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Previous release (v1)
2024-04-29 12:11:45, GGRNA.v2 : RefSeq release 222 (Jan, 2024)
LOCUS NM_001410194 6824 bp mRNA linear PRI 01-JAN-2023
DEFINITION Homo sapiens GRIP and coiled-coil domain containing 2 (GCC2),
transcript variant 2, mRNA.
ACCESSION NM_001410194 NR_028063
VERSION NM_001410194.1
KEYWORDS RefSeq.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 6824)
AUTHORS Liang XH, Sun H, Hsu CW, Nichols JG, Vickers TA, De Hoyos CL and
Crooke ST.
TITLE Golgi-endosome transport mediated by M6PR facilitates release of
antisense oligonucleotides from endosomes
JOURNAL Nucleic Acids Res 48 (3), 1372-1391 (2020)
PUBMED 31840180
REMARK GeneRIF: The co-localization of M6PR and of GCC2 with ASOs is
influenced by the PS modifications, which have been shown to
enhance the affinity of ASOs for proteins, suggesting that
localization of these proteins to LEs is mediated by ASO-protein
interactions. Reduction of M6PR levels also decreased PS-ASO
activity in mouse cells and in livers of mice treated
subcutaneously with PS-ASO, indicating a conserved mechanism.
REFERENCE 2 (bases 1 to 6824)
AUTHORS Kumar M, Kaur S, Nazir A and Tripathi RK.
TITLE HIV-1 Nef binds with human GCC185 protein and regulates mannose 6
phosphate receptor recycling
JOURNAL Biochem Biophys Res Commun 474 (1), 137-145 (2016)
PUBMED 27105913
REMARK GeneRIF: In light of existing report suggesting critical role of
Nef-GCC185 interaction reveals valuable mechanistic insights
affecting specific protein transport pathway in docking of late
endosome derived Rab9 bearing transport vesicle at TGN elucidating
role of Nef during viral pathogenesis.
REFERENCE 3 (bases 1 to 6824)
AUTHORS Cheung PY, Limouse C, Mabuchi H and Pfeffer SR.
TITLE Protein flexibility is required for vesicle tethering at the Golgi
JOURNAL Elife 4, e12790 (2015)
PUBMED 26653856
REMARK GeneRIF: These unexpected features support a model in which GCC185
collapses onto the Golgi surface, perhaps by binding to Rab
GTPases, to mediate vesicle tethering.
Publication Status: Online-Only
REFERENCE 4 (bases 1 to 6824)
AUTHORS Lin YC, Chiang TC, Liu YT, Tsai YT, Jang LT and Lee FJ.
TITLE ARL4A acts with GCC185 to modulate Golgi complex organization
JOURNAL J Cell Sci 124 (Pt 23), 4014-4026 (2011)
PUBMED 22159419
REMARK GeneRIF: Deletion of the ARL4A-interacting region of GCC185 results
in inability to maintain Golgi structure and modulate
endosome-to-Golgi transport.
REFERENCE 5 (bases 1 to 6824)
AUTHORS Hayes GL, Brown FC, Haas AK, Nottingham RM, Barr FA and Pfeffer SR.
TITLE Multiple Rab GTPase binding sites in GCC185 suggest a model for
vesicle tethering at the trans-Golgi
JOURNAL Mol Biol Cell 20 (1), 209-217 (2009)
PUBMED 18946081
REMARK GeneRIF: Results show that GCC185 contains at least six binding
sites for as many as 14 different Rab GTPases across its entire
length.
REFERENCE 6 (bases 1 to 6824)
AUTHORS Burguete AS, Fenn TD, Brunger AT and Pfeffer SR.
TITLE Rab and Arl GTPase family members cooperate in the localization of
the golgin GCC185
JOURNAL Cell 132 (2), 286-298 (2008)
PUBMED 18243103
REMARK GeneRIF: Rab and Arl GTPase family members cooperate in the
localization of GCC2.
REFERENCE 7 (bases 1 to 6824)
AUTHORS Luke MR, Kjer-Nielsen L, Brown DL, Stow JL and Gleeson PA.
