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2024-09-28 11:16:36, GGRNA.v2 : RefSeq release 225 (Jul, 2024)

LOCUS       NM_001109910            3006 bp    mRNA    linear   ROD 02-JUN-2024
DEFINITION  Mus musculus serrate RNA effector molecule homolog (Arabidopsis)
            (Srrt), transcript variant 3, mRNA.
ACCESSION   NM_001109910
VERSION     NM_001109910.1
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 3006)
  AUTHORS   O'Sullivan,C., Nickerson,P.E.B., Krupke,O., Christie,J., Chen,L.L.,
            Mesa-Peres,M., Zhu,M., Ryan,B., Chow,R.L. and Howard,P.L.
  TITLE     ARS2 is required for retinal progenitor cell S-phase progression
            and Muller glial cell fate specification
  JOURNAL   Biochem Cell Biol 98 (1), 50-60 (2020)
   PUBMED   30673303
  REMARK    GeneRIF: The Arsenic-resistance protein 2 (ARS2, also known as
            SRRT) is a component of the nuclear cap-binding complex involved in
            RNA Polymerase II transcription, and is required for cell cycle
            progression.
REFERENCE   2  (bases 1 to 3006)
  AUTHORS   Yu,Y., Andreu-Agullo,C., Liu,B.F., Barboza,L., Toth,M. and Lai,E.C.
  TITLE     Regulation of embryonic and adult neurogenesis by Ars2
  JOURNAL   Development 147 (2) (2020)
   PUBMED   31969356
  REMARK    GeneRIF: Ars2 is an essential neural regulator that interacts
            dynamically with DNA and controls neural lineage development.
            Publication Status: Online-Only
REFERENCE   3  (bases 1 to 3006)
  AUTHORS   Choo,H.J., Cutler,A., Rother,F., Bader,M. and Pavlath,G.K.
  TITLE     Karyopherin Alpha 1 Regulates Satellite Cell Proliferation and
            Survival by Modulating Nuclear Import
  JOURNAL   Stem Cells 34 (11), 2784-2797 (2016)
   PUBMED   27434733
REFERENCE   4  (bases 1 to 3006)
  AUTHORS   O'Sullivan,C., Christie,J., Pienaar,M., Gambling,J.,
            Nickerson,P.E., Alford,S.C., Chow,R.L. and Howard,P.L.
  TITLE     Mutagenesis of ARS2 Domains To Assess Possible Roles in Cell Cycle
            Progression and MicroRNA and Replication-Dependent Histone mRNA
            Biogenesis
  JOURNAL   Mol Cell Biol 35 (21), 3753-3767 (2015)
   PUBMED   26303529
  REMARK    GeneRIF: ARS2 plays a central role in RNA recognition and
            processing through multiple protein and RNA interactions.
REFERENCE   5  (bases 1 to 3006)
  AUTHORS   Olejniczak,S.H., La Rocca,G., Gruber,J.J. and Thompson,C.B.
  TITLE     Long-lived microRNA-Argonaute complexes in quiescent cells can be
            activated to regulate mitogenic responses
  JOURNAL   Proc Natl Acad Sci U S A 110 (1), 157-162 (2013)
   PUBMED   23248281
REFERENCE   6  (bases 1 to 3006)
  AUTHORS   Andreu-Agullo,C., Maurin,T., Thompson,C.B. and Lai,E.C.
  TITLE     Ars2 maintains neural stem-cell identity through direct
            transcriptional activation of Sox2
  JOURNAL   Nature 481 (7380), 195-198 (2011)
   PUBMED   22198669
  REMARK    GeneRIF: findings reveal Ars2 as a new transcription factor that
            controls the multipotent progenitor state of NSCs through direct
            activation of the pluripotency factor Sox2
            Publication Status: Online-Only
REFERENCE   7  (bases 1 to 3006)
  AUTHORS   Gruber,J.J., Zatechka,D.S., Sabin,L.R., Yong,J., Lum,J.J., Kong,M.,
            Zong,W.X., Zhang,Z., Lau,C.K., Rawlings,J., Cherry,S., Ihle,J.N.,
            Dreyfuss,G. and Thompson,C.B.
