ver.2
Home
|
Help
|
Advanced search
Previous release (v1)
2024-09-28 11:20:02, GGRNA.v2 : RefSeq release 225 (Jul, 2024)
LOCUS NM_001284248 5613 bp mRNA linear ROD 02-JUN-2024
DEFINITION Mus musculus histone deacetylase 5 (Hdac5), transcript variant 3,
mRNA.
ACCESSION NM_001284248
VERSION NM_001284248.2
KEYWORDS RefSeq.
SOURCE Mus musculus (house mouse)
ORGANISM Mus musculus
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE 1 (bases 1 to 5613)
AUTHORS Zhao,Y., Wang,H., Tang,Y., Wang,J., Wu,X., He,Z., He,Y. and Tang,Z.
TITLE SNHG16/miR-205/HDAC5 is involved in the progression of renal
fibrosis
JOURNAL J Biochem Mol Toxicol 38 (1), e23617 (2024)
PUBMED 38079211
REMARK GeneRIF: SNHG16/miR-205/HDAC5 is involved in the progression of
renal fibrosis.
REFERENCE 2 (bases 1 to 5613)
AUTHORS Zhu,C., Piao,Z. and Jin,L.
TITLE HDAC5 inhibition attenuates ventricular remodeling and cardiac
dysfunction
JOURNAL Orphanet J Rare Dis 18 (1), 266 (2023)
PUBMED 37667300
REMARK GeneRIF: HDAC5 inhibition attenuates ventricular remodeling and
cardiac dysfunction.
Publication Status: Online-Only
REFERENCE 3 (bases 1 to 5613)
AUTHORS Wang,J., Wu,S., Liu,L., Pang,Y., Li,Z. and Mu,H.
TITLE HDAC5-Mediated Acetylation of p100 Suppresses Its Processing
JOURNAL Int Dent J 73 (3), 387-394 (2023)
PUBMED 36156247
REMARK GeneRIF: HDAC5-Mediated Acetylation of p100 Suppresses Its
Processing.
REFERENCE 4 (bases 1 to 5613)
AUTHORS Kim,S.J., Hotta-Hirashima,N., Asano,F., Kitazono,T., Iwasaki,K.,
Nakata,S., Komiya,H., Asama,N., Matsuoka,T., Fujiyama,T., Ikkyu,A.,
Kakizaki,M., Kanno,S., Choi,J., Kumar,D., Tsukamoto,T.,
Elhosainy,A., Mizuno,S., Miyazaki,S., Tsuneoka,Y., Sugiyama,F.,
Takahashi,S., Hayashi,Y., Muratani,M., Liu,Q., Miyoshi,C.,
Yanagisawa,M. and Funato,H.
TITLE Kinase signalling in excitatory neurons regulates sleep quantity
and depth
JOURNAL Nature 612 (7940), 512-518 (2022)
PUBMED 36477539
REFERENCE 5 (bases 1 to 5613)
AUTHORS Sharma,P., Karnam,K., Mahale,A., Sedmaki,K., Krishna Venuganti,V.
and Kulkarni,O.P.
TITLE HDAC5 RNA interference ameliorates acute renal injury by
upregulating KLF2 and inhibiting NALP3 expression in a mouse model
of oxalate nephropathy
JOURNAL Int Immunopharmacol 112, 109264 (2022)
PUBMED 36183679
REMARK GeneRIF: HDAC5 RNA interference ameliorates acute renal injury by
upregulating KLF2 and inhibiting NALP3 expression in a mouse model
of oxalate nephropathy.
REFERENCE 6 (bases 1 to 5613)
AUTHORS Lemercier,C., Verdel,A., Galloo,B., Curtet,S., Brocard,M.P. and
Khochbin,S.
TITLE mHDA1/HDAC5 histone deacetylase interacts with and represses MEF2A
transcriptional activity
JOURNAL J Biol Chem 275 (20), 15594-15599 (2000)
PUBMED 10748098
REFERENCE 7 (bases 1 to 5613)
AUTHORS Zhou,X., Richon,V.M., Rifkind,R.A. and Marks,P.A.