TITLE GRIP domain-mediated targeting of two new coiled-coil proteins,
GCC88 and GCC185, to subcompartments of the trans-Golgi network
JOURNAL J Biol Chem 278 (6), 4216-4226 (2003)
PUBMED 12446665
REMARK GeneRIF: targeting to subcompartments of trans-Golgi network by
GRIP domain
REFERENCE 8 (bases 1 to 6824)
AUTHORS Krackhardt AM, Witzens M, Harig S, Hodi FS, Zauls AJ, Chessia M,
Barrett P and Gribben JG.
TITLE Identification of tumor-associated antigens in chronic lymphocytic
leukemia by SEREX
JOURNAL Blood 100 (6), 2123-2131 (2002)
PUBMED 12200376
REFERENCE 9 (bases 1 to 6824)
AUTHORS Eichmuller S, Usener D, Dummer R, Stein A, Thiel D and Schadendorf
D.
TITLE Serological detection of cutaneous T-cell lymphoma-associated
antigens
JOURNAL Proc Natl Acad Sci U S A 98 (2), 629-634 (2001)
PUBMED 11149944
REFERENCE 10 (bases 1 to 6824)
AUTHORS Scanlan MJ, Gordan JD, Williamson B, Stockert E, Bander NH,
Jongeneel V, Gure AO, Jager D, Jager E, Knuth A, Chen YT and Old
LJ.
TITLE Antigens recognized by autologous antibody in patients with
renal-cell carcinoma
JOURNAL Int J Cancer 83 (4), 456-464 (1999)
PUBMED 10508479
COMMENT REVIEWED REFSEQ: This record has been curated by NCBI staff. The
reference sequence was derived from AC068941.7 and AC012487.12.
On Jul 29, 2022 this sequence version replaced NR_028063.2.
Summary: The protein encoded by this gene is a peripheral membrane
protein localized to the trans-Golgi network. It is sensitive to
brefeldin A. This encoded protein contains a GRIP domain which is
thought to be used in targeting. Alternative splicing results in
multiple transcript variants. [provided by RefSeq, Jul 2009].
Publication Note: This RefSeq record includes a subset of the
publications that are available for this gene. Please see the Gene
record to access additional publications.
##Evidence-Data-START##
Transcript exon combination :: BC146789.1, AB002334.1 [ECO:0000332]
RNAseq introns :: single sample supports all introns
SAMEA1965299, SAMEA1966682
[ECO:0000348]
##Evidence-Data-END##
PRIMARY REFSEQ_SPAN PRIMARY_IDENTIFIER PRIMARY_SPAN COMP
1-75 AC068941.7 89008-89082
76-132 AC068941.7 89435-89491
133-200 AC068941.7 92201-92268
201-305 AC012487.12 8350-8454
306-2771 AC012487.12 9021-11486
2772-2844 AC012487.12 12197-12269
2845-2945 AC012487.12 14905-15005
2946-3044 AC012487.12 15122-15220
3045-3164 AC012487.12 21067-21186
3165-3329 AC012487.12 21657-21821
3330-3434 AC012487.12 22432-22536
3435-3597 AC012487.12 23519-23681
3598-3698 AC012487.12 25006-25106
3699-3776 AC012487.12 25201-25278
3777-3914 AC012487.12 25881-26018
3915-4036 AC012487.12 27069-27190
4037-4213 AC012487.12 29208-29384
4214-4431 AC012487.12 31943-32160
4432-4626 AC012487.12 34661-34855
4627-4766 AC012487.12 36340-36479
4767-4968 AC012487.12 38923-39124
