2024-09-28 11:20:31, GGRNA.v2 : RefSeq release 225 (Jul, 2024)
LOCUS NM_001142750 1032 bp mRNA linear ROD 07-AUG-2023 DEFINITION Mus musculus TGFB-induced factor homeobox 2-like, X-linked 2 (Tgif2lx2), mRNA. ACCESSION NM_001142750 XM_001472895 VERSION NM_001142750.1 KEYWORDS RefSeq; RefSeq Select. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 1032) AUTHORS Lai YL, Li H, Chiang HS and Hsieh-Li HM. TITLE Expression of a novel TGIF subclass homeobox gene, Tex1, in the spermatids of mouse testis during spermatogenesis JOURNAL Mech Dev 113 (2), 185-187 (2002) PUBMED 11960710 COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from AC123953.4. On Dec 19, 2008 this sequence version replaced XM_001472895.1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments. ##Evidence-Data-START## Transcript is intronless :: SRR5189673.76916.1, SRR5189670.166940.1 [ECO:0000345] ##Evidence-Data-END## ##RefSeq-Attributes-START## RefSeq Select criteria :: based on single protein-coding transcript ##RefSeq-Attributes-END## PRIMARY REFSEQ_SPAN PRIMARY_IDENTIFIER PRIMARY_SPAN COMP 1-1032 AC123953.4 89572-90603 FEATURES Location/Qualifiers source 1..1032 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6" /db_xref="taxon:10090" /chromosome="X" /map="X 49.58 cM" gene 1..1032 /gene="Tgif2lx2" /note="TGFB-induced factor homeobox 2-like, X-linked 2" /db_xref="GeneID:100039551" /db_xref="MGI:MGI:3800824" exon 1..1032 /gene="Tgif2lx2" /inference="alignment:Splign:2.1.0" CDS 116..811 /gene="Tgif2lx2" /codon_start=1 /product="TGFB-induced factor homeobox 2-like, X-linked 2" /protein_id="NP_001136222.1" /db_xref="CCDS:CCDS53177.1" /db_xref="GeneID:100039551" /db_xref="MGI:MGI:3800824" /translation="
MEEAEGSPEETQDFMKYYSSFGIRLERTCKMKFHDSRELPRGNMLPLKSVKILRDWLCEHQFNAYPTVADKRMLSKNTDLSYLQVSNWFVNIRKHLRWEIRYKPYSLSHEGQAANAAQKQHSNPSEEVKTQFNENADMQDLPLPIRQDSEEKVPYLESSPNQKVIAEDNIEKEEKISITEPWSSPEVAWPEEKPDFSSFYMLVDVAVQKAKEMEEQKKQNPNPQGPQQQFM"
misc_feature 290..397 /gene="Tgif2lx2" /note="Homeobox KN domain; Region: Homeobox_KN; pfam05920" /db_xref="CDD:428673" ORIGIN
agatgagaatccaattcagacagcagtgaaagtcttccctgactctctctgggcagctttagtcctacttcgttcatccctggtttctaagccactgaaagcagtcttccagaacatggaggaggctgaaggtagtccggaagaaacccaggactttatgaaatactacagctctttcgggataagacttgagagaacctgtaagatgaagtttcatgacagtcgggagcttccgagaggaaacatgttgccattgaagtctgtgaagatcctccgtgactggctctgtgagcaccagtttaacgcctaccctactgtagcagacaaacgaatgctgtccaagaataccgatttatcttacctgcaggtatccaactggtttgtaaatatccgcaaacaccttcgctgggaaattcgttacaaaccatacagcttgagtcacgaaggccaggctgccaatgcagcccagaagcagcactccaatccatccgaggaggtcaagacacagtttaacgaaaacgccgatatgcaggatctgcccctgccaatacgtcaagattccgaagagaaagtgccatatctggagtcttctccaaaccagaaggttatcgctgaagacaacatagagaaagaagagaagatttcaatcactgagccttggtcttctcctgaagttgcatggccagaggaaaagcctgattttagcagcttctacatgttggttgatgttgctgtacagaaggcaaaagaaatggaggagcagaagaagcaaaaccccaacccacagggtccccaacaacagttcatgtagccagttctttgaactctgggaggttcatttatactcaacctgattagcttgtaatgccgtcttctgctccatattattctcctttagaagtcttttccatcaatgttttctgaagaaagttactatccatgatattcaactttaacaaattgctaactttattctcctcccctggactttagccctatatatttattattaaacatcatgcaagctacaga
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Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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