  TITLE     Ars2 links the nuclear cap-binding complex to RNA interference and
            cell proliferation
  JOURNAL   Cell 138 (2), 328-339 (2009)
   PUBMED   19632182
  REMARK    GeneRIF: These findings provide evidence for a role for Ars2 in RNA
            interference regulation during cell proliferation.
REFERENCE   8  (bases 1 to 3006)
  AUTHORS   Wilson,M.D., Wang,D., Wagner,R., Breyssens,H., Gertsenstein,M.,
            Lobe,C., Lu,X., Nagy,A., Burke,R.D., Koop,B.F. and Howard,P.L.
  TITLE     ARS2 is a conserved eukaryotic gene essential for early mammalian
            development
  JOURNAL   Mol Cell Biol 28 (5), 1503-1514 (2008)
   PUBMED   18086880
  REMARK    GeneRIF: These data indicate ARS2 is essential for early mammalian
            development and is likely involved in an essential cellular
            process.
REFERENCE   9  (bases 1 to 3006)
  AUTHORS   Stryke,D., Kawamoto,M., Huang,C.C., Johns,S.J., King,L.A.,
            Harper,C.A., Meng,E.C., Lee,R.E., Yee,A., L'Italien,L.,
            Chuang,P.T., Young,S.G., Skarnes,W.C., Babbitt,P.C. and Ferrin,T.E.
  TITLE     BayGenomics: a resource of insertional mutations in mouse embryonic
            stem cells
  JOURNAL   Nucleic Acids Res 31 (1), 278-281 (2003)
   PUBMED   12520002
REFERENCE   10 (bases 1 to 3006)
  AUTHORS   Wilson,M.D., Riemer,C., Martindale,D.W., Schnupf,P., Boright,A.P.,
            Cheung,T.L., Hardy,D.M., Schwartz,S., Scherer,S.W., Tsui,L.C.,
            Miller,W. and Koop,B.F.
  TITLE     Comparative analysis of the gene-dense ACHE/TFR2 region on human
            chromosome 7q22 with the orthologous region on mouse chromosome 5
  JOURNAL   Nucleic Acids Res 29 (6), 1352-1365 (2001)
   PUBMED   11239002
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            CJ175065.1, BC066831.1, AK152710.1 and AA986426.1.
            
            Transcript Variant: This variant (3) uses different acceptor splice
            sites at the second and third to last exons compared to transcript
            variant 1, resulting in a shorter isoform (3) compared to isoform
            1.
            
            Publication Note:  This RefSeq record includes a subset of the
            publications that are available for this gene. Please see the Gene
            record to access additional publications.
            
            ##Evidence-Data-START##
            RNAseq introns :: single sample supports all introns SAMN01164137,
                              SAMN01164138 [ECO:0000348]
            ##Evidence-Data-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-400               CJ175065.1         1-400
            401-2592            BC066831.1         360-2551
            2593-2930           AK152710.1         899-1236
            2931-2980           BC066831.1         2902-2951
            2981-3006           AA986426.1         20-45               c
FEATURES             Location/Qualifiers
     source          1..3006
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="5"
                     /map="5 76.33 cM"
     gene            1..3006
                     /gene="Srrt"
                     /gene_synonym="2810019G02Rik; Ars2; Asr2; ASR2A; ASR2B;
                     ASR2C; ASR2D"
                     /note="serrate RNA effector molecule homolog
                     (Arabidopsis)"
                     /db_xref="GeneID:83701"
                     /db_xref="MGI:MGI:1933527"
     exon            1..251
                     /gene="Srrt"
