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Previous release (v1)
2025-09-16 17:36:03, GGRNA.v2 : RefSeq release 231 (Jul, 2025)
LOCUS NR_135530 437 bp RNA linear PRI 19-APR-2022
DEFINITION Homo sapiens long intergenic non-protein coding RNA 1935
(LINC01935), long non-coding RNA.
ACCESSION NR_135530 XR_923122 XR_927380
VERSION NR_135530.1
KEYWORDS RefSeq.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
COMMENT VALIDATED REFSEQ: This record has undergone validation or
preliminary review. The reference sequence was derived from
AC108051.3.
On or before Mar 18, 2016 this sequence version replaced
XR_923122.1, XR_927380.1.
Sequence Note: The RefSeq transcript and protein were derived from
genomic sequence to make the sequence consistent with the reference
genome assembly. The genomic coordinates used for the transcript
record were based on alignments.
##Evidence-Data-START##
Transcript exon combination :: AA682761.1 [ECO:0000332]
RNAseq introns :: single sample supports all introns
SAMEA2148874, SAMEA2161674
[ECO:0000348]
##Evidence-Data-END##
PRIMARY REFSEQ_SPAN PRIMARY_IDENTIFIER PRIMARY_SPAN COMP
1-74 AC108051.3 75316-75389 c
75-221 AC108051.3 61801-61947 c
222-339 AC108051.3 59897-60014 c
340-437 AC108051.3 58368-58465 c
FEATURES Location/Qualifiers
source 1..437
/organism="Homo sapiens"
/mol_type="transcribed RNA"
/db_xref="taxon:9606"
/chromosome="2"
/map="2q12.1"
gene 1..437
/gene="LINC01935"
/note="long intergenic non-protein coding RNA 1935"
/db_xref="GeneID:105373519"
/db_xref="HGNC:HGNC:52758"
ncRNA 1..437
/ncRNA_class="lncRNA"
/gene="LINC01935"
/product="long intergenic non-protein coding RNA 1935"
/db_xref="GeneID:105373519"
/db_xref="HGNC:HGNC:52758"
exon 1..74
/gene="LINC01935"
/inference="alignment:Splign:2.1.0"
variation 4..10
/gene="LINC01935"
/replace="ttct"
/replace="ttcttct"
/db_xref="dbSNP:1675259699"
variation 6
/gene="LINC01935"
/replace="a"
/replace="c"
/db_xref="dbSNP:780552138"
variation 7
/gene="LINC01935"
/replace="c"
/replace="t"
/db_xref="dbSNP:1407417426"
variation 8
/gene="LINC01935"
/replace="c"
/replace="t"
/db_xref="dbSNP:2104289444"
variation 12
/gene="LINC01935"
/replace="c"
/replace="t"
/db_xref="dbSNP:2104289435"
variation 13
/gene="LINC01935"
/replace="c"
/replace="t"
/db_xref="dbSNP:778352427"
variation 15
/gene="LINC01935"
/replace="c"
/replace="g"
/replace="t"
/db_xref="dbSNP:895454792"
variation 16
/gene="LINC01935"
/replace="c"
/replace="t"
/db_xref="dbSNP:756437401"
variation 19
/gene="LINC01935"
/replace=""
/replace="g"
/db_xref="dbSNP:2104289422"
variation 20
/gene="LINC01935"
/replace="c"
/replace="t"
/db_xref="dbSNP:1675259487"
variation 21
/gene="LINC01935"
/replace="a"
/replace="g"
/db_xref="dbSNP:1355820271"
variation 22
/gene="LINC01935"
/replace="g"
/replace="t"
/db_xref="dbSNP:1035401920"
variation 23
/gene="LINC01935"
/replace="c"
/replace="t"
/db_xref="dbSNP:1001399107"
variation 24
/gene="LINC01935"
/replace="c"
/replace="t"
/db_xref="dbSNP:1340693904"
variation 25
/gene="LINC01935"
/replace="c"
/replace="g"
/db_xref="dbSNP:1675259285"
variation 29
/gene="LINC01935"
/replace="a"
/replace="g"
/db_xref="dbSNP:972221853"
variation 30
/gene="LINC01935"
/replace="c"
/replace="t"
/db_xref="dbSNP:1411186404"
variation 31
/gene="LINC01935"
/replace="a"
/replace="g"
/replace="t"
/db_xref="dbSNP:868785891"
