2024-03-29 22:20:37, GGRNA.v2 : RefSeq release 222 (Jan, 2024)
LOCUS NM_001382345 820 bp mRNA linear PRI 26-JUN-2023 DEFINITION Homo sapiens leucine twenty homeobox (LEUTX), transcript variant 1, mRNA. ACCESSION NM_001382345 VERSION NM_001382345.1 KEYWORDS RefSeq; MANE Select. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 820) AUTHORS Lewin TD, Blagrove JR and Holland PWH. TITLE Rapid Evolution of the Embryonically Expressed Homeobox Gene LEUTX within Primates JOURNAL Genome Biol Evol 15 (6) (2023) PUBMED 37232378 REMARK GeneRIF: Rapid Evolution of the Embryonically Expressed Homeobox Gene LEUTX within Primates. REFERENCE 2 (bases 1 to 820) AUTHORS Luck K, Kim DK, Lambourne L, Spirohn K, Begg BE, Bian W, Brignall R, Cafarelli T, Campos-Laborie FJ, Charloteaux B, Choi D, Cote AG, Daley M, Deimling S, Desbuleux A, Dricot A, Gebbia M, Hardy MF, Kishore N, Knapp JJ, Kovacs IA, Lemmens I, Mee MW, Mellor JC, Pollis C, Pons C, Richardson AD, Schlabach S, Teeking B, Yadav A, Babor M, Balcha D, Basha O, Bowman-Colin C, Chin SF, Choi SG, Colabella C, Coppin G, D'Amata C, De Ridder D, De Rouck S, Duran-Frigola M, Ennajdaoui H, Goebels F, Goehring L, Gopal A, Haddad G, Hatchi E, Helmy M, Jacob Y, Kassa Y, Landini S, Li R, van Lieshout N, MacWilliams A, Markey D, Paulson JN, Rangarajan S, Rasla J, Rayhan A, Rolland T, San-Miguel A, Shen Y, Sheykhkarimli D, Sheynkman GM, Simonovsky E, Tasan M, Tejeda A, Tropepe V, Twizere JC, Wang Y, Weatheritt RJ, Weile J, Xia Y, Yang X, Yeger-Lotem E, Zhong Q, Aloy P, Bader GD, De Las Rivas J, Gaudet S, Hao T, Rak J, Tavernier J, Hill DE, Vidal M, Roth FP and Calderwood MA. TITLE A reference map of the human binary protein interactome JOURNAL Nature 580 (7803), 402-408 (2020) PUBMED 32296183 REFERENCE 3 (bases 1 to 820) AUTHORS Jouhilahti EM, Madissoon E, Vesterlund L, Tohonen V, Krjutskov K, Plaza Reyes A, Petropoulos S, Mansson R, Linnarsson S, Burglin T, Lanner F, Hovatta O, Katayama S and Kere J. TITLE The human PRD-like homeobox gene LEUTX has a central role in embryo genome activation JOURNAL Development 143 (19), 3459-3469 (2016) PUBMED 27578796 REFERENCE 4 (bases 1 to 820) AUTHORS Vaquerizas JM, Kummerfeld SK, Teichmann SA and Luscombe NM. TITLE A census of human transcription factors: function, expression and evolution JOURNAL Nat Rev Genet 10 (4), 252-263 (2009) PUBMED 19274049 REMARK Review article REFERENCE 5 (bases 1 to 820) AUTHORS Holland PW, Booth HA and Bruford EA. TITLE Classification and nomenclature of all human homeobox genes JOURNAL BMC Biol 5, 47 (2007) PUBMED 17963489 REMARK Publication Status: Online-Only COMMENT VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AC005393.1. ##Evidence-Data-START## Transcript exon combination :: LN651090.1 [ECO:0000332] ##Evidence-Data-END## ##RefSeq-Attributes-START## MANE Ensembl match :: ENST00000638280.2/ ENSP00000491740.1 RefSeq Select criteria :: based on manual assertion, conservation, expression, longest protein ##RefSeq-Attributes-END## PRIMARY REFSEQ_SPAN PRIMARY_IDENTIFIER PRIMARY_SPAN COMP 1-74 AC005393.1 57951-58024 75-226 AC005393.1 63624-63775 227-820 AC005393.1 64795-65388 FEATURES Location/Qualifiers source 1..820 /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /chromosome="19" /map="19q13.2" gene 1..820 /gene="LEUTX" /note="leucine twenty homeobox" /db_xref="GeneID:342900" /db_xref="HGNC:HGNC:31953" /db_xref="MIM:618701" exon 1..74 /gene="LEUTX" /inference="alignment:Splign:2.1.0" variation 1 /gene="LEUTX" /replace="a" /replace="g" /db_xref="dbSNP:1967840629" variation 3 /gene="LEUTX" /replace="a" /replace="g" /db_xref="dbSNP:977020492" variation 