                     /gene_synonym="2810019G02Rik; Ars2; Asr2; ASR2A; ASR2B;
                     ASR2C; ASR2D"
                     /inference="alignment:Splign:2.1.0"
     misc_feature    138..140
                     /gene="Srrt"
                     /gene_synonym="2810019G02Rik; Ars2; Asr2; ASR2A; ASR2B;
                     ASR2C; ASR2D"
                     /note="upstream in-frame stop codon"
     exon            252..391
                     /gene="Srrt"
                     /gene_synonym="2810019G02Rik; Ars2; Asr2; ASR2A; ASR2B;
                     ASR2C; ASR2D"
                     /inference="alignment:Splign:2.1.0"
     CDS             270..2864
                     /gene="Srrt"
                     /gene_synonym="2810019G02Rik; Ars2; Asr2; ASR2A; ASR2B;
                     ASR2C; ASR2D"
                     /note="isoform 3 is encoded by transcript variant 3;
                     arsenate resistance protein 2; arsenite-resistance protein
                     2"
                     /codon_start=1
                     /product="serrate RNA effector molecule homolog isoform 3"
                     /protein_id="NP_001103380.1"
                     /db_xref="CCDS:CCDS80439.1"
                     /db_xref="GeneID:83701"
                     /db_xref="MGI:MGI:1933527"
                     /translation="
MGDSDDEYDRRRRDKFRRERSDYDRSRERDERRRGDDWNDREWDRGRERRSRGEYRDYDRNRRERFSPPRHELSPPQKRMRRDWDEHSSDPYHSGYDMPYAGGGGGPTYGPPQPWGHPDVHIMQHHVLPIQARLGSIAEIDLGVPPPIMKSFKEFLLSLDDSVDETEAVKRYNDYKLDFRRQQMQDFFLAHKDEEWFRSKYHPDEVGKRRQEARGALQNRLKVFLSLMESGWFDNLLLDIDKADAIVKMLDAAVIKMEGGTENDLRILEQEEEEEQAGKTGEASKKEEARAGPALGEGERKANDKDEKKEDGKQAENDSSNDDKTKKSEGDGDKEEKKEEAEKEAKKSKKRNRKQSGDDSFDEGSVSESESESEGGQAEEEKEEAEEALKEKEKPKEEEKEKPKDAAGLECKPRPLHKTCSLFMRNIAPNISRAEIISLCKRYPGFMRVALSEPQPERRFFRRGWVTFDRSVNIKEICWNLQNIRLRECELSPGVNRDLTRRVRNINGITQHKQIVRNDIKLAAKLIHTLDDRTQLWASEPGTPPVPTSLPSQNPILKNITDYLIEEVSAEEEELLGSSGGPPPEEPPKEGNPAEINVERDEKLIKVLDKLLLYLRIVHSLDYYNTCEYPNEDEMPNRCGIIHVRGPMPPNRISHGEVLEWQKTFEEKLTPLLSVRESLSEEEAQKMGRKDPEQEVEKFVTSNTQELGKDKWLCPLSGKKFKGPEFVRKHIFNKHAEKIEEVKKEVAFFNNFLTDAKRPALPEIKPAQPPGPAQSLTPGLPYPHQTPQGLMPYGQPRPPILGYGVPTGGPPYPHAPYGAGRGNYDAFRGQGGYPGKPRNRMVRGDPRAIVEYRDLDAPDDVDFF"
     misc_feature    270..539
                     /gene="Srrt"
                     /gene_synonym="2810019G02Rik; Ars2; Asr2; ASR2A; ASR2B;
                     ASR2C; ASR2D"
                     /note="propagated from UniProtKB/Swiss-Prot (Q99MR6.1);
                     Region: Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite"
     misc_feature    273..275
                     /gene="Srrt"
                     /gene_synonym="2810019G02Rik; Ars2; Asr2; ASR2A; ASR2B;
                     ASR2C; ASR2D"
                     /note="N-acetylglycine.
                     /evidence=ECO:0000250|UniProtKB:Q9BXP5; propagated from
                     UniProtKB/Swiss-Prot (Q99MR6.1); acetylation site"
     misc_feature    279..281
                     /gene="Srrt"
                     /gene_synonym="2810019G02Rik; Ars2; Asr2; ASR2A; ASR2B;
                     ASR2C; ASR2D"
                     /note="Phosphoserine.
                     /evidence=ECO:0000250|UniProtKB:Q9BXP5; propagated from
                     UniProtKB/Swiss-Prot (Q99MR6.1); phosphorylation site"
     misc_feature    291..293
                     /gene="Srrt"
                     /gene_synonym="2810019G02Rik; Ars2; Asr2; ASR2A; ASR2B;
                     ASR2C; ASR2D"
                     /note="Phosphotyrosine.