variation 33
/gene="LINC01935"
/replace="g"
/replace="t"
/db_xref="dbSNP:905795749"
variation 35
/gene="LINC01935"
/replace="a"
/replace="g"
/db_xref="dbSNP:1675259030"
variation 38
/gene="LINC01935"
/replace="a"
/replace="c"
/db_xref="dbSNP:2466642711"
variation 40
/gene="LINC01935"
/replace="c"
/replace="g"
/db_xref="dbSNP:1261367907"
variation 45
/gene="LINC01935"
/replace="c"
/replace="t"
/db_xref="dbSNP:1042833955"
variation 57
/gene="LINC01935"
/replace="g"
/replace="t"
/db_xref="dbSNP:1675258857"
variation 60
/gene="LINC01935"
/replace="c"
/replace="g"
/db_xref="dbSNP:1573143636"
variation 62
/gene="LINC01935"
/replace="a"
/replace="c"
/db_xref="dbSNP:1190777498"
variation 63
/gene="LINC01935"
/replace="a"
/replace="c"
/replace="t"
/db_xref="dbSNP:947242860"
variation 67
/gene="LINC01935"
/replace="c"
/replace="t"
/db_xref="dbSNP:1675258640"
variation 69
/gene="LINC01935"
/replace="a"
/replace="c"
/db_xref="dbSNP:2104289390"
variation 72
/gene="LINC01935"
/replace="a"
/replace="g"
/db_xref="dbSNP:746189765"
variation 73
/gene="LINC01935"
/replace="a"
/replace="g"
/db_xref="dbSNP:985436899"
exon 75..221
/gene="LINC01935"
/inference="alignment:Splign:2.1.0"
variation 77
/gene="LINC01935"
/replace="a"
/replace="g"
/db_xref="dbSNP:956050093"
variation 78
/gene="LINC01935"
/replace="g"
/replace="t"
/db_xref="dbSNP:1674985404"
variation 84
/gene="LINC01935"
/replace="a"
/replace="g"
/db_xref="dbSNP:1674985368"
variation 85
/gene="LINC01935"
/replace="c"
/replace="t"
/db_xref="dbSNP:56928597"
variation 89
/gene="LINC01935"
/replace="c"
/replace="g"
/db_xref="dbSNP:2466627204"
variation 92
/gene="LINC01935"
/replace="c"
/replace="t"
/db_xref="dbSNP:1398812612"
variation 94
/gene="LINC01935"
/replace="a"
/replace="t"
/db_xref="dbSNP:1674985284"
variation 97
/gene="LINC01935"
/replace="a"
/replace="t"
/db_xref="dbSNP:545277732"
variation 98
/gene="LINC01935"
/replace="c"
/replace="t"
/db_xref="dbSNP:898456342"
variation 103
/gene="LINC01935"
/replace="g"
/replace="t"
/db_xref="dbSNP:1449061745"
variation 110
/gene="LINC01935"
/replace="c"
/replace="t"
/db_xref="dbSNP:180990077"
variation 111
/gene="LINC01935"
/replace="a"
/replace="g"
/db_xref="dbSNP:1674984767"
variation 112
/gene="LINC01935"
/replace="g"
/replace="t"
/db_xref="dbSNP:1367036306"
variation 115
/gene="LINC01935"
/replace="c"
/replace="t"
/db_xref="dbSNP:1385259185"
variation 117
/gene="LINC01935"
/replace="g"
/replace="t"
/db_xref="dbSNP:556387367"
variation 119
/gene="LINC01935"
/replace="c"
/replace="t"
/db_xref="dbSNP:2104276904"
variation 124
/gene="LINC01935"
/replace="c"
/replace="t"
/db_xref="dbSNP:1004441011"
variation 127
/gene="LINC01935"
/replace="c"
/replace="t"
/db_xref="dbSNP:189646187"
variation 128
/gene="LINC01935"
/replace="c"
/replace="t"
/db_xref="dbSNP:1368503392"
variation 129
/gene="LINC01935"
/replace="a"
/replace="t"
/db_xref="dbSNP:1046037894"
variation 141..143
/gene="LINC01935"
/replace="ttc"
/replace="ttcttc"
/db_xref="dbSNP:1206570879"
variation 141
/gene="LINC01935"
/replace="c"
/replace="t"
/db_xref="dbSNP:1674984382"
variation 143
/gene="LINC01935"
/replace="a"
/replace="c"
/replace="g"
/db_xref="dbSNP:1674984293"
variation 145
/gene="LINC01935"
/replace="a"
/replace="c"
/replace="g"
/db_xref="dbSNP:1435700798"
variation 149
/gene="LINC01935"
/replace="c"
/replace="t"
