LOCUS       XM_054359018            9638 bp    mRNA    linear   PRI 26-AUG-2024
DEFINITION  PREDICTED: Homo sapiens succinyl-CoA:glutarate-CoA transferase
            (SUGCT), transcript variant X12, mRNA.
ACCESSION   XM_054359018
VERSION     XM_054359018.1
DBLINK      BioProject: PRJNA807723
KEYWORDS    RefSeq.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_060931) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_009914755.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/23/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9638
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /isolate="CHM13"
                     /db_xref="taxon:9606"
                     /chromosome="7"
                     /sex="female"
                     /cell_line="CHM13htert"
                     /tissue_type="hydatidiform mole"
                     /note="haploid cell line"
     gene            1..9638
                     /gene="SUGCT"
                     /gene_synonym="C7orf10; DERP13; GA3; ORF19"
                     /note="succinyl-CoA:glutarate-CoA transferase; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 1 mRNA, 5 ESTs, 41 long SRA reads, 2 Proteins, and
                     100% coverage of the annotated genomic feature by RNAseq
                     alignments, including 7 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:79783"
                     /db_xref="HGNC:HGNC:16001"
                     /db_xref="MIM:609187"
     CDS             17..1255
                     /gene="SUGCT"
                     /gene_synonym="C7orf10; DERP13; GA3; ORF19"
                     /codon_start=1
                     /product="succinate--hydroxymethylglutarate
                     CoA-transferase isoform X11"
                     /protein_id="XP_054214993.1"
                     /db_xref="GeneID:79783"
                     /db_xref="HGNC:HGNC:16001"
                     /db_xref="MIM:609187"
                     /translation="

MLATLARVAALRRTCLFSGRGGGRGLWTGRPQSDMNNIKPLEGVKILDLTRVLAGPFATMNLGDLGAEVIKVERPGAGDDTRTWGPPFVGTESTYYLSVNRNKKSIAVNIKDPKGVKIIKELAAVCDVFVENYVPGKLSAMGLGYEDIDEIAPHIIYCSITGYGQTGPISQRAGYDAVASAVSGLMHITGPENGDPVRPGVAMTDLATGLYAYGAIMAGLIQKYKTGKGLFIDCNLLSSQVACLSHIAANYLIGQKEAKRWGTAHGSIVPYQAFKTKDGYIVVGAGNNQQFATVCKILDLPELIDNSKYKTNHLRVHNRKELIKILSERFEEELTSKWLYLFEGSGVPYGPINNMKNVFAEPQVLHNGLVMEMEHPTVGKISVPDLRHSGILHHVEVDTGFYHTVWFWRESR"

     misc_feature    119..1168
                     /gene="SUGCT"
                     /gene_synonym="C7orf10; DERP13; GA3; ORF19"
                     /note="Crotonobetainyl-CoA:carnitine CoA-transferase CaiB
                     and related acyl-CoA transferases [Lipid transport and
                     metabolism]; Region: CaiB; COG1804"
                     /db_xref="CDD:441409"
ORIGIN      