                     /evidence=ECO:0000250|UniProtKB:Q9BXP5; propagated from
                     UniProtKB/Swiss-Prot (Q99MR6.1); phosphorylation site"
     misc_feature    468..470
                     /gene="Srrt"
                     /gene_synonym="2810019G02Rik; Ars2; Asr2; ASR2A; ASR2B;
                     ASR2C; ASR2D"
                     /note="Phosphoserine.
                     /evidence=ECO:0000250|UniProtKB:Q9BXP5; propagated from
                     UniProtKB/Swiss-Prot (Q99MR6.1); phosphorylation site"
     misc_feature    489..491
                     /gene="Srrt"
                     /gene_synonym="2810019G02Rik; Ars2; Asr2; ASR2A; ASR2B;
                     ASR2C; ASR2D"
                     /note="Phosphoserine.
                     /evidence=ECO:0000250|UniProtKB:Q9BXP5; propagated from
                     UniProtKB/Swiss-Prot (Q99MR6.1); phosphorylation site"
     misc_feature    675..677
                     /gene="Srrt"
                     /gene_synonym="2810019G02Rik; Ars2; Asr2; ASR2A; ASR2B;
                     ASR2C; ASR2D"
                     /note="Phosphoserine.
                     /evidence=ECO:0000250|UniProtKB:Q9BXP5; propagated from
                     UniProtKB/Swiss-Prot (Q99MR6.1); phosphorylation site"
     misc_feature    726..1055
                     /gene="Srrt"
                     /gene_synonym="2810019G02Rik; Ars2; Asr2; ASR2A; ASR2B;
                     ASR2C; ASR2D"
                     /note="SERRATE/Ars2, N-terminal domain; Region:
                     SERRATE_Ars2_N; pfam12066"
                     /db_xref="CDD:463453"
     misc_feature    1083..1502
                     /gene="Srrt"
                     /gene_synonym="2810019G02Rik; Ars2; Asr2; ASR2A; ASR2B;
                     ASR2C; ASR2D"
                     /note="propagated from UniProtKB/Swiss-Prot (Q99MR6.1);
                     Region: Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite"
     misc_feature    1743..1745
                     /gene="Srrt"
                     /gene_synonym="2810019G02Rik; Ars2; Asr2; ASR2A; ASR2B;
                     ASR2C; ASR2D"
                     /note="Phosphoserine.
                     /evidence=ECO:0000250|UniProtKB:Q9BXP5; propagated from
                     UniProtKB/Swiss-Prot (Q99MR6.1); phosphorylation site"
     misc_feature    1884..1886
                     /gene="Srrt"
                     /gene_synonym="2810019G02Rik; Ars2; Asr2; ASR2A; ASR2B;
                     ASR2C; ASR2D"
                     /note="Phosphoserine.
                     /evidence=ECO:0000250|UniProtKB:Q9BXP5; propagated from
                     UniProtKB/Swiss-Prot (Q99MR6.1); phosphorylation site"
     misc_feature    1896..1898
                     /gene="Srrt"
                     /gene_synonym="2810019G02Rik; Ars2; Asr2; ASR2A; ASR2B;
                     ASR2C; ASR2D"
                     /note="Phosphothreonine.
                     /evidence=ECO:0007744|PubMed:15345747,
                     ECO:0007744|PubMed:19131326, ECO:0007744|PubMed:21183079;
                     propagated from UniProtKB/Swiss-Prot (Q99MR6.1);
                     phosphorylation site"
     misc_feature    1974..1976
                     /gene="Srrt"
                     /gene_synonym="2810019G02Rik; Ars2; Asr2; ASR2A; ASR2B;
                     ASR2C; ASR2D"
                     /note="Phosphoserine.
                     /evidence=ECO:0000250|UniProtKB:Q9BXP5; propagated from
                     UniProtKB/Swiss-Prot (Q99MR6.1); phosphorylation site"
     misc_feature    1980..2060
                     /gene="Srrt"
                     /gene_synonym="2810019G02Rik; Ars2; Asr2; ASR2A; ASR2B;
                     ASR2C; ASR2D"
                     /note="propagated from UniProtKB/Swiss-Prot (Q99MR6.1);
                     Region: Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite"
     misc_feature    2202..2786
                     /gene="Srrt"
                     /gene_synonym="2810019G02Rik; Ars2; Asr2; ASR2A; ASR2B;
                     ASR2C; ASR2D"
                     /note="Arsenite-resistance protein 2; Region: ARS2;
                     pfam04959"
                     /db_xref="CDD:461498"
     misc_feature    2277..2279
                     /gene="Srrt"
                     /gene_synonym="2810019G02Rik; Ars2; Asr2; ASR2A; ASR2B;
                     ASR2C; ASR2D"
                     /note="Phosphothreonine.