/db_xref="dbSNP:1674984196"
variation 151
/gene="LINC01935"
/replace="a"
/replace="g"
/db_xref="dbSNP:2466627165"
variation 153
/gene="LINC01935"
/replace="a"
/replace="g"
/db_xref="dbSNP:1674984160"
variation 154
/gene="LINC01935"
/replace="c"
/replace="t"
/db_xref="dbSNP:2104276860"
variation 156
/gene="LINC01935"
/replace="g"
/replace="t"
/db_xref="dbSNP:1674984125"
variation 158
/gene="LINC01935"
/replace="a"
/replace="g"
/db_xref="dbSNP:1674983968"
variation 159
/gene="LINC01935"
/replace="a"
/replace="g"
/db_xref="dbSNP:1674983918"
variation 163
/gene="LINC01935"
/replace="c"
/replace="t"
/db_xref="dbSNP:1253458711"
variation 164
/gene="LINC01935"
/replace="a"
/replace="t"
/db_xref="dbSNP:2104276851"
variation 165
/gene="LINC01935"
/replace="a"
/replace="g"
/db_xref="dbSNP:950196407"
variation 168
/gene="LINC01935"
/replace="a"
/replace="t"
/db_xref="dbSNP:754439828"
variation 171
/gene="LINC01935"
/replace="g"
/replace="t"
/db_xref="dbSNP:2466627119"
variation 178
/gene="LINC01935"
/replace="c"
/replace="t"
/db_xref="dbSNP:573634889"
variation 179
/gene="LINC01935"
/replace="a"
/replace="t"
/db_xref="dbSNP:1487879499"
variation 180
/gene="LINC01935"
/replace="a"
/replace="c"
/db_xref="dbSNP:1189026139"
variation 181
/gene="LINC01935"
/replace="c"
/replace="t"
/db_xref="dbSNP:1674983582"
variation 182
/gene="LINC01935"
/replace="c"
/replace="t"
/db_xref="dbSNP:1674983532"
variation 183
/gene="LINC01935"
/replace="c"
/replace="t"
/db_xref="dbSNP:1205437707"
variation 185
/gene="LINC01935"
/replace="c"
/replace="g"
/replace="t"
/db_xref="dbSNP:555470844"
variation 186
/gene="LINC01935"
/replace="a"
/replace="g"
/db_xref="dbSNP:533665122"
variation 194
/gene="LINC01935"
/replace="c"
/replace="t"
/db_xref="dbSNP:965702021"
variation 202
/gene="LINC01935"
/replace="a"
/replace="c"
/replace="t"
/db_xref="dbSNP:1349317058"
variation 205
/gene="LINC01935"
/replace="c"
/replace="t"
/db_xref="dbSNP:2466627078"
variation 206
/gene="LINC01935"
/replace="a"
/replace="c"
/replace="t"
/db_xref="dbSNP:1227083263"
variation 208
/gene="LINC01935"
/replace="c"
/replace="t"
/db_xref="dbSNP:1674983286"
variation 210
/gene="LINC01935"
/replace="a"
/replace="c"
/replace="g"
/db_xref="dbSNP:1004303742"
variation 214
/gene="LINC01935"
/replace="g"
/replace="t"
/db_xref="dbSNP:557951276"
variation 215
/gene="LINC01935"
/replace="a"
/replace="t"
/db_xref="dbSNP:1284851340"
variation 218
/gene="LINC01935"
/replace="g"
/replace="t"
/db_xref="dbSNP:1674983123"
variation 220
/gene="LINC01935"
/replace="a"
/replace="g"
/db_xref="dbSNP:1405311495"
variation 221
/gene="LINC01935"
/replace="a"
/replace="g"
/db_xref="dbSNP:1674983059"
exon 222..339
/gene="LINC01935"
/inference="alignment:Splign:2.1.0"
variation 223
/gene="LINC01935"
/replace="a"
/replace="c"
/db_xref="dbSNP:1674951243"
variation 228
/gene="LINC01935"
/replace="a"
/replace="g"
/db_xref="dbSNP:542155599"
variation 229
/gene="LINC01935"
/replace="c"
/replace="t"
/db_xref="dbSNP:1464778168"
variation 231
/gene="LINC01935"
/replace="a"
/replace="g"
/db_xref="dbSNP:898581519"
variation 232..240
/gene="LINC01935"
/replace="aagaag"
/replace="aagaagaag"
/db_xref="dbSNP:1243288872"
variation 235
/gene="LINC01935"
/replace="a"
/replace="t"
/db_xref="dbSNP:1674951109"
variation 237
/gene="LINC01935"
/replace="g"
/replace="t"