4969-6824 AC012487.12 46930-48785
FEATURES Location/Qualifiers
source 1..6824
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/chromosome="2"
/map="2q12.3"
gene 1..6824
/gene="GCC2"
/gene_synonym="GCC185; RANBP2L4; REN53"
/note="GRIP and coiled-coil domain containing 2"
/db_xref="GeneID:9648"
/db_xref="HGNC:HGNC:23218"
/db_xref="MIM:612711"
exon 1..75
/gene="GCC2"
/gene_synonym="GCC185; RANBP2L4; REN53"
/inference="alignment:Splign:2.1.0"
exon 76..132
/gene="GCC2"
/gene_synonym="GCC185; RANBP2L4; REN53"
/inference="alignment:Splign:2.1.0"
misc_feature 129..131
/gene="GCC2"
/gene_synonym="GCC185; RANBP2L4; REN53"
/note="upstream in-frame stop codon"
exon 133..200
/gene="GCC2"
/gene_synonym="GCC185; RANBP2L4; REN53"
/inference="alignment:Splign:2.1.0"
exon 201..305
/gene="GCC2"
/gene_synonym="GCC185; RANBP2L4; REN53"
/inference="alignment:Splign:2.1.0"
CDS 288..5039
/gene="GCC2"
/gene_synonym="GCC185; RANBP2L4; REN53"
/note="isoform 2 is encoded by transcript variant 2; CTCL
tumor antigen se1-1; CLL-associated antigen KW-11; GCC
protein, 185-kD; GRIP and coiled-coil domain-containing
protein 2; Golgi coiled-coil protein GCC185; Ran-binding
protein 2-like 4; renal carcinoma antigen NY-REN-53; 185
kDa Golgi coiled-coil protein"
/codon_start=1
/product="GRIP and coiled-coil domain-containing protein 2
isoform 2"
/protein_id="NP_001397123.1"
/db_xref="GeneID:9648"
/db_xref="HGNC:HGNC:23218"
/db_xref="MIM:612711"
/translation="
MKQEVEDSVTKMGDAHKELEQSHINYVKEIENLKNELMAVRSKYSEDKANLQKQLEEAMNTQLELSEQLKFQNNSEDNVKKLQEEIEKIRPGFEEQILYLQKQLDATTDEKKETVTQLQNIIEANSQHYQKNINSLQEELLQLKAIHQEEVKELMCQIEASAKEHEAEINKLNELKENLVKQCEASEKNIQKKYECELENLRKATSNANQDNQICSILLQENTFVEQVVNEKVKHLEDTLKELESQHSILKDEVTYMNNLKLKLEMDAQHIKDEFFHEREDLEFKINELLLAKEEQGCVIEKLKSELAGLNKQFCYTVEQHNREVQSLKEQHQKEISELNETFLSDSEKEKLTLMFEIQGLKEQCENLQQEKQEAILNYESLREIMEILQTELGESAGKISQEFESMKQQQASDVHELQQKLRTAFTEKDALLETVNRLQGENEKLLSQQELVPELENTIKNLQEKNGVYLLSLSQRDTMLKELEGKINSLTEEKDDFINKLKNSHEEMDNFHKKCEREERLILELGKKVEQTIQYNSELEQKVNELTGGLEETLKEKDQNDQKLEKLMVQMKVLSEDKEVLSAEVKSLYEENNKLSSEKKQLSRDLEVFLSQKEDVILKEHITQLEKKLQLMVEEQDNLNKLLENEQVQKLFVKTQLYGFLKEMGSEVSEDSEEKDVVNVLQAVGESLAKINEEKCNLAFQRDEKVLELEKEIKCLQEESVVQCEELKSLLRDYEQEKVLLRKELEEIQSEKEALQSDLLEMKNANEKTRLENQNLLIQVEEVSQTCSKSEIHNEKEKCFIKEHENLKPLLEQKELRDRRAELILLKDSLAKSPSVKNDPLSSVKELEEKIENLEKECKEKEEKINKIKLVAVKAKKELDSSRKETQTVKEELESLRSEKDQLSASMRDLIQGAESYKNLLLEYEKQSEQLDVEKERANNFEHRIEDLTRQLRNSTLQCETINSDNEDLLARIETLQSNAKLLEVQILEVQRAKAMVDKELEAEKLQKEQKIKEHATTVNELEELQVQLQKQKKQLQKTMQELELVKKDAQQTTLMNMEIADYERLMKELNQKLTNKNNKIEDLEQEIKIQKQKQETLQEEITSLQSSVQQYEEKNTKIKQLLVKTKKELADSKQAETDHLILQASLKGELEASQQQVEVYKIQLAEITSEKHKIHEHLKTSAEQHQRTLSAYQQRVTALQEECRAAKAEQATVTSEFESYKVRVHNVLKQQKNKSMSQAETEGAKQEREHLEMLIDQLKIKLQDSQNNLQINVSELQTLQSEHDTLLERHNKMLQETVSKEAELREKLCSIQSENMMMKSEHTQTVSQLTSQNEVLRNSFRDQVRHLQEEHRKTVETLQQQLSKMEAQLFQLKNEPTTRSPVSSQQSLKNLRERRNTDLPLLDMHTVTREEGEGMETTDTESVSSASTYTQSLEQLLNSPETKLEPPLWHAEFTKEELVQKLSSTTKSADHLNGLLRETEATNAILMEQIKLLKSEIRRLERNQEREKSAANLEYLKNVLLQFIFLKPGSERERLLPVINTMLQLSPEEKGKLAAVAQGEEENASRSSGWASYLHSWSGLR"