                     /evidence=ECO:0000250|UniProtKB:Q9BXP5; propagated from
                     UniProtKB/Swiss-Prot (Q99MR6.1); phosphorylation site"
     misc_feature    2301..2303
                     /gene="Srrt"
                     /gene_synonym="2810019G02Rik; Ars2; Asr2; ASR2A; ASR2B;
                     ASR2C; ASR2D"
                     /note="Phosphoserine.
                     /evidence=ECO:0000250|UniProtKB:Q9BXP5; propagated from
                     UniProtKB/Swiss-Prot (Q99MR6.1); phosphorylation site"
     misc_feature    2730..2732
                     /gene="Srrt"
                     /gene_synonym="2810019G02Rik; Ars2; Asr2; ASR2A; ASR2B;
                     ASR2C; ASR2D"
                     /note="Omega-N-methylarginine.
                     /evidence=ECO:0000250|UniProtKB:Q9BXP5; propagated from
                     UniProtKB/Swiss-Prot (Q99MR6.1); methylation site"
     misc_feature    2736..2795
                     /gene="Srrt"
                     /gene_synonym="2810019G02Rik; Ars2; Asr2; ASR2A; ASR2B;
                     ASR2C; ASR2D"
                     /note="propagated from UniProtKB/Swiss-Prot (Q99MR6.1);
                     Region: Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite"
     misc_feature    2751..2753
                     /gene="Srrt"
                     /gene_synonym="2810019G02Rik; Ars2; Asr2; ASR2A; ASR2B;
                     ASR2C; ASR2D"
                     /note="Omega-N-methylarginine.
                     /evidence=ECO:0000250|UniProtKB:Q9BXP5; propagated from
                     UniProtKB/Swiss-Prot (Q99MR6.1); methylation site"
     misc_feature    2781..2783
                     /gene="Srrt"
                     /gene_synonym="2810019G02Rik; Ars2; Asr2; ASR2A; ASR2B;
                     ASR2C; ASR2D"
                     /note="Omega-N-methylarginine.
                     /evidence=ECO:0000250|UniProtKB:Q9BXP5; propagated from
                     UniProtKB/Swiss-Prot (Q99MR6.1); methylation site"
     exon            392..520
                     /gene="Srrt"
                     /gene_synonym="2810019G02Rik; Ars2; Asr2; ASR2A; ASR2B;
                     ASR2C; ASR2D"
                     /inference="alignment:Splign:2.1.0"
     exon            521..667
                     /gene="Srrt"
                     /gene_synonym="2810019G02Rik; Ars2; Asr2; ASR2A; ASR2B;
                     ASR2C; ASR2D"
                     /inference="alignment:Splign:2.1.0"
     exon            668..856
                     /gene="Srrt"
                     /gene_synonym="2810019G02Rik; Ars2; Asr2; ASR2A; ASR2B;
                     ASR2C; ASR2D"
                     /inference="alignment:Splign:2.1.0"
     exon            857..1026
                     /gene="Srrt"
                     /gene_synonym="2810019G02Rik; Ars2; Asr2; ASR2A; ASR2B;
                     ASR2C; ASR2D"
                     /inference="alignment:Splign:2.1.0"
     exon            1027..1211
                     /gene="Srrt"
                     /gene_synonym="2810019G02Rik; Ars2; Asr2; ASR2A; ASR2B;
                     ASR2C; ASR2D"
                     /inference="alignment:Splign:2.1.0"
     exon            1212..1310
                     /gene="Srrt"
                     /gene_synonym="2810019G02Rik; Ars2; Asr2; ASR2A; ASR2B;