TITLE Identification of a transcriptional repressor related to the
noncatalytic domain of histone deacetylases 4 and 5
JOURNAL Proc Natl Acad Sci U S A 97 (3), 1056-1061 (2000)
PUBMED 10655483
REFERENCE 8 (bases 1 to 5613)
AUTHORS Kao,H.Y., Downes,M., Ordentlich,P. and Evans,R.M.
TITLE Isolation of a novel histone deacetylase reveals that class I and
class II deacetylases promote SMRT-mediated repression
JOURNAL Genes Dev 14 (1), 55-66 (2000)
PUBMED 10640276
REFERENCE 9 (bases 1 to 5613)
AUTHORS Grozinger,C.M., Hassig,C.A. and Schreiber,S.L.
TITLE Three proteins define a class of human histone deacetylases related
to yeast Hda1p
JOURNAL Proc Natl Acad Sci U S A 96 (9), 4868-4873 (1999)
PUBMED 10220385
REFERENCE 10 (bases 1 to 5613)
AUTHORS Verdel,A. and Khochbin,S.
TITLE Identification of a new family of higher eukaryotic histone
deacetylases. Coordinate expression of differentiation-dependent
chromatin modifiers
JOURNAL J Biol Chem 274 (4), 2440-2445 (1999)
PUBMED 9891014
COMMENT VALIDATED REFSEQ: This record has undergone validation or
preliminary review. The reference sequence was derived from
AL954730.15.
On Apr 21, 2022 this sequence version replaced NM_001284248.1.
Publication Note: This RefSeq record includes a subset of the
publications that are available for this gene. Please see the Gene
record to access additional publications.
##Evidence-Data-START##
Transcript exon combination :: BC058554.1 [ECO:0000332]
RNAseq introns :: mixed sample support SAMN00849374,
SAMN00849375 [ECO:0006172]
##Evidence-Data-END##
COMPLETENESS: complete on the 3' end.
PRIMARY REFSEQ_SPAN PRIMARY_IDENTIFIER PRIMARY_SPAN COMP
1-138 AL954730.15 63571-63708 c
139-360 AL954730.15 58300-58521 c
361-444 AL954730.15 55334-55417 c
445-581 AL954730.15 52711-52847 c
582-947 AL954730.15 51982-52347 c
948-1207 AL954730.15 40473-40732 c
1208-1352 AL954730.15 40196-40340 c
1353-1467 AL954730.15 39988-40102 c
1468-1598 AL954730.15 39356-39486 c
1599-1745 AL954730.15 39051-39197 c
1746-1858 AL954730.15 38850-38962 c
1859-1990 AL954730.15 38398-38529 c
1991-2213 AL954730.15 37997-38219 c
2214-2425 AL954730.15 36110-36321 c
2426-2707 AL954730.15 35619-35900 c
2708-2879 AL954730.15 34799-34970 c
2880-3013 AL954730.15 33966-34099 c
3014-3134 AL954730.15 33535-33655 c
3135-3184 AL954730.15 33202-33251 c
3185-3292 AL954730.15 32932-33039 c
3293-3348 AL954730.15 32571-32626 c
3349-3436 AL954730.15 32363-32450 c
3437-3556 AL954730.15 31232-31351 c
3557-3654 AL954730.15 30905-31002 c
3655-3773 AL954730.15 30625-30743 c
3774-3907 AL954730.15 30105-30238 c
3908-3992 AL954730.15 29804-29888 c
