2025-09-18 11:27:18, GGRNA.v2 : RefSeq release 231 (Jul, 2025)
LOCUS NR_188615 1631 bp RNA linear PRI 21-SEP-2023 DEFINITION Homo sapiens uncharacterized LOC105376156 (LOC105376156), transcript variant 3, long non-coding RNA. ACCESSION NR_188615 XR_001746849 XR_007079767 VERSION NR_188615.1 KEYWORDS RefSeq. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. COMMENT VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AL161729.27. On or before Sep 21, 2023 this sequence version replaced XR_001746849.2, XR_007079767.1. ##Evidence-Data-START## Transcript exon combination :: SRR14038191.1748726.1, SRR18074969.2724705.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA2151741, SAMEA2152474 [ECO:0000348] ##Evidence-Data-END## PRIMARY REFSEQ_SPAN PRIMARY_IDENTIFIER PRIMARY_SPAN COMP 1-107 AL161729.27 134022-134128 108-299 AL161729.27 137560-137751 300-1631 AL161729.27 144688-146019 FEATURES Location/Qualifiers source 1..1631 /organism="Homo sapiens" /mol_type="transcribed RNA" /db_xref="taxon:9606" /chromosome="9" /map="9q22.32" gene 1..1631 /gene="LOC105376156" /note="uncharacterized LOC105376156" /db_xref="GeneID:105376156" ncRNA 1..1631 /ncRNA_class="lncRNA" /gene="LOC105376156" /product="uncharacterized LOC105376156, transcript variant 3" /db_xref="GeneID:105376156" exon 1..107 /gene="LOC105376156" /inference="alignment:Splign:2.1.0" exon 108..299 /gene="LOC105376156" /inference="alignment:Splign:2.1.0" exon 300..1631 /gene="LOC105376156" /inference="alignment:Splign:2.1.0" regulatory 1608..1613 /regulatory_class="polyA_signal_sequence" /gene="LOC105376156" /note="hexamer: AATAAA" polyA_site 1631 /gene="LOC105376156" /note="major polyA site" ORIGIN
agagccgcagccgccgcgcaggcagggccgggccgggccgggtgcgcgggcacaaaggggccgctgcacatggcaggcaggcgagcagatgccagcagacagcttttgttggatgaagtctactctccagtgtattcttcaggaagagcattagcacactgttccatggatagcttggatggatattaaatctgtgactggcactttctttccttgagtccatgaaaatgctgcttcactcctgcctgaccttttctgtggctgtgagaagcctgataccctgcctgattttctttccttgttttgtggaaggtagtacttgcaagggatgaaactggatattttactgaggagatttctaagcaaaatgtcgaagaagtgacttggttcctcccagttgattgtagtaaaatgcaagaagagagaaatgaattgaaaaaggaattgttgagcaaaaatgaaccagagtttaaagatttggaaaattctctgtctgttcatatgacgaaaaatgagaaagtgtgtactgaagagaacactaagggtgtggtggaccaaccatttcataaagagattagtgtggctgtgtaccatgaacttaatcagccatttcaacagaggccgggaatacagatgggattacacctgcagagacactgctggctgggactaaaaaaaacagaacatggaatggaatgaaggaaggccgtgactttgtgctatcatctagtaaaagggatgaagggccccgaggcaatttggaggtcctctgcctccaatttgaaggactattgccctggtttcaatagtccagacagcttccaaccaaagatgtggaggcacaatctttgcctggtagagaagctaggggtgcaacatctggccaggaatgctgctggggtgggacctttaccctagtggctccagaaggcagggcatcaaaccaaggattactcccaagccttaagatttcatggagtttgctttgtagtttggacttgcttgggactgggtcaccccttccttctgtgtttcttgcttttggaatgggaatgcctatcctatgcctgtcccaccaatgtattttggaagtatacaacttgtttggtttcacagattcgcagctggagaggaattttgccccaggatgaatcataactcaagtctcactgtacctaatttagaagatatttagaaaagactttggactttagacattagcgttgttgctggaatgagttaagactttggaggatggaatgaatgtacagatgctccttgacttagaatggggttatgtcccaataaacccattgtaagtaaaaaaatatataagtaaaaatgcattcagtaccctgataaacccatggtaaagtcaaaaaatcagaagatgcttttcaacttacaatggggttatttatttcctgatagacccatcgcaaaatttaaaaattgtaagttgaaccatcatatgttgaggacaatgtgtatttggcacatgagaaggacatgaattttggggggccaggggtagaatgctatggactgaacttatgtgtctccctaaaattcgtacgttatgaccctagttcctaatgtgatgaggaaataaatgttcattgtttaggcca
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If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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