misc_feature <336..2843
/gene="GCC2"
/gene_synonym="GCC185; RANBP2L4; REN53"
/note="Chromosome segregation ATPase [Cell cycle control,
cell division, chromosome partitioning]; Region: Smc;
COG1196"
/db_xref="CDD:224117"
misc_feature 2082..4418
/gene="GCC2"
/gene_synonym="GCC185; RANBP2L4; REN53"
/note="chromosome segregation protein SMC, common
bacterial type; Region: SMC_prok_B; TIGR02168"
/db_xref="CDD:274008"
misc_feature 4626..4820
/gene="GCC2"
/gene_synonym="GCC185; RANBP2L4; REN53"
/note="Rab binding domain; Region: Rab_bind; pfam16704"
/db_xref="CDD:435531"
misc_feature 4821..4952
/gene="GCC2"
/gene_synonym="GCC185; RANBP2L4; REN53"
/note="GRIP domain; Region: GRIP; pfam01465"
/db_xref="CDD:426274"
exon 306..2771
/gene="GCC2"
/gene_synonym="GCC185; RANBP2L4; REN53"
/inference="alignment:Splign:2.1.0"
exon 2772..2844
/gene="GCC2"
/gene_synonym="GCC185; RANBP2L4; REN53"
/inference="alignment:Splign:2.1.0"
exon 2845..2945
/gene="GCC2"
/gene_synonym="GCC185; RANBP2L4; REN53"
/inference="alignment:Splign:2.1.0"
exon 2946..3044
/gene="GCC2"
/gene_synonym="GCC185; RANBP2L4; REN53"
/inference="alignment:Splign:2.1.0"
exon 3045..3164
/gene="GCC2"
/gene_synonym="GCC185; RANBP2L4; REN53"
/inference="alignment:Splign:2.1.0"
exon 3165..3329
/gene="GCC2"
/gene_synonym="GCC185; RANBP2L4; REN53"
/inference="alignment:Splign:2.1.0"
exon 3330..3434
/gene="GCC2"
/gene_synonym="GCC185; RANBP2L4; REN53"
/inference="alignment:Splign:2.1.0"
exon 3435..3597
/gene="GCC2"
/gene_synonym="GCC185; RANBP2L4; REN53"
/inference="alignment:Splign:2.1.0"
exon 3598..3698
/gene="GCC2"
/gene_synonym="GCC185; RANBP2L4; REN53"
/inference="alignment:Splign:2.1.0"
exon 3699..3776
/gene="GCC2"
/gene_synonym="GCC185; RANBP2L4; REN53"
/inference="alignment:Splign:2.1.0"
exon 3777..3914
/gene="GCC2"
/gene_synonym="GCC185; RANBP2L4; REN53"
/inference="alignment:Splign:2.1.0"
exon 3915..4036
/gene="GCC2"
/gene_synonym="GCC185; RANBP2L4; REN53"
/inference="alignment:Splign:2.1.0"
exon 4037..4213
/gene="GCC2"
/gene_synonym="GCC185; RANBP2L4; REN53"
/inference="alignment:Splign:2.1.0"
exon 4214..4431
/gene="GCC2"
/gene_synonym="GCC185; RANBP2L4; REN53"
/inference="alignment:Splign:2.1.0"
exon 4432..4626
/gene="GCC2"
/gene_synonym="GCC185; RANBP2L4; REN53"
/inference="alignment:Splign:2.1.0"
exon 4627..4766
/gene="GCC2"
/gene_synonym="GCC185; RANBP2L4; REN53"
/inference="alignment:Splign:2.1.0"
exon 4767..4968
/gene="GCC2"
/gene_synonym="GCC185; RANBP2L4; REN53"
/inference="alignment:Splign:2.1.0"
exon 4969..6824
/gene="GCC2"
/gene_synonym="GCC185; RANBP2L4; REN53"