3993-4162 AL954730.15 29514-29683 c
4163-5613 AL954730.15 27984-29434 c
FEATURES Location/Qualifiers
source 1..5613
/organism="Mus musculus"
/mol_type="mRNA"
/strain="C57BL/6"
/db_xref="taxon:10090"
/chromosome="11"
/map="11 65.82 cM"
gene 1..5613
/gene="Hdac5"
/gene_synonym="HD5; Hdac4; mHDA1; mKIAA0600"
/note="histone deacetylase 5"
/db_xref="GeneID:15184"
/db_xref="MGI:MGI:1333784"
exon 1..138
/gene="Hdac5"
/gene_synonym="HD5; Hdac4; mHDA1; mKIAA0600"
/inference="alignment:Splign:2.1.0"
exon 139..360
/gene="Hdac5"
/gene_synonym="HD5; Hdac4; mHDA1; mKIAA0600"
/inference="alignment:Splign:2.1.0"
exon 361..444
/gene="Hdac5"
/gene_synonym="HD5; Hdac4; mHDA1; mKIAA0600"
/inference="alignment:Splign:2.1.0"
exon 445..581
/gene="Hdac5"
/gene_synonym="HD5; Hdac4; mHDA1; mKIAA0600"
/inference="alignment:Splign:2.1.0"
exon 582..947
/gene="Hdac5"
/gene_synonym="HD5; Hdac4; mHDA1; mKIAA0600"
/inference="alignment:Splign:2.1.0"
misc_feature 629..631
/gene="Hdac5"
/gene_synonym="HD5; Hdac4; mHDA1; mKIAA0600"
/note="upstream in-frame stop codon"
CDS 797..4162
/gene="Hdac5"
/gene_synonym="HD5; Hdac4; mHDA1; mKIAA0600"
/EC_number="3.5.1.98"
/note="isoform 3 is encoded by transcript variant 3;
histone deacetylase mHDA1; histone deacetylase 4"
/codon_start=1
/product="histone deacetylase 5 isoform 3"
/protein_id="NP_001271177.1"
/db_xref="CCDS:CCDS70320.1"
/db_xref="GeneID:15184"
/db_xref="MGI:MGI:1333784"
/translation="
MLLVPKAQGLVEMLQTIYETESCFSADGMSGREPSLEILPRTPLHSIPVAVEVKPVLPGAMPSSMGGGGGGSPSPVELRGALAGPMDPALREQQLQQELLVLKQQQQLQKQLLFAEFQKQHDHLTRQHEVQLQKHLKQQQEMLAAKRQQELEQQRQREQQRQEELEKQRLEQQLLILRNKEKSKESAIASTEVKLRLQEFLLSKSKEPTPGGLNHSLPQHPKCWGAHHASLDQSSPPQSGPPGTPPSYKLPLLGPYDSRDDFPLRKTASEPNLKVRSRLKQKVAERRSSPLLRRKDGTVISTFKKRAVEITGTGPGVSSVCNSAPGSGPSSPNSSHSTIAENGFTGSVPNIPTEMIPQHRALPLDSSPNQFSLYTSPSLPNISLGLQATVTVTNSHLTASPKLSTQQEAERQALQSLRQGGTLTGKFMSTSSIPGCLLGVALEGDTSPHGHASLLQHVLLLEQARQQSTLIAVPLHGQSPLVTGERVATSMRTVGKLPRHRPLSRTQSSPLPQSPQALQQLVMQQQHQQFLEKQKQQQMQLGKILTKTGELSRQPTTHPEETEEELTEQQEALLGEGALTIPREGSTESESTQEDLEEEEEEEEEEEEDCIQVKDEDGESGPDEGPDLEESSAGYKKLFADAQQLQPLQVYQAPLSLATVPHQALGRTQSSPAAPGSMKSPTDQPTVVKHLFTTGVVYDTFMLKHQCMCGNTHVHPEHAGRIQSIWSRLQETGLLGKCERIRGRKATLDEIQTVHSEYHTLLYGTSPLNRQKLDSKKLLGPISQKMYAMLPCGGIGVDSDTVWNEMHSSSAVRMAVGCLVELAFKVAAGELKNGFAIIRPPGHHAEESTAMGFCFFNSVAITAKLLQQKLSVGKVLIVDWDIHHGNGTQQAFYNDPSVLYISLHRYDNGNFFPGSGAPEEVGGGPGVGYNVNVAWTGGVDPPIGDVEYLTAFRTVVMPIAQEFSPDVVLVSAGFDAVEGHLSPLGGYSVTARCFGHLTRQLMTLAGGRVVLALEGGHDLTAICDASEACVSALLSVELQPLDEAVLQQKPSVNAVATLEKVIEIQSKHWSCVQRFAAGLGCSLREAQTGEKEEAETVSAMALLSVGAEQAQAVATQEHSPR"
misc_feature 1055..1318
/gene="Hdac5"
