LOCUS       NM_001363792            2840 bp    mRNA    linear   ROD 12-SEP-2023
DEFINITION  Mus musculus FK506 binding protein 14 (Fkbp14), transcript variant
            2, mRNA.
ACCESSION   NM_001363792
VERSION     NM_001363792.1
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 2840)
  AUTHORS   Bedogni F and Hevner RF.
  TITLE     Cell-Type-Specific Gene Expression in Developing Mouse Neocortex:
            Intermediate Progenitors Implicated in Axon Development
  JOURNAL   Front Mol Neurosci 14, 686034 (2021)
   PUBMED   34321999
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2840)
  AUTHORS   Carninci P, Waki K, Shiraki T, Konno H, Shibata K, Itoh M, Aizawa
            K, Arakawa T, Ishii Y, Sasaki D, Bono H, Kondo S, Sugahara Y, Saito
            R, Osato N, Fukuda S, Sato K, Watahiki A, Hirozane-Kishikawa T,
            Nakamura M, Shibata Y, Yasunishi A, Kikuchi N, Yoshiki A, Kusakabe
            M, Gustincich S, Beisel K, Pavan W, Aidinis V, Nakagawara A, Held
            WA, Iwata H, Kono T, Nakauchi H, Lyons P, Wells C, Hume DA,
            Fagiolini M, Hensch TK, Brinkmeier M, Camper S, Hirota J, Mombaerts
            P, Muramatsu M, Okazaki Y, Kawai J and Hayashizaki Y.
  TITLE     Targeting a complex transcriptome: the construction of the mouse
            full-length cDNA encyclopedia
  JOURNAL   Genome Res 13 (6B), 1273-1289 (2003)
   PUBMED   12819125
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            BC024846.1 and AK163384.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK163384.1 [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMN00849374,
                                           SAMN00849375 [ECO:0006172]
            ##Evidence-Data-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-36                BC024846.1         1-36
            37-1866             AK163384.1         4-1833
            1867-2840           BC024846.1         2115-3088
FEATURES             Location/Qualifiers
     source          1..2840
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10090"
                     /chromosome="6"
                     /map="6 27.01 cM"
     gene            1..2840
                     /gene="Fkbp14"
                     /gene_synonym="FKBP-14; FKBP22"
                     /note="FK506 binding protein 14"
                     /db_xref="GeneID:231997"
                     /db_xref="MGI:MGI:2387639"
     exon            1..96
                     /gene="Fkbp14"
                     /gene_synonym="FKBP-14; FKBP22"
                     /inference="alignment:Splign:2.1.0"
     exon            97..461
                     /gene="Fkbp14"
                     /gene_synonym="FKBP-14; FKBP22"
                     /inference="alignment:Splign:2.1.0"
     misc_feature    211..213
                     /gene="Fkbp14"
                     /gene_synonym="FKBP-14; FKBP22"
                     /note="upstream in-frame stop codon"
     exon            462..613
                     /gene="Fkbp14"
                     /gene_synonym="FKBP-14; FKBP22"
                     /inference="alignment:Splign:2.1.0"
     CDS             547..900
                     /gene="Fkbp14"
                     /gene_synonym="FKBP-14; FKBP22"
                     /EC_number="5.2.1.8"
                     /note="isoform 2 is encoded by transcript variant 2;
                     peptidyl-prolyl cis-trans isomerase FKBP14; rotamase;
                     PPIase FKBP14"
                     /codon_start=1
                     /product="peptidyl-prolyl cis-trans isomerase FKBP14
                     isoform 2"
                     /protein_id="NP_001350721.1"
                     /db_xref="CCDS:CCDS90048.1"
                     /db_xref="GeneID:231997"
                     /db_xref="MGI:MGI:2387639"
                     /translation="

MCVGEKRKLTVPPALGYGKEGKGKIPPESTLIFNIDLLEIRNGPRSHESFQEMDLNDDWRLSKHEVKVYLQKEFEKHGAVVNESHHDALVEDIFDKEDEDKDGFISAREFTYVHDEL"

     misc_feature    <547..669
                     /gene="Fkbp14"
                     /gene_synonym="FKBP-14; FKBP22"
                     /note="FKBP-type peptidyl-prolyl cis-trans isomerase
                     [Posttranslational modification, protein turnover,
                     chaperones]; Region: FkpA; COG0545"
                     /db_xref="CDD:223619"
     misc_feature    685..876
                     /gene="Fkbp14"
                     /gene_synonym="FKBP-14; FKBP22"
                     /note="EF-hand domain pair; Region: EF-hand_7; pfam13499"
                     /db_xref="CDD:433258"
     exon            614..741
                     /gene="Fkbp14"
                     /gene_synonym="FKBP-14; FKBP22"
                     /inference="alignment:Splign:2.1.0"
     exon            742..2823
                     /gene="Fkbp14"
                     /gene_synonym="FKBP-14; FKBP22"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      