/inference="alignment:Splign:2.1.0"
regulatory 5069..5074
/regulatory_class="polyA_signal_sequence"
/gene="GCC2"
/gene_synonym="GCC185; RANBP2L4; REN53"
/note="hexamer: AATAGA"
polyA_site 5089
/gene="GCC2"
/gene_synonym="GCC185; RANBP2L4; REN53"
/note="major polyA site"
regulatory 5280..5285
/regulatory_class="polyA_signal_sequence"
/gene="GCC2"
/gene_synonym="GCC185; RANBP2L4; REN53"
/note="hexamer: AATAAA"
polyA_site 5300
/gene="GCC2"
/gene_synonym="GCC185; RANBP2L4; REN53"
/note="major polyA site"
regulatory 5742..5747
/regulatory_class="polyA_signal_sequence"
/gene="GCC2"
/gene_synonym="GCC185; RANBP2L4; REN53"
/note="hexamer: AATACA"
regulatory 5767..5772
/regulatory_class="polyA_signal_sequence"
/gene="GCC2"
/gene_synonym="GCC185; RANBP2L4; REN53"
/note="hexamer: AATAAA"
polyA_site 5768
/gene="GCC2"
/gene_synonym="GCC185; RANBP2L4; REN53"
polyA_site 5792
/gene="GCC2"
/gene_synonym="GCC185; RANBP2L4; REN53"
/note="major polyA site"
regulatory 5975..5980
/regulatory_class="polyA_signal_sequence"
/gene="GCC2"
/gene_synonym="GCC185; RANBP2L4; REN53"
/note="hexamer: AATAAA"
polyA_site 5998
/gene="GCC2"
/gene_synonym="GCC185; RANBP2L4; REN53"
regulatory 6702..6707
/regulatory_class="polyA_signal_sequence"
/gene="GCC2"
/gene_synonym="GCC185; RANBP2L4; REN53"
/note="hexamer: GATAAA"
polyA_site 6727
/gene="GCC2"
/gene_synonym="GCC185; RANBP2L4; REN53"
ORIGIN
agaggctggcgcaaacagaagtgcagcggtggcggcggctggttgcgggccggcggcgggctggcggagatggaggatcttgttcaagatggggtggcttcaccagctacccctgggaccgggaaatctaagaattggagaaagaaattgaagaactcagatcaaaacctgttactgaaggaactggtgatattattaaggcattaactgaacgtctggatgctcttcttctggaaaaagcagagactgagcaacagtgtctttctctgaaaaaggaaaatataaaaatgaagcaagaggttgaggattctgtaacaaagatgggagatgcacataaggagttggaacaatcacatataaactatgtgaaagaaattgaaaatttgaaaaatgagttgatggcagtacgttccaaatacagtgaagacaaagctaacttacaaaagcagctggaagaagcaatgaatacgcaattagaactttcagaacaacttaaatttcagaacaactctgaagataatgttaaaaaactacaagaagagattgagaaaattaggccaggctttgaggagcaaattttatatctgcaaaagcaattagacgctaccactgatgaaaagaaggaaacagttactcaactccaaaatatcattgaggctaattctcagcattaccaaaaaaatattaatagtttgcaggaagagcttttacagttgaaagctatacaccaagaagaggtgaaagagttgatgtgccagattgaagcatcagctaaggaacatgaagcagagataaataagttgaacgagctaaaagagaacttagtaaaacaatgtgaggcaagtgaaaagaacatccagaagaaatatgaatgtgagttagaaaatttaaggaaagccacctcaaatgcaaaccaagacaatcagatatgttctattctcttgcaagaaaatacatttgtagaacaagtagtaaatgaaaaagtcaaacacttagaagataccttaaaagaacttgaatctcaacacagtatcttaaaagatgaggtaacttatatgaataatcttaagttaaaacttgaaatggatgctcaacatataaaggatgagttttttcatgaacgggaagacttagagtttaaaattaatgaattattactagctaaagaagaacagggctgtgtaattgaaaaattaaaatctgagctagcaggtttaaataaacagttttgctatactgtagaacagcataacagagaagtacagagtcttaaggaacaacatcaaaaagaaatatcagaactaaatgagacatttttgtcagattcagaaaaagaaaaattaacattaatgtttgaaatacagggtcttaaggaacagtgtgaaaacctacagcaagaaaagcaagaagcaattttaaattatgagagtttacgagagattatggaaattttacaaacagaactgggggaatctgctggaaaaataagtcaagagttcgaatcaatgaagcaacagcaagcatctgatgttcatgaactgcagcagaagctcagaactgcttttactgaaaaagatgcccttctcgaaactgtgaatcgcctccagggagaaaatgaaaagttactatctcaacaagaattggtaccagaacttgaaaataccataaagaaccttcaagaaaagaatggagtatacttacttagtctcagtcaaagagataccatgttaaaagaattagaaggaaagataaattctcttactgaggaaaaagatgattttataaataaactgaaaaattcccatgaagaaatggataatttccataagaaatgtgaaagggaagaaagattgattcttgaacttgggaagaaagtagagcaaacaatccagtacaacagtgaactagaacaaaaggtaaatgaattaacaggaggactagaggagactttaaaagaaaaggatcaaaatgaccaaaaactagaaaaacttatggttcaaatgaaagttctctctgaagacaaagaagtattgtcagctgaagtgaagtctctttatgaggaaaacaataaactcagttcagaaaaaaaacagttgagtagggatttggaggtttttttgtctcaaaaagaagatgttatccttaaagaacatattactcaattagaaaagaaacttcagttaatggttgaagagcaagataatttaaataaactgcttgaaaatgagcaagttcagaagttatttgttaaaactcagttgtatggttttcttaaagaaatgggatcagaagtttcagaagacagtgaagagaaagatgttgttaatgtcctacaggcagtcggtgaatccttggcaaaaataaatgaggaaaaatgcaacctggcttttcagcgtgatgaaaaagtattagagttagaaaaagagattaagtgccttcaagaagagagtgtagttcagtgtgaagaacttaagtctttattgagagactatgagcaagagaaagttctcttaaggaaagagttagaagaaatacagtcagaaaaagaggccctgcagtctgatcttctagaaatgaagaatgctaatgaaaaaacaaggcttgaaaatcagaatcttttaattcaagttgaagaagtatctcaaacatgtagcaaaagtgaaatccataatgaaaaagaaaaatgttttataaaggaacatgaaaacctaaagccactactagaacaaaaagaattacgagataggagagcagagttgatactattaaaggattccttagcaaaatcaccttctgtaaaaaatgatcctctgtcttcagtaaaagagttggaagaaaaaatagaaaatctggaaaaagaatgcaaagaaaaggaggagaaaataaataagataaaattagttgccgtaaaggcaaagaaagaactagattccagcagaaaagagacccagactgtgaaggaagaacttgaatctcttcgatcagaaaaggaccagttatctgcttccatgagagatctcattcaaggagcagaaagctataagaatcttttattagaatatgaaaagcagtcagagcaactggatgtggaaaaagaacgtgctaataattttgagcatcgtattgaagaccttacaagacaattaagaaattcgactttgcagtgtgaaacaataaattctgataatgaagatctcctggctcgtattgagacattacagtctaatgccaaattattagaagtacagattttagaagtccagagagccaaagcaatggtagacaaagaattagaagctgaaaaacttcagaaagaacagaagataaaggaacatgccactactgtaaatgaacttgaagaacttcaggtacaacttcaaaagcaaaagaaacagcttcagaaaaccatgcaagaattagagctggttaaaaaggatgcccaacaaaccacattgatgaatatggaaatagctgattatgaacgtttgatgaaagaactaaatcaaaagttaactaataaaaacaacaagatagaagatttggagcaagaaataaaaattcaaaaacagaaacaagaaaccctacaagaagaaataacttcattacagtcttcagtacaacaatatgaagaaaaaaacaccaaaatcaagcaattgcttgtgaaaaccaaaaaggaactggcagattcaaagcaagcagaaactgatcacttaatacttcaagcatctttaaaaggtgagctggaggcaagccagcagcaagtagaagtctataaaatacagctggctgaaataacatcagagaagcacaaaatccacgagcacctgaaaacctctgcggaacagcaccagcgtacgctaagtgcataccagcagagagtgacagcactacaggaagagtgccgtgctgccaaggcagaacaagctactgtaacctctgaattcgagagctacaaagtccgagttcataatgttctaaaacaacagaaaaataaatctatgtctcaggctgaaactgagggcgctaaacaagaaagggaacatctggaaatgctgattgaccagctaaaaatcaaattacaagatagccaaaataacttacagattaatgtatctgaacttcaaacattgcagtctgaacatgatacactgctagaaaggcacaacaagatgctgcaggaaactgtgtccaaagaggcggaactccgggaaaaattgtgttcaatacagtcagagaacatgatgatgaaatctgaacatacacagactgtgagtcagctaacatcccagaacgaggtccttcgaaatagcttccgagatcaagtgcgacatttgcaggaagaacacagaaagacagtggagacattacagcagcagctctccaagatggaagcacagctcttccagcttaagaatgaaccgaccacaagaagcccagtttcctctcaacaatctttgaagaaccttcgagaaaggagaaacacagacctcccgcttctagacatgcacactgtaacccgggaagagggagaaggcatggagacaactgatacggagtctgtgtcttccgccagcacatacacacagtctttagagcagctgcttaactctcccgaaactaaacttgagcctccattatggcatgctgaatttaccaaagaagaattggttcagaagctcagttccaccacaaaaagtgcagatcacttaaacggcctgcttcgggaaacagaagcaaccaatgcaattcttatggagcaaattaagcttctcaaaagtgaaataagaagattggaaaggaatcaagagcgagagaagtctgcagctaacctggaatacttgaagaacgtcttgctgcagttcattttcttgaaaccaggtagtgaaagagagagacttcttcctgttataaatacgatgttgcagctcagccctgaagaaaagggaaaacttgctgcggttgctcaaggtgaggaagaaaatgcttcccgttcttctggatgggcatcctatcttcatagttggtctggacttcgataggttgatggaaggaatatttttattaaccaaatagaatctatttacaaaaatggttcacgtatattaccacaattcttttgtcaaaaagtgtgtatatatgtttgcatctacatatatttgtacatctatatgacagatgtattttaaaagtttcatcttgaagtaaaagtacaacagcttgaagtgttgatagcaggccacagccctctaactcatgtgatttcccatgcatgctgccagaataaaaccaccaggaatgaattcactccccacttctctggaacctcaggacccgcccatttctcggcagtactgtgaattttgaagttaaactaaattttggtaccataccaactggaatttaggctttaaaaataatgtttcaaggccaggtgtggtgattcatgcctgaaatcccactactttgggaggctgaggctggagaattgcttgaggctagtgagctgtgactcccactgcactccagctcggggaacagagcgagaccttgtctctaaaaataatagtaataaaataaaaataacgttttatgactatttattgcaaggtcagagttacagattgttataaattgttgagaaatttttgtgattagaatatgaaggaaaaagctttgttggtaaaagtgacatgttaaggggctatgaagtaaatatgctgcagttaattatgctaagttaaaatacagtttagttatttgctttaaaataaactcttctttttttctttaaagtatactatctcaaaactcattatgttgtcagagccctagagctggctagtgtaacactgactatgagtaggtgggcccacacttgagttgaggtgatttcatggtgtctttccaggctcttgatagggtgtcactgcatgcaagccatgaatctgttttgagaatcctctccattttcccaaataaaaacctatcacaacagtgactatatcactcagcattggatctaaatataaaagtggtgctttcagtgtttttggcagatagtgttccataagctttccatcagaagggattttagacaccttagaggtccgtgctacatcgtcacagttcctccgaataaccttaggtggtagtgttacttgcctttgacacctctgcatatgttttaatgactagatccaaactgtgttgttcttaaatcaaaaattggataatttgtaatatttatgtgttaatcacacagtatgctctctgaagttctcttaagccttcagtttatactcttaatttaattttctttctgagctggagaactggctttgcactttggttacacagaacattggtttccaattcagtttaactgaaatttgctgctgatatgttgagtttgttctttaaaaaatagctcatatatctcatctttcctcctgtcttagaagaacagacctaactagtgaatgtattaatgaaaatgcatctatttcagagctgacatgaagagtttagtttttttactttataaactgtgaatatgagtatgccagctgcatacgatgtaactaatcatatttaaatatatttcactttctctttgactttagaccttttgaagtctgtataaacttgttttgaaatatagtctctgcttacgaatgtcataacaaaataattttttgcatgataaaaaattactttgattacaaaaggcatattctttcatggtttctgcaatgagaggaagtgtaatgattattttaatatttctattaaatatgtttaactgtatatttttatggctgctc
//
by
@meso_cacase at
DBCLS
This page is licensed under a
Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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