atctgagacgcacgcgatgctggcgacgctggcgagggtggcagctctgcgcagaacctgcctcttctccggccggggcggcgggagggggctgtggactggccgcccgcagtcagatatgaacaatataaagccattggaaggggtaaaaattctggatctaacaagagtcctggcgggaccttttgctactatgaatttaggagatcttggagcagaagttataaaagtggagagaccaggagctggtgatgatacacgaacttgggggccaccttttgttgggacagaaagtacatattatctcagtgttaaccgaaataaaaaaagtattgctgttaatatcaaggatccaaaaggggtgaaaatcatcaaagagcttgcagctgtttgtgatgtgtttgtggaaaactatgtccctggcaaactgtctgcaatgggcctgggatatgaagatatagacgagattgctcctcacatcatctattgttccatcacagggtatggtcagacaggtccaatttctcagcgagctggttatgatgctgttgcctcggctgtttctggtctgatgcacatcacagggcctgagaatggagatccagttcgcccaggagtagctatgactgatcttgccactggcctgtatgcatatggagctattatggctggattgatacaaaaatacaaaactgggaaaggactgttcattgattgtaacctgctgtcatcccaggtggcgtgtttgtctcacatagctgcaaattatcttattggtcaaaaggaagcaaaacgttggggtacagctcatggcagtatcgttccttaccaggcttttaaaaccaaggatggctatattgtagttggagcaggaaataaccagcagtttgccaccgtctgcaagatcttggatttgcctgagttgattgataattccaagtataaaactaaccaccttcgggtacacaatagaaaagagcttattaaaatattatctgaacggtttgaagaagaactgaccagcaagtggttatatctttttgaaggcagtggagtcccgtatggcccaatcaacaacatgaagaatgtatttgcagaacctcaggtattacacaatggcctcgttatggagatggagcatccaactgtggggaagatttccgtcccagatctcaggcacagtggcatccttcaccatgtggaagttgacactggcttctaccacacagtgtggttctggagagagtcaagatgaagtcctgttgatagaagaactgtgtttattctgaagctctcgctcccaccccagggaaagccgaaggaggagcttgacaagctaaagggtaagccctggaaaaaggcataatctaaagtaacattaaggactagggtagtaaaaatgcacatgtgaaaaccatcacgaagagggtcatttggtttgctaaggaaatcaacattggctctaatattggtctaagtctctgagaaaggtcccttttctcacacctttgtttgcttctagtttccttttagacaaagtattggaagttatgaaatgtccttgttatagatgagagcaactgaccagatctgccacacacaggaatgcctcccattgctctccaggcatcagaagatgatccactgggctgcaaattatggaggaaaaatccattcatttatgaaggttttgaaatatccaacactaaagttgaagttcttgaagcctggccagtataaacaattttacataaagctctgtttacttctattcagaagcagtcaaaatgacccagttgttctgtggagcatggagctctggtgtctatcatccactggttggatttctttatggtcaggttataaagaggatcatcttagctacttcctgctataaaattttatcctcttttctcctatggaaggcaatactcaatggtccctgtagaatgtatcttattggtagcacacatcaaggctgtgtgtgtctgtgtgtgttctcaagatccccactgtcattaacagaagaggactatagatatgcttcctgttagaacacacaataaagctctttgattaaggctcacactaattgcatgtgaagtctgctacccattgaattcaggttaaaggtaaaactaataaagatgttacaggtgaacattggccttcctgaaattgcataaatgtaattgatgagaaaaaacaatgaaacaaagtaatgaatatgttattaatttcctggttcaagtttgaagtcaagaagagataaaaagttcatcagaattggtgttttatcaggtaaaactggattcatatttttttaattctaggagcaacaattcatccttggttatttctcagaattattccatattgtttggaagctcaaaaacttgagcccatctccatctgttccttcgtttagctttgaaaacctttctatgcttctagtatatgtggatcagcctgctttctcctccttcttcctaggactcttttgctgccttagtccttggctctgacaaccctttggtttagttgtcctgcctaactgaaagcatgagattaaaccaaggcaatgagaacttggtgttcccaacttaagtttgtgtggtcagttcatcagaactcaccatgctttcttcttaacagtacaggcttcttaattaggtatctgtccagctcatgaactgcaagaggtgaagacctttcccttgcatatttggaataaaaaacagcttgcctctggtgatttgggaccttggccccagtaactcagctgttctttattcctacagtctaccttcatgtgcgactttgagaatctcaagggttagagaatggagaacaacaattaaattgggactcttcgagtttcttttatttgatccttagtttgcattacatagaaattaacagcatgggccttggagtttaacaccctaaggtcagatctttactctgacccatattctgtatgaacttagaaaagtttctgatcctctctgtgtcagttttacctataggcataatatagctatttatctcacagaattgtcaggatgactgagtgacacaatacatgcaaaatgcttactacagaataaggccttgttaaatgttggctgctataattgttgtaaatagtgttaaattggccttctagaagttaagggtgggactttccaggatgtactttacctgttttaatgtatgaattttgtaacgtaaacatgcttaacttcccatgtgttttactataagtataagcagtggattgatttatccctatctcagtcccaaaacatcagtcaatcctggtctacctacttcagggcatatcccactgaactggctccccactgtgggagcaggatatgcaaccacagacagagtctccagtaaattcagtttccataagcttaaatcacagaaacactctggaggcaatgccaagtttcttccagaaagagaaatactatgatcatagctcacaaaatcaggctgaactttcacattctctcttgtatcactagtgaaaaaaaaatcttactgtcaaggaatctccaccctaggcaagatttatgttccactttcctgacatttggttcttttcctgggatcagactcattccaatatatttatgcttgaagagtccactggaaaactttccaagccagcaataggaaactgctacctggctgattctctcctcagctgctggcatagtggagaaaagacttcaggaaccttcagcagactgtctccctgtccagatttgtatcaacattaatgctttgctcatgattgaaaaacatgttcaggcttccagactcaaatatgtttcctttgctcataaccctctggtgagggaacaaatggttttggatccctggagagatgggatgtccctttatgactgagtttccctgaactcagtggggtgctgtgggctctctggatgccattatgatgaggctggagatgctccttgcttggctaaatcctcacatgttaatatttggcccgcctgttccgcagtgattgatattaagggatgagagtttttcctgaattttttcccgcatttttcaagcagaggtcacaatgacctgctgagaaggcaagaatggctatagcaatttagaagaaacatgacaatcacctcttgcttggtagaaacaggcaagggagtgatagccccaaaggaggagagagactggttattctaaagagtgcaatggagtcacaaagtatgaatgagcaggagagtagttggggatgagagatgtggagtaggacttatcgttactttacagtttgtggtttgttaatctgaactcttcttctctgccccaaagggaatctttcatctgtcatagtggttaagagcagagccttggtgtcagatgtacttgggtaagagctctgccacttagaagtatgccttggtcagcttgcctggcctctctaaaccttggtttcctcattattaaagataataattcctgttatatgcattaatgaaaaataaacatcagatcacctataatggtacctgccaaataattcaatgacactaaagagtggctagtgatagtagtggtagttggaatagtggccgaggttatggtattggtgttgaggatggtggtaacggcagtagaagcagaaaaggctgtaatacttgcaggctccagcgttttcaccgtatgattcaacggtcctccaagggcaccacagcagatgtactggcttggagagaaaccagagtttgttggcctcaccgctctactgcctcctcaaaagtatacttttcccaccacttcttccttcttttaatggagccagatttacaaatggaaaaaataaaacgggcctatatttctgacacctgcctcacctgtgatcctgagacttggcagcaaagatttcccaagggccatggcagaaactagtctataagtcttcctctttggggacccttgttccctttcctggatccccagccagacagcccaggtggtttttcatgccatcagactgacgttaaattcaacctcagttcttaaaggaaaaggtaccatttcctttcaccagtccctggagcccacctccatcctatgattggccttctcccagaatgactcatcaacccagagtttgtccttttgatgacccctgacgtcttcctgagatggggtgagacctgctgggaggaaaggcaatcattatttcatcccaagctgaggccacataaaacacttcccttctctaatgaatgggctccaaagggcaatctgacttgtcttggtatgaccctcctaggccaagggtggggatgagaatttaagctaatgttggtgttggaaacatttagatatcaatttctcaactttttctcattataacagatagttaatgctgttgtggatggacctttctttacctttcccccgacttttaagagactttacagaagcagaataggaaaccactctattaacagtgtgtggcctggaaagtgtcagtgtttcatataatgtggaggcctagtatatataaacatgagcctcaaggaatatggagagtcatgctttgaaatgaggcaaaatagtgcaatggctaaaacaatgcatgatagagtagaacagattgggtttgaattaagaatgtggacatgccactttattttctaggcttcattttcctcatgggtatactggggctattgatggtaccctatctcgtaggtactatgttagataagacataaaatgcacagcatggtgcctgatgtaccatggtaggatgtggcaggggccactagcgggaaataagcaccatcacttggagctccaagaagacaacactaagctactgtggggatgaacacttagattcagggtattcatgagttgacattcagattgggacttgaaggagagtgtggcttccacagtggctaaataagtattacaggtagagaatgaaaacagagctgtgaaaggtaaattcatcaagcaatgaattgtgtgtggatagcaagatgcatgtgtgtgggtagaatagtgaatgaagaaataagctgggccaaaatattggatggcttgactaatacactaagaagttcttccagaatgcgatgcctccatagtggtcattctcctaggcctgctaactagccaactcccagaattattaactccaacaggcaagataatttggagatacccatgttggtatgcagtaagcatcccagcatatgctttaggattatttctacccctgtaattcagacctactgacaggtccgaactattggaaggacaggcccagaaaagtctatttatatgagaaatcagggtactgccagggaaaataaccacttcaggaacttgactcttggtcaaacatgtagcttgagagagtaggaacaattataaatccatgggatctcctacttccgtttcccttggacctatacctgagtccaatattagataaaggtcctgtacaccagaaatggcagggagtcctaagcccatggaatagaacctttgaggacctcaaggtggaaaagaggaccagtataaccagtggctggaagagtggcatgtagtgaagttgaagattgaagcagaggccagatgataaagaacattctaagtcctgaaggatagtctgaatttattaatatttctaaataaaatgggaagttaccaaggggaatttaagcagctgagtgatatgacatacttatgagtcagaaagaccatacatatttggagactgtgttgggtaggaaaaggtctggaagctggaaaccagttaggaaactactgtagtagtaagagcaagaggttgtgatgaccttcattgctacaagggtagtggaaggagtcatggagacaagtatagattcaaaatgtctttttaacatagaatcacagagctcaataatggattagaaaagtagtgaagacagagaggttggagtcaagaaagtctcctaagtttctggattcagcaaccaggccaacagtggtagtattgactgagacagaatacacaggggtgagaaggtgctttggctggaagacacaagagttctgattttgagaagttcaaataggtccttaggtaggcatatgtttatccaagacctttcaatgccctgggagttgtctggactagagagacaaaggtgggagggctgagcttcctgaaagagaggaaaaagacagggctctggaactaacctccaagcaactccaaaattttgtgtttgggaggagaaggcagagccagtaaagacactgaaaagaagtgcccaataaatttgaatgaaaagcaggggaatgtggtaccggaaagtgggggttggagagtgctttcaaacaagggagggctcagcagggtcaggtgccactaaagggctcactatggcaggtgtggcactaagcattctacatgcagcatcttattttatctctgaagtggcagagctggggttgaaaacaaggtacatctgactccaaagccaatgcattttctactaccctatgctccataggcatccatgccctcattttgcagataaaatattgaatgtcagagaataaagtggctacacagaccgagaggaactcatgttcgactgaaacctggggcatctcactcctaaatctatgtcacttctcctacagcaggcttcctctcctactctgcttccaacatggacttggaaaactctgggaatatatgcaaatgcttctccatgaagtagaaagaaaggtactttttctaccacaaaaggtagagatagggaggccgaggcagaagaatcacttgaacccgggaagcgaaagttgcagtgagccgagatcatgccactgcactccagtgtggcgacagagtgagactccatccaaaaaaaaaaaaaagaagaaaggtagaggtagagataaacccaagatcaggttttccagcagtgtgtttgaaaaattaaaataagcttgatttgcataggaagcaaaaattaatgacattctaagccttgtgctttaaggcacattcataggtttaaaaaaaataaccatgtcacataataaggcaaggtgcactttgggtgtggtaaactggaacacccaagcagggactacaggcatgggttgggtgcacctgcacttgggaggatttatggcagaccacagataggtactgctcactgcatcagtcagggccaaaggattacaggtggaagggaggtgtcaagtaggaagtctgagaagagcccaggtcacctactcccgagtatgcattggaaggggactcagatgcacctgggtgtggcagtgtccacttctgtttctggaaccagagccatggctgctgctcagctaggctggctctgctgctctcctcccttagctgtcagttaggctgagacaaaaagcctgtggcctgatactgctgcatggattgtgttttctttgactgattttcttttggcacaaaagtggcaagaaaatgaaaatgcgccggagcttgactgtgatgaatggggcaggagggtggtaggaagaaggctggtccaggagttaagctgtgccttgaagtacatcgatgggctgggcaggcagtggtggatcacagctggtaaaagcgtggaccctggtgggtaggccagccagctggctgtcatggctctcaagggacatctggaaagtacgggggatcagtctgtggcttttagctggacttggtcttgaaacacatggtctgaagtgttccctgggaggactgctagtggcaatccttgagggttatgtgttctgtggatccaccttgctgggaggagagagtgtctcagagtactgttaactttggcatgggctttgagacaggatcttggaaaggttatgccttatcccaagcaccgaaatgccatcaaaagtagttcccaggggcctttttaagggcctgatcatgagccttagctgtcttcagaatcagaaacagaacacatgctcagacccccataattcactaccttgagggcttgagagtagattcttatgccccaggctgagatctctttctgtggaatcccatgtggacacataacaaattatctcatcaccaatctcttgcctaagaaactcccttcaaacttcctttgacttattaatataggtcaagtagtttattacctactgacaacagttctcacggttctattccactggaccttttacaagcaaaatcccaggaaaagactatccctgttaccactttcctgagttcaaagtctaagttcaaagactaagtctcatgcactatataaaatagtcccacaactcagattctacccttttacccccttgttttcaacgtgatacctgacaaccatgttatttgggtatttgtgtttatttctgcctttgtcctgtagaatgcaagctccatgaggtcagtcatattgcatcgttcacttagcagtgatagcatatctgacatatagtagttgttcaatgagcactgattcaatcattgaatgaataaaagttctgtgtgggttgccatatggggcataatgaggagacaggtgagcaactgagaggtaagccta

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