tatgatccttagcgggccccactcccaagagtctctgagcatcattagctgcaggagatggaggagaaagaggaggagcaggaggacgacttcaagagttctgaaacaaaagaaatgttcggagagaaaaggccgatcgccagcgtacacttcagggcttagggctgcggtgctagagttccactacctcggtcggcagggggatgaccctgaaggtgcctagggagatcgactgcgtggagactctggaatccaggggttggtggcactcggcaccctgcagctgggctgcgcggcccaagcgaggccgccccccacccaattcgcgagattgaggtggaccccgcagcggacccaggctgccggcttcacccggtacccaactctccatccgggccgcgagccggcggagggtgccgcctggcgcaccgcacccacggaagccggcactcaccgctcagtcacaaacataacaatggtcagcctgtctggttcaccctgggcatactggaggttctcaaaggctgggaccaaggcttgaagggaatgtgtgtgggagagaagcgaaagctcaccgttcctcctgccctgggctatggcaaagaaggaaaaggtaaaatccctccagagagcacactgatattcaacattgacctcctggaaattcgaaatggcccaaggtcccacgagtcgtttcaagaaatggacctcaatgacgactggagactctctaagcatgaggttaaagtgtatttacagaaggagtttgagaagcacggtgccgtggtgaatgaaagccatcacgatgctttggtggaagatatttttgataaagaagatgaagacaaagatggatttatatctgccagagaatttacatatgtgcacgacgaactgtagggacgcgcctgccattttatacacgttcatttctaatggaaaggcagcacctttgaacaaagcttttctctttgcctttcttgtttttagttttatattctttttctattatttaaagaacctcagagactttgtaaatatcgttcgtatctttccagtgagttattgggcaggaacggttgtctttgagtagaggactcccaggccgcttctaagctcacatgggagttggctttgcttccttgcttctttctaatggtaacatggcaactggaaacacaccccagcatacacacagggtgtagcacagaccagggccctgtacttctccctccctctgtcttctcaaagtccagttactggcatatttgaaagcttttgtgctagttcaaggcttgctattttcatgttatagtgaagtgattttttctttacctgcttttgagtccctgcttgcaggcaggaggaatatggtggaccttattccttaagagctctggccttactgtggagatacacaatgtggatgaatgagggaggtagcaactcatgaataggtggtcagagacgtcctagtggctaataaaccattacaataagtcagacaaataatatatttgtttccttgtaatcaacacaccaaaatatggtaggcatggcagagagttgtatttataattaatgtttacttttggagctaccaagttagccttctggttcttaaataaataaagtttgcagctagtatattactttgcaacagcattgaatcctgggagaaattagtatgtcaatgagacttccccatttctgattcatgaaaaataaggctaaccaataacagctactattaatactgggcactgacatttatcattttatctcaaattggcttccaaaaatgactactacttctgttttttagattgtttttaatcaaattggcttttatcttaaaacaaacttcccagacctccatttgttatgctcctcatagtttacacgtgcacaattgcctgactgggggtgtctgacacccctgggaagctgctgggtcttggggtacttctttataggtgagaagctctgttcagagattggctggtgagcccagccttggtgcctaagctgtagatgcaccttcagtccctgagttcagtcttccacttctctgctaatgaagatgcagcaagtttgcgtctctctctcttggtccttatttcccttagcatcttcacctctggggataattcctgccagttcctagctgatcacagctttccttaggatccaggaaggtctgtgttttctgagaatagtcttgctttgtgtgtctctctcccagtaaccccctgagaggggttaggtgtatgtcttatggcatctaagttcacctgttcctgtcacttcctgttgtttgtagacattgtattgcaacacgaattctgcattgacattgttactggcgagaattactcaagggcttgttcttgaagatgtcaggggtaactgtaactgttgccacctgcatttttctggggaggttgtgagaaagccagtgagtgtcgtagaccagtggtgtgtcttgaaggctgctttgctccaagctgccaccaccatctgcgctggagcagtgaagaagaaagaatcttgaccactcaattacatggatttttatcagatctcagctaaactttcaaacagaagtatgaaagaaagacatacctggagaaaatggttgttaaagccatctgccattgtgtatagcaatgcctttgcaccctcccattagtgggaatagtcaaacaccaaatgtgacttcacatgtatatactttgactcctagctgctctctgtgtaatatttaaatttctatgtctattgtgacactctttttgaaaataaagtttatttgggaaataaaaaaaaaaaaaaaaaaa

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