/db_xref="dbSNP:370278512"
variation 238
/gene="LINC01935"
/replace="a"
/replace="g"
/replace="t"
/db_xref="dbSNP:1379124534"
variation 239
/gene="LINC01935"
/replace="a"
/replace="c"
/db_xref="dbSNP:1176613466"
variation 241
/gene="LINC01935"
/replace="a"
/replace="g"
/replace="t"
/db_xref="dbSNP:916517778"
variation 243
/gene="LINC01935"
/replace="a"
/replace="c"
/db_xref="dbSNP:2466625267"
variation 245
/gene="LINC01935"
/replace="c"
/replace="g"
/replace="t"
/db_xref="dbSNP:573682542"
variation 247
/gene="LINC01935"
/replace="a"
/replace="t"
/db_xref="dbSNP:2104275088"
variation 248..249
/gene="LINC01935"
/replace="tt"
/replace="ttt"
/db_xref="dbSNP:1674950837"
variation 250
/gene="LINC01935"
/replace=""
/replace="g"
/db_xref="dbSNP:1674950802"
variation 250
/gene="LINC01935"
/replace="a"
/replace="g"
/db_xref="dbSNP:1426924037"
variation 251
/gene="LINC01935"
/replace="c"
/replace="t"
/db_xref="dbSNP:762544249"
variation 251
/gene="LINC01935"
/replace="t"
/replace="tt"
/db_xref="dbSNP:1674950728"
variation 256
/gene="LINC01935"
/replace="a"
/replace="g"
/db_xref="dbSNP:1674950671"
variation 257
/gene="LINC01935"
/replace="a"
/replace="t"
/db_xref="dbSNP:1448782350"
variation 258
/gene="LINC01935"
/replace="g"
/replace="t"
/db_xref="dbSNP:1030475327"
variation 261
/gene="LINC01935"
/replace="a"
/replace="c"
/db_xref="dbSNP:2104275057"
variation 265
/gene="LINC01935"
/replace="a"
/replace="g"
/replace="t"
/db_xref="dbSNP:73944459"
variation 266
/gene="LINC01935"
/replace="c"
/replace="t"
/db_xref="dbSNP:774818303"
variation 269
/gene="LINC01935"
/replace="c"
/replace="t"
/db_xref="dbSNP:2104275051"
variation 276
/gene="LINC01935"
/replace="a"
/replace="c"
/replace="t"
/db_xref="dbSNP:1320867685"
variation 279
/gene="LINC01935"
/replace="c"
/replace="t"
/db_xref="dbSNP:1366006523"
variation 284
/gene="LINC01935"
/replace="g"
/replace="t"
/db_xref="dbSNP:913484221"
variation 289
/gene="LINC01935"
/replace="a"
/replace="g"
/replace="t"
/db_xref="dbSNP:1313145964"
variation 291
/gene="LINC01935"
/replace="a"
/replace="g"
/db_xref="dbSNP:1573136575"
variation 294
/gene="LINC01935"
/replace="c"
/replace="t"
/db_xref="dbSNP:1385318601"
variation 296
/gene="LINC01935"
/replace="c"
/replace="t"
/db_xref="dbSNP:376318724"
variation 297
/gene="LINC01935"
/replace="c"
/replace="g"
/replace="t"
/db_xref="dbSNP:1265744549"
variation 300
/gene="LINC01935"
/replace="c"
/replace="g"
/replace="t"
/db_xref="dbSNP:989057458"
variation 310
/gene="LINC01935"
/replace="c"
/replace="t"
/db_xref="dbSNP:2466625226"
variation 312
/gene="LINC01935"
/replace="a"
/replace="g"
/db_xref="dbSNP:2242290"
variation 313
/gene="LINC01935"
/replace="c"
/replace="g"
/db_xref="dbSNP:1674949909"
variation 314
/gene="LINC01935"
/replace="a"
/replace="g"
/db_xref="dbSNP:1674949875"
variation 317
/gene="LINC01935"
/replace="g"
/replace="t"
/db_xref="dbSNP:1674949838"
variation 318
/gene="LINC01935"
/replace="c"
/replace="t"
/db_xref="dbSNP:1674949804"
variation 319
/gene="LINC01935"
/replace="c"
/replace="g"
/db_xref="dbSNP:1674949760"
variation 325
/gene="LINC01935"
/replace="c"
/replace="t"
/db_xref="dbSNP:1270016102"
variation 332
/gene="LINC01935"
/replace="a"
/replace="g"
/db_xref="dbSNP:1674949691"
variation 333
/gene="LINC01935"
/replace="c"
/replace="t"
/db_xref="dbSNP:1464931583"
variation 337
