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2024-09-28 11:20:37, GGRNA.v2 : RefSeq release 225 (Jul, 2024)

LOCUS       NM_001101452             882 bp    mRNA    linear   ROD 04-AUG-2023
DEFINITION  Mus musculus sulfotransferase family 3A, member 2 (Sult3a2), mRNA.
ACCESSION   NM_001101452 XM_137040 XM_906742
VERSION     NM_001101452.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 882)
  AUTHORS   French JE, Gatti DM, Morgan DL, Kissling GE, Shockley KR, Knudsen
            GA, Shepard KG, Price HC, King D, Witt KL, Pedersen LC, Munger SC,
            Svenson KL and Churchill GA.
  TITLE     Diversity Outbred Mice Identify Population-Based Exposure
            Thresholds and Genetic Factors that Influence Benzene-Induced
            Genotoxicity
  JOURNAL   Environ Health Perspect 123 (3), 237-245 (2015)
   PUBMED   25376053
  REMARK    Erratum:[Environ Health Perspect. 2018 Jun 27;126(6):069003. PMID:
            29957589]
REFERENCE   2  (bases 1 to 882)
  AUTHORS   Takahashi S, Sakakibara Y, Mishiro E, Kouriki H, Nobe R, Kurogi K,
            Yasuda S, Liu MC and Suiko M.
  TITLE     Molecular cloning, expression, and characterization of mouse amine
            N-sulfotransferases
  JOURNAL   Biochem Biophys Res Commun 375 (4), 531-535 (2008)
   PUBMED   18725199
  REMARK    GeneRIF: These results imply that these two amine-sulfonating
            SULT3s may play essential roles in the metabolism and
            detoxification of aromatic amine compounds in the body.(SULT3A2)
COMMENT     PREDICTED REFSEQ: This record has not been reviewed and the
            function is unknown. The reference sequence was derived from
            AC107864.11.
            
            On or before Feb 22, 2008 this sequence version replaced
            XM_906742.1, XM_137040.1.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-142               AC107864.11        61944-62085
            143-351             AC107864.11        64220-64428
            352-478             AC107864.11        65756-65882
            479-573             AC107864.11        66795-66889
            574-760             AC107864.11        75702-75888
            761-882             AC107864.11        77514-77635
FEATURES             Location/Qualifiers
     source          1..882
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10090"
                     /chromosome="10"
                     /map="10 18.76 cM"
     gene            1..882
                     /gene="Sult3a2"
                     /gene_synonym="EG215895; Gm4794"
                     /note="sulfotransferase family 3A, member 2"
                     /db_xref="GeneID:215895"
                     /db_xref="MGI:MGI:3645972"
     CDS             1..882
                     /gene="Sult3a2"
                     /gene_synonym="EG215895; Gm4794"
                     /codon_start=1
                     /product="uncharacterized protein LOC215895"
                     /protein_id="NP_001094922.1"
                     /db_xref="CCDS:CCDS48533.1"
                     /db_xref="GeneID:215895"
                     /db_xref="MGI:MGI:3645972"
                     /translation="
MDNKDEDIFKFKGYNFLRALVSMDIVKNMEDYEIRDDDIFIVTYPKSGTTWTQQILCLICFESHRNGTENIATIDRIPSFEYNIHKLDYAKMPSPRIFTSHIPYYLVPKGLKDKKAKIIYVYRNPKDVLISFFHFSNLMVVLKASDTLENFMQRFLNGNLVGSLWFDHIRGWYEHRHDFNIMFMSFEDMKKDLRSSVLKICSFLEKELSEEDMDAVVRQATFEKMKADPRANNEHIIKDELGTRNNTGAFLRKGIVGDWKHYLTVDQSERFDKIFHMNMKNIPLKFIWNINEK"
     misc_feature    106..840
                     /gene="Sult3a2"
                     /gene_synonym="EG215895; Gm4794"
                     /note="Sulfotransferase domain; Region: Sulfotransfer_1;
                     pfam00685"
                     /db_xref="CDD:425820"
     exon            1..142
                     /gene="Sult3a2"
                     /gene_synonym="EG215895; Gm4794"
                     /inference="alignment:Splign:2.1.0"
     exon            143..351
                     /gene="Sult3a2"
                     /gene_synonym="EG215895; Gm4794"
                     /inference="alignment:Splign:2.1.0"
     exon            352..478
                     /gene="Sult3a2"
                     /gene_synonym="EG215895; Gm4794"
                     /inference="alignment:Splign:2.1.0"
     exon            479..573
                     /gene="Sult3a2"
                     /gene_synonym="EG215895; Gm4794"
                     /inference="alignment:Splign:2.1.0"
     exon            574..760
                     /gene="Sult3a2"
                     /gene_synonym="EG215895; Gm4794"
                     /inference="alignment:Splign:2.1.0"
     exon            761..882
                     /gene="Sult3a2"
                     /gene_synonym="EG215895; Gm4794"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
atggacaataaagatgaagatatttttaaattcaaaggctataattttctcagagcgttagttagtatggatatagtgaaaaatatggaagattatgaaattcgggatgatgacatctttatagtcacatacccaaagtctggtaccacctggactcaacagatcctctgcttaatttgttttgagagtcaccggaatggaactgaaaacatcgcaacaatagatagaataccatcctttgagtacaatattcacaaattagactatgccaaaatgccatcccctcgaatcttcacttcccacattccatattacttagtaccaaaaggtctcaaggacaaaaaagccaaaattatttatgtctacagaaatcctaaagatgttttgatctccttttttcatttctcaaatttgatggttgtactcaaagcttcagatactctggaaaattttatgcaaagatttctaaatggaaacttggtaggaagcctttggtttgaccacataagaggctggtatgaacacagacatgatttcaatataatgttcatgagctttgaagacatgaagaaggacctcagaagctcagtgcttaaaatctgcagttttctggagaaagaactgagtgaagaagatatggatgctgttgtgagacaagctacctttgagaaaatgaaagctgacccacgagcaaacaatgaacacattataaaagatgaactcggaacaagaaataatacgggagctttccttcgcaaaggtatcgttggagactggaaacattatttgactgtggatcaaagtgaaagatttgacaagatatttcatatgaacatgaaaaacatccccttaaaattcatttggaatataaatgagaagtag
//

by @meso_cacase at DBCLS
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If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596. [Full Text]