttgtagacattgtattgcaacacgaattctgcattgacattgttactggcgagaattactcaagggcttgttcttgaagatgtcaggggtaactgtaactgttgccacctgcatttttctggggaggttgtgagaaagccagtgagtgtcgtagaccagtggtgtgtcttgaaggctgctttgctccaagctgccaccaccatctgcgctggagcagtgaagaagaaagaatcttgaccactcaattacatggatttttatcagatctcagctaaactttcaaacagaagtatgaaagaaagacatacctggagaaaatggttgttaaagccatctgccattgtgtatagcaatgcctttgcaccctcccattagtgggaatagtcaaacaccaaatgtgacttcacatgtatatactttgactcctagctgctctctgtgtaatatttaaatttctatgtctattgtgacactctttttgaaaataaagtttatttgggaaataaaaaaaaaaaaaaaaaaa

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