                     ASR2C; ASR2D"
                     /inference="alignment:Splign:2.1.0"
     exon            1311..1425
                     /gene="Srrt"
                     /gene_synonym="2810019G02Rik; Ars2; Asr2; ASR2A; ASR2B;
                     ASR2C; ASR2D"
                     /inference="alignment:Splign:2.1.0"
     exon            1426..1583
                     /gene="Srrt"
                     /gene_synonym="2810019G02Rik; Ars2; Asr2; ASR2A; ASR2B;
                     ASR2C; ASR2D"
                     /inference="alignment:Splign:2.1.0"
     exon            1584..1645
                     /gene="Srrt"
                     /gene_synonym="2810019G02Rik; Ars2; Asr2; ASR2A; ASR2B;
                     ASR2C; ASR2D"
                     /inference="alignment:Splign:2.1.0"
     exon            1646..1724
                     /gene="Srrt"
                     /gene_synonym="2810019G02Rik; Ars2; Asr2; ASR2A; ASR2B;
                     ASR2C; ASR2D"
                     /inference="alignment:Splign:2.1.0"
     exon            1725..1913
                     /gene="Srrt"
                     /gene_synonym="2810019G02Rik; Ars2; Asr2; ASR2A; ASR2B;
                     ASR2C; ASR2D"
                     /inference="alignment:Splign:2.1.0"
     exon            1914..2087
                     /gene="Srrt"
                     /gene_synonym="2810019G02Rik; Ars2; Asr2; ASR2A; ASR2B;
                     ASR2C; ASR2D"
                     /inference="alignment:Splign:2.1.0"
     exon            2088..2241
                     /gene="Srrt"
                     /gene_synonym="2810019G02Rik; Ars2; Asr2; ASR2A; ASR2B;
                     ASR2C; ASR2D"
                     /inference="alignment:Splign:2.1.0"
     exon            2242..2435
                     /gene="Srrt"
                     /gene_synonym="2810019G02Rik; Ars2; Asr2; ASR2A; ASR2B;
                     ASR2C; ASR2D"
                     /inference="alignment:Splign:2.1.0"
     exon            2436..2592
                     /gene="Srrt"
                     /gene_synonym="2810019G02Rik; Ars2; Asr2; ASR2A; ASR2B;
                     ASR2C; ASR2D"
                     /inference="alignment:Splign:2.1.0"
     exon            2593..2682
                     /gene="Srrt"
                     /gene_synonym="2810019G02Rik; Ars2; Asr2; ASR2A; ASR2B;
                     ASR2C; ASR2D"
                     /inference="alignment:Splign:2.1.0"
     exon            2683..2788
                     /gene="Srrt"
                     /gene_synonym="2810019G02Rik; Ars2; Asr2; ASR2A; ASR2B;
                     ASR2C; ASR2D"
                     /inference="alignment:Splign:2.1.0"
     exon            2789..2991
                     /gene="Srrt"
                     /gene_synonym="2810019G02Rik; Ars2; Asr2; ASR2A; ASR2B;
                     ASR2C; ASR2D"
                     /inference="alignment:Splign:2.1.0"
     regulatory      2958..2963
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Srrt"
                     /gene_synonym="2810019G02Rik; Ars2; Asr2; ASR2A; ASR2B;
                     ASR2C; ASR2D"
                     /note="hexamer: AGTAAA"
     polyA_site      2986
                     /gene="Srrt"
                     /gene_synonym="2810019G02Rik; Ars2; Asr2; ASR2A; ASR2B;