/gene="LINC01935"
/replace="a"
/replace="c"
/db_xref="dbSNP:543556389"
variation 339
/gene="LINC01935"
/replace="a"
/replace="g"
/db_xref="dbSNP:1674949609"
exon 340..437
/gene="LINC01935"
/inference="alignment:Splign:2.1.0"
variation 344..353
/gene="LINC01935"
/replace="aatgaa"
/replace="aatgaatgaa"
/db_xref="dbSNP:1674916904"
variation 346
/gene="LINC01935"
/replace="c"
/replace="t"
/db_xref="dbSNP:1436815736"
variation 353
/gene="LINC01935"
/replace="a"
/replace="g"
/db_xref="dbSNP:2104273223"
variation 356
/gene="LINC01935"
/replace="c"
/replace="t"
/db_xref="dbSNP:982520571"
variation 357..371
/gene="LINC01935"
/replace="aag"
/replace="aagactgacataaag"
/db_xref="dbSNP:1227017421"
variation 357
/gene="LINC01935"
/replace="a"
/replace="g"
/replace="t"
/db_xref="dbSNP:1674916849"
variation 362
/gene="LINC01935"
/replace="g"
/replace="t"
/db_xref="dbSNP:2104273218"
variation 367
/gene="LINC01935"
/replace=""
/replace="t"
/db_xref="dbSNP:1295661030"
variation 368
/gene="LINC01935"
/replace="a"
/replace="c"
/db_xref="dbSNP:573585045"
variation 371
/gene="LINC01935"
/replace="a"
/replace="c"
/replace="g"
/db_xref="dbSNP:1674916740"
variation 373
/gene="LINC01935"
/replace="c"
/replace="t"
/db_xref="dbSNP:1674916716"
variation 374
/gene="LINC01935"
/replace="c"
/replace="g"
/db_xref="dbSNP:192394430"
variation 377
/gene="LINC01935"
/replace="c"
/replace="t"
/db_xref="dbSNP:189028305"
variation 380
/gene="LINC01935"
/replace="g"
/replace="t"
/db_xref="dbSNP:1674916638"
variation 386
/gene="LINC01935"
/replace="c"
/replace="t"
/db_xref="dbSNP:1227177900"
variation 389
/gene="LINC01935"
/replace="c"
/replace="g"
/replace="t"
/db_xref="dbSNP:1376378429"
variation 391
/gene="LINC01935"
/replace="g"
/replace="t"
/db_xref="dbSNP:2104273194"
variation 396
/gene="LINC01935"
/replace="c"
/replace="t"
/db_xref="dbSNP:1674916546"
variation 400
/gene="LINC01935"
/replace="a"
/replace="g"
/db_xref="dbSNP:1674916519"
variation 402
/gene="LINC01935"
/replace="a"
/replace="c"
/replace="t"
/db_xref="dbSNP:1315302221"
variation 408
/gene="LINC01935"
/replace="a"
/replace="g"
/db_xref="dbSNP:1029467783"
variation 409
/gene="LINC01935"
/replace="c"
/replace="t"
/db_xref="dbSNP:1228328147"
variation 414
/gene="LINC01935"
/replace="a"
/replace="g"
/db_xref="dbSNP:2104273176"
variation 423
/gene="LINC01935"
/replace="a"
/replace="c"
/db_xref="dbSNP:1674916396"
variation 427
/gene="LINC01935"
/replace="a"
/replace="g"
/db_xref="dbSNP:1285536773"
variation 430
/gene="LINC01935"
/replace="c"
/replace="g"
/db_xref="dbSNP:1674916020"
variation 431
/gene="LINC01935"
/replace="a"
/replace="g"
/db_xref="dbSNP:1466354941"
variation 432
/gene="LINC01935"
/replace="c"
/replace="t"
/db_xref="dbSNP:976107697"
ORIGIN
gaattcttctcccatcttgtggttgaatatgctgagacagaggatattgtcctactttccacctcattcaagaagaagaaaatgctaagtatgaatttccagttttctccagtccctttcctgttgctaaatgaagatcattccatcattgtgtatcaaatgcagcatttgtgaaaatacctcccgatcatctttcacaggaattctttccaagtgagaaagccaccataaaagaagaaggccaccattgtatttatgaactatgccctgatatatttcaggaggctggtgaacactcattgtaacatttaagactttgtacaatttaatcacattcaggagtaatgaatgaagttaagactgacataaagcccagtattctcagcaggatggcatgtggcaaattcacagcaataaaataacaacatacattgaaa
//
by
@meso_cacase at
DBCLS
This page is licensed under a
Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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