/gene_synonym="HD5; Hdac4; mHDA1; mKIAA0600"
/note="Glutamine-rich N-terminal helical domain of various
Class IIa histone deacetylases (HDAC4, HDAC5 and HDCA9);
Region: ClassIIa_HDAC_Gln-rich-N; cl25407"
/db_xref="CDD:421006"
misc_feature order(1058..1063,1067..1072,1079..1081,1091..1093,
1100..1105,1112..1117,1121..1126,1133..1138,1142..1147,
1154..1162,1166..1174,1178..1183,1220..1225,1232..1240)
/gene="Hdac5"
/gene_synonym="HD5; Hdac4; mHDA1; mKIAA0600"
/note="tetramer interface [polypeptide binding]; other
site"
/db_xref="CDD:197400"
misc_feature order(1058..1063,1067..1072,1079..1081,1091..1093,
1100..1102,1112..1114,1121..1123,1133..1138,1142..1147,
1154..1159,1166..1168,1178..1180,1220..1222,1232..1234)
/gene="Hdac5"
/gene_synonym="HD5; Hdac4; mHDA1; mKIAA0600"
/note="dimer interface A, C [polypeptide binding]; other
site"
/db_xref="CDD:197400"
misc_feature order(1091..1093,1103..1105,1115..1117,1124..1126,
1136..1138,1145..1147,1157..1162,1169..1174,1181..1183)
/gene="Hdac5"
/gene_synonym="HD5; Hdac4; mHDA1; mKIAA0600"
/note="dimer interface A, D [polypeptide binding]; other
site"
/db_xref="CDD:197400"
misc_feature 2864..4123
/gene="Hdac5"
/gene_synonym="HD5; Hdac4; mHDA1; mKIAA0600"
/note="Histone deacetylase 5; Region: HDAC5; cd10007"
/db_xref="CDD:212531"
misc_feature order(3323..3328,3350..3355,3437..3439,3443..3445,
3719..3721,3839..3841)
/gene="Hdac5"
/gene_synonym="HD5; Hdac4; mHDA1; mKIAA0600"
/note="putative active site [active]"
/db_xref="CDD:212531"
exon 948..1207
/gene="Hdac5"
/gene_synonym="HD5; Hdac4; mHDA1; mKIAA0600"
/inference="alignment:Splign:2.1.0"
exon 1208..1352
/gene="Hdac5"
/gene_synonym="HD5; Hdac4; mHDA1; mKIAA0600"
/inference="alignment:Splign:2.1.0"
exon 1353..1467
/gene="Hdac5"
/gene_synonym="HD5; Hdac4; mHDA1; mKIAA0600"
/inference="alignment:Splign:2.1.0"
exon 1468..1598
/gene="Hdac5"
/gene_synonym="HD5; Hdac4; mHDA1; mKIAA0600"
/inference="alignment:Splign:2.1.0"
exon 1599..1745
/gene="Hdac5"
/gene_synonym="HD5; Hdac4; mHDA1; mKIAA0600"
/inference="alignment:Splign:2.1.0"
exon 1746..1858
/gene="Hdac5"
/gene_synonym="HD5; Hdac4; mHDA1; mKIAA0600"
/inference="alignment:Splign:2.1.0"
exon 1859..1990
/gene="Hdac5"
/gene_synonym="HD5; Hdac4; mHDA1; mKIAA0600"
/inference="alignment:Splign:2.1.0"
exon 1991..2213
/gene="Hdac5"
/gene_synonym="HD5; Hdac4; mHDA1; mKIAA0600"
/inference="alignment:Splign:2.1.0"
exon 2214..2425
/gene="Hdac5"
/gene_synonym="HD5; Hdac4; mHDA1; mKIAA0600"
/inference="alignment:Splign:2.1.0"
exon 2426..2707
/gene="Hdac5"
/gene_synonym="HD5; Hdac4; mHDA1; mKIAA0600"
/inference="alignment:Splign:2.1.0"