                     ASR2C; ASR2D"
                     /note="major polyA site"
ORIGIN      
ggagttttagtttggtccgggggtcttgttttgtagttggaggccgagctccgggagtgacgtaggacgcgcgcgcgcctccttgccccccccccccccccgcggtcccgctcttctcttccccttcgtctccgggctgagaatcccagcgtctccttccaaccctctttgtggtccattgtcgctcgttccggtccgcccggaaaacaagcccgccggcgcgcgcttccaacggccccgaccgctgccaggcctcctctgacagcaccatgggtgacagtgatgatgaatacgaccgaagacgcagggacaaatttcgaagagagcgcagcgattatgaccgttcccgggaaagggatgaaagacggcgaggggacgattggaatgaccgagagtgggaccgtggccgggagcgccgcagtcggggtgaatatcgagactacgacaggaaccgaagggagcgcttctctccccctcgacacgaactaagccccccccagaagcgcatgcggagagactgggatgagcacagctctgacccataccacagtggctatgacatgccctatgctggggggggtgggggaccaacttacggcccccctcagccctggggccacccagacgtccacatcatgcagcaccatgtcctgcccatccaggccaggctgggcagcatcgcagagattgacttgggggtgccaccgcccataatgaagtccttcaaagagttcctcctgtctctggatgactctgtggatgagacagaggcagttaaacgctacaatgactacaagctggacttccgaaggcagcagatgcaggactttttcctggctcacaaagacgaggagtggttccgatctaagtaccaccctgatgaggtgggaaagcgtcggcaggaggcccggggggccctgcagaaccggctgaaggtgttcctgtccctcatggagagtggctggtttgataaccttctcttggacatagacaaagctgatgccattgtcaagatgctagatgcagctgtcattaagatggaaggtggcacagagaacgatctccgaattttggagcaggaggaggaggaggaacaggcaggcaagactggggaggccagcaagaaagaggaggcccgtgctggaccagccctgggagaaggagagcgcaaagccaatgataaggatgagaagaaagaagatggaaaacaggctgagaatgacagttccaacgatgacaaaactaaaaaatctgagggtgatggggacaaggaggagaagaaagaagaggctgagaaggaagccaaaaagagcaagaagcggaacaggaagcagagtggcgatgacagcttcgatgagggcagtgtgtccgagtctgagtccgagtctgagggtggccaggccgaggaggagaaggaggaggccgaagaagcacttaaagaaaaggagaagcccaaagaggaggagaaggagaagcctaaggatgctgcagggttggagtgtaagccccggcccttgcataagacttgctctctcttcatgcgcaacatcgcacccaacatttcaagggcagagatcatttctctttgtaaacgatacccaggctttatgcgagtggcactgtcagagccccagccagagaggaggttttttcgccgtggctgggtgacttttgaccgcagtgttaacattaaggagatctgttggaacctgcagaacattcggctccgggagtgtgaactgagtcccggtgtgaacagagacctgacccgtcgtgtccgcaacataaatggcattacacagcacaagcagatagtgcgcaatgacatcaagttggcagccaagctaatccacacactggatgacaggacccagctctgggcctctgagcctgggacgcctcctgtgcccacaagcctcccctcgcaaaaccccatcctgaagaacatcactgactacctgattgaggaagtgagtgcggaggaggaggagcttctggggagcagtgggggaccccctcctgaggagcctcccaaggagggcaacccagccgagatcaacgtggagagagatgagaagctgatcaaggtcttggataaacttcttctctatttgcgtattgtgcattctctggattattataacacctgtgagtaccctaatgaagacgagatgcccaaccgctgtggcataatccacgttcgggggcccatgcctcccaaccgaattagtcacggagaagtgctggagtggcagaagacatttgaggagaaactgactccactgttgagtgtgcgtgaatccctttctgaggaagaggcccagaagatgggtcgaaaagacccagagcaggaagtggagaagtttgtcacctccaacacgcaggaactgggcaaggataagtggctatgtcctctcagtggcaagaaattcaagggcccggagtttgtgcgcaagcatatcttcaataagcatgccgagaagatcgaggaggtgaagaaggaggtggcgttcttcaataactttctcacagacgccaagcgcccagctttgcctgagatcaagccagctcagccacctggccctgcccagagcctgaccccaggacttccctacccacatcagacgccacagggcttgatgccatatggtcagccccggcctcccatcttgggctatggagtcccaacaggagggcctccatacccccatgctccatatggtgccggccgtgggaactatgatgcttttcgaggccaaggcggttatcctgggaaacctcggaacaggatggttcgaggagacccaagggccatagtggagtatcgggacctggatgccccggatgatgttgacttcttttgagccatccatgtcccctcctgcattgctacatcagtacccgtgaccactttatcccatcagctgaaaagttttttgtacgttattttacccgctagtaaaaacactttggtagtgtgtgttaactgtgaaaaaaaaaaaaaaa
//

by @meso_cacase at DBCLS
This page is licensed under a Creative Commons Attribution 4.0 International License (CC BY 4.0).

If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596. [Full Text]