exon 2708..2879
/gene="Hdac5"
/gene_synonym="HD5; Hdac4; mHDA1; mKIAA0600"
/inference="alignment:Splign:2.1.0"
exon 2880..3013
/gene="Hdac5"
/gene_synonym="HD5; Hdac4; mHDA1; mKIAA0600"
/inference="alignment:Splign:2.1.0"
exon 3014..3134
/gene="Hdac5"
/gene_synonym="HD5; Hdac4; mHDA1; mKIAA0600"
/inference="alignment:Splign:2.1.0"
exon 3135..3184
/gene="Hdac5"
/gene_synonym="HD5; Hdac4; mHDA1; mKIAA0600"
/inference="alignment:Splign:2.1.0"
exon 3185..3292
/gene="Hdac5"
/gene_synonym="HD5; Hdac4; mHDA1; mKIAA0600"
/inference="alignment:Splign:2.1.0"
exon 3293..3348
/gene="Hdac5"
/gene_synonym="HD5; Hdac4; mHDA1; mKIAA0600"
/inference="alignment:Splign:2.1.0"
exon 3349..3436
/gene="Hdac5"
/gene_synonym="HD5; Hdac4; mHDA1; mKIAA0600"
/inference="alignment:Splign:2.1.0"
exon 3437..3556
/gene="Hdac5"
/gene_synonym="HD5; Hdac4; mHDA1; mKIAA0600"
/inference="alignment:Splign:2.1.0"
exon 3557..3654
/gene="Hdac5"
/gene_synonym="HD5; Hdac4; mHDA1; mKIAA0600"
/inference="alignment:Splign:2.1.0"
exon 3655..3773
/gene="Hdac5"
/gene_synonym="HD5; Hdac4; mHDA1; mKIAA0600"
/inference="alignment:Splign:2.1.0"
exon 3774..3907
/gene="Hdac5"
/gene_synonym="HD5; Hdac4; mHDA1; mKIAA0600"
/inference="alignment:Splign:2.1.0"
exon 3908..3992
/gene="Hdac5"
/gene_synonym="HD5; Hdac4; mHDA1; mKIAA0600"
/inference="alignment:Splign:2.1.0"
exon 3993..4162
/gene="Hdac5"
/gene_synonym="HD5; Hdac4; mHDA1; mKIAA0600"
/inference="alignment:Splign:2.1.0"
exon 4163..5613
/gene="Hdac5"
/gene_synonym="HD5; Hdac4; mHDA1; mKIAA0600"
/inference="alignment:Splign:2.1.0"
regulatory 4264..4269
/regulatory_class="polyA_signal_sequence"
/gene="Hdac5"
/gene_synonym="HD5; Hdac4; mHDA1; mKIAA0600"
/note="hexamer: AACAAA"
polyA_site 4284
/gene="Hdac5"
/gene_synonym="HD5; Hdac4; mHDA1; mKIAA0600"
/note="major polyA site"
regulatory 5581..5586
/regulatory_class="polyA_signal_sequence"
/gene="Hdac5"
/gene_synonym="HD5; Hdac4; mHDA1; mKIAA0600"
/note="hexamer: AATAAA"
polyA_site 5613
/gene="Hdac5"
/gene_synonym="HD5; Hdac4; mHDA1; mKIAA0600"
ORIGIN
gttgttgttggtggcggcggcgagcggagccggaggagccgccgcaaagatggaggagccgtcgaggaggcgctgccgctgctgttgccgccgctgctgccgccgccgcccgcgaagccggagctcgagccgcagcggggatgccgttctgagtgcctgactgcctcgccccgccccgaaggatggccttggatgggcattagaggcactgcggccctgggctcgggctcctgtcccgtccgtctgtctgttatcgtctgtctctcttgacatcacagcagctccgccccctcccgtcccagcccccaacgtcagcttcctgcaggcccagagccggcatgaactctcccaacgagtcggcttccttccagagggattggaggctcaggactggctggtgaggagaggcagtatcaacccagagaggaagtagaagatgacaaaaaagggggaagagagaagatccaggctggctgcttggtgtccagtccgttgtttgcccccagcagtggccaaagctgaccccagatgcatgggtcctctgcctgcacccttctctagtccagccactggccacccagactttggtccacgctcctggagcggagagcaggcccttcagcctcattagcctccctgcgtctgctgcctccggagcgcgcccaggccggatgaggtgcctccttgcctcgtgggtcccagcggcagtggcctgagggagtccttgagcagccagctggccccgctgaccaccttttccctcaccggcttccgcctcgggcggcccctccctggcatgctgctggtgcccaaggcacaggggcttgtggagatgctgcagaccatctatgagaccgagtcctgtttctcagcagatggcatgtcaggccgggaaccatccttggaaatcctgccacggactcctctgcacagcatccctgtggcagtggaggtgaagccggtgctgccaggagccatgcccagctccatggggggtggaggtggaggtagccccagccccgtggagcttcggggggctctggcgggccccatggaccctgcgctacgggagcagcaactgcagcaggagctcctggtcctcaagcagcagcagcagctccagaagcagctcctgttcgccgagttccagaagcagcacgaccacttgacgcggcagcacgaggtccagctgcagaagcacctcaagcagcagcaggagatgctggcggctaagaggcagcaggagctggagcagcagcggcagcgggagcagcagcggcaggaggagctggagaaacagcggctggagcagcagctgctcatcctgcgcaacaaggagaagagcaaagagagtgccatcgccagcaccgaggtaaagctgaggctccaggaattcctgttgtccaagtcaaaggagcccacgccaggcggcctcaaccattccctcccacagcaccccaaatgctggggagcccaccacgcttctttggaccagagttcccctccccagagcggccctcctgggacgcctccctcctacaaattgcctttgcttgggccctatgacagccgtgatgactttcccctccgtaaaacggcctcggaacccaacttaaaagtacgttcgaggctaaaacagaaggtagccgagaggagaagcagtcccctcctgcgtcgaaaggatggcactgttattagtacttttaagaagagagcagttgagatcaccggcacggggcctggggtgtcgtccgtgtgtaacagtgcgcccggctctggccccagctctcccaacagttcccacagcaccatcgctgagaacggctttactggctcagtccccaacatccccactgagatgatcccccagcaccgggccctccctctggacagttccccaaaccagttcagcctctatacgtctccttctctgcccaacatctccctagggctgcaggccactgtcactgtcaccaactcgcacctcaccgcctccccgaagctgtcaacacagcaggaggctgagaggcaggcccttcagtccctgcggcagggcggcacactgaccggcaagttcatgagcacatcctccatccctggctgcctgttgggagtggcactggagggtgacacaagcccccacgggcacgcttccctgctgcagcacgttttgctcctggagcaggcccggcaacagagcacgctcatagcagtgccgctccatgggcagtccccactggtgacgggtgaacgtgtggccaccagcatgaggacggtgggtaagctcccgaggcaccgacctctgagccgcactcagtcctccccgctgccgcagagtccccaggccctgcagcagctggtcatgcagcagcagcaccagcagttcctggagaagcagaagcagcagcagatgcagctgggcaagatccttaccaaaactggggagctgtcaaggcagcccaccactcacccggaggagacagaagaggagctgacggagcagcaggaggccttgctgggagagggggccctgaccattccccgggaaggctctacagaaagtgagagcacccaggaagacctagaagaggaggaggaggaggaggaggaggaagaggaggactgcattcaggtcaaggatgaggatggcgagagtggtcctgatgaaggccctgacttagaagagtccagtgctggttacaaaaagttgttcgcagatgcccagcagttacagcccctccaggtgtaccaggcacccctcagcctggccactgtgcctcatcaggccctgggccgcacccagtcctcacctgctgctcctgggagcatgaagagccccacagaccaacccactgtggtgaagcacctcttcaccacaggtgtggtctatgacacgttcatgctgaagcaccagtgtatgtgcggaaacacacacgtgcacccagagcacgccggccgcatccagagcatctggtcccggctgcaggaaactggtctgctcggcaagtgtgagcggatccggggtcgtaaagccacactggatgaaatccagaccgtgcactctgagtaccacaccctgctctatgggaccagcccccttaaccggcagaagctggacagcaagaagctgcttggccccatcagccagaagatgtacgccatgctgccctgtgggggcattggggtggacagtgacacggtgtggaatgagatgcactcctcaagtgccgtgcgaatggcagtgggctgcctggtggagctggccttcaaggtggctgcaggagagctcaagaatggatttgctatcatccggcccccaggacaccatgctgaggagtccacagccatgggattctgcttcttcaactccgtagccatcacagctaaactcctgcagcagaagctgagcgtgggcaaggtcctcatcgtggactgggatattcaccatggcaacggcacccagcaagcattctacaacgatccctctgtgctctacatctccctgcatcgctacgacaacgggaacttctttccaggctctggggctcctgaagaggttggtggagggccaggtgtggggtacaacgtaaatgtggcgtggacaggaggtgtggatccccccattggagatgtggaatacctgacagccttcaggacagtggtgatgcccattgcccaggagttctcacctgacgtcgtcctagtctccgctgggtttgatgctgttgaaggacatctgtctccactgggtggctattctgtcaccgccagatgttttggccacttgaccaggcagctcatgacactggctgggggccgggtggtgctggccctggagggaggccatgacttgaccgccatctgtgatgcctctgaggcctgtgtctcggctctgctcagcgtggagctgcagcccttggatgaagcagtcttgcagcaaaagcccagcgtcaatgcggttgccacactagagaaagtcatcgagatccagagcaaacactggagctgtgtacagaggtttgccgctggtctgggctgctcgctgcgggaggctcagacaggtgagaaagaggaggccgagactgtgagcgccatggccctgctttccgtgggggctgagcaggcccaggctgttgccactcaagagcacagccccaggtaagccagcagaggagcccatggagcaggagcctgccctgtgacaccctggcccccatccctctgggcttcatcattgtgattttgtttattttttctattaaaaacaaaaagtcacacattcaacaacgtgtgccgtgtgggtctctcagcctcgcccgcctccaagctgtttcagaaccccctcccactacaagggccctgggtcagctttcgaatccattccttctatggggcattgggtgcagtacccactttgcccatgttgtatcccatacccaattccccgtactcttctaccgtggacagtgctccaggcagtactgccaactctggagctgcctgagatgggaacagtgattggtgcctggacttcagttggcttttggggaatgccttaatttgaaatctgcccctctccaccctcaggatgatgtactaccatttaagatgcagaatcgagggaaggtaggcgtccaccccaaactttcccttcctctctatctccctcaccattctgcagactctcctctttggcctcagcactgaagactcgtgcccaggatgtaggccttagacttgtggccaggcttcttgtctcttactcctgagtatcccaggagctcaaagggtaccgggtggtgtgcagcggggttagaaggggccaggaggacctgcgtatgcaggcaggttctccactttttttctattaaactctccgtcttgtgctggaccagtataaggaggggagaaggtagaccctgcatgggggcttcaggttcatgcaagcccctctgatgttctgggccagattttctccatccatcagcctgctgcaagcagaagggtcaagatccagctcccttctggagcctttttgctttgaaacctggggatcgtgaaagacagggtagatatagttctagaatagacagggccagaaccctgtctagaagccacccctgtcccccagaggtgttgggggggggggagtccagctctcagcaggaggttgttaggagctatccatcttttccagtagccttgtgtccagaggctggagcccacagacttccagtgaatgtggtctagcctgtaggaaaccaaagatgggaaatggctcctaaggggccaatttttcttcccctataccacatccccagggctcagctatctgtttccatattgtccgtatggggcctgagcagggctgagggagctggggagtcccaccactattagttttctgtgtgtttgcgtgctgtctgtatcatccttgcactgaaccagaggctgctcacctcccactctctccccgtaggctgatcttatcctgtgccaacccactcctgctttgtctccctggacatggattttagttcagtagtttgtatcccaacacatggtttttgtcttcgtgtaaataaacttatttgtggcagtgctttctgggaa
//
by
@meso_cacase at
DBCLS
This page is licensed under a
Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
[Full Text]