4 /gene="LEUTX" /replace="c" /replace="g" /replace="t" /db_xref="dbSNP:1172148284" variation 5 /gene="LEUTX" /replace="a" /replace="g" /db_xref="dbSNP:978333460" variation 6 /gene="LEUTX" /replace="g" /replace="t" /db_xref="dbSNP:1294290895" variation 13 /gene="LEUTX" /replace="c" /replace="t" /db_xref="dbSNP:1438741272" variation 18 /gene="LEUTX" /replace="a" /replace="g" /db_xref="dbSNP:922817099" variation 23 /gene="LEUTX" /replace="c" /replace="g" /db_xref="dbSNP:1568514060" variation 24 /gene="LEUTX" /replace="" /replace="t" /db_xref="dbSNP:1343445420" variation 25 /gene="LEUTX" /replace="a" /replace="g" /db_xref="dbSNP:1967841191" variation 27 /gene="LEUTX" /replace="a" /replace="g" /db_xref="dbSNP:60983054" variation 30 /gene="LEUTX" /replace="a" /replace="c" /db_xref="dbSNP:1967841344" variation 33 /gene="LEUTX" /replace="c" /replace="g" /db_xref="dbSNP:1419010794" variation 34 /gene="LEUTX" /replace="a" /replace="g" /replace="t" /db_xref="dbSNP:985861208" variation 41 /gene="LEUTX" /replace="c" /replace="t" /db_xref="dbSNP:1380757377" variation 42 /gene="LEUTX" /replace="a" /replace="g" /db_xref="dbSNP:910000124" variation 50 /gene="LEUTX" /replace="c" /replace="t" /db_xref="dbSNP:1431180034" variation 52 /gene="LEUTX" /replace="a" /replace="g" /replace="t" /db_xref="dbSNP:1266266225" variation 53..55 /gene="LEUTX" /replace="tt" /replace="ttt" /db_xref="dbSNP:1191342145" variation 58 /gene="LEUTX" /replace="a" /replace="g" /db_xref="dbSNP:1489182982" variation 63 /gene="LEUTX" /replace="a" /replace="g" /replace="t" /db_xref="dbSNP:1239847800" variation 64 /gene="LEUTX" /replace="c" /replace="t" /db_xref="dbSNP:1216603320" CDS 68..664 /gene="LEUTX" /note="isoform 1 is encoded by transcript variant 1; putative leucine-twenty homeobox; arginine-fifty homeobox-like pseudogene; PRD-LIKE homeobox transcription factor LEUTX; paired-like homeobox transcription factor LEUTX; paired-like homeodomain transcription factor LEUTX" /codon_start=1 /product="paired-like homeodomain transcription factor LEUTX isoform 1" /protein_id="NP_001369274.1" /db_xref="CCDS:CCDS92615.1" /db_xref="GeneID:342900" /db_xref="HGNC:HGNC:31953" /db_xref="MIM:618701" /translation="
MFEGPRRYRRPRTRFLSKQLTALRELLEKTMHPSLATMGKLASKLQLDLSVVKIWFKNQRAKWKRQQRQQMQTRPSLGPANQTTSVKKEETPSAITTANIRPVSPGISDANDHDLREPSGIKNPGGASASARVSSWDSQSYDIEQICLGASNPPWASTLFEIDEFVKIYDLPGEDDTSSLNQYLFPVCLEYDQLQSSV"
misc_feature 110..259 /gene="LEUTX" /note="Homeodomain; Region: HOX; smart00389" /db_xref="CDD:197696" misc_feature 227..229 /gene="LEUTX" /note="Required for binding to the 5'-TAATCC-3' sequence. /evidence=ECO:0000269|PubMed:30479355; propagated from UniProtKB/Swiss-Prot (A8MZ59.4); other site" misc_feature 236..238 /gene="LEUTX" /note="Required for binding to the 5'-TAATCC-3' sequence. /evidence=ECO:0000269|PubMed:30479355; propagated from UniProtKB/Swiss-Prot (A8MZ59.4); other site" misc_feature 248..250 /gene="LEUTX" /note="Required for binding to the 5'-TAATCC-3' sequence. /evidence=ECO:0000269|PubMed:30479355; propagated from UniProtKB/Swiss-Prot (A8MZ59.4); other site" misc_feature 260..466 /gene="LEUTX" /note="propagated from UniProtKB/Swiss-Prot (A8MZ59.4); Region: Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite" misc_feature 302..637 /gene="LEUTX" /note="propagated from UniProtKB/Swiss-Prot (A8MZ59.4); Region: LEUTX region. /evidence=ECO:0000303|PubMed:30479355" misc_feature 440..475 /gene="LEUTX" /note="propagated from UniProtKB/Swiss-Prot (A8MZ59.4); Region: 9aaTAD. /evidence=ECO:0000303|PubMed:30479355" misc_feature 524..550 /gene="LEUTX" /note="propagated from UniProtKB/Swiss-Prot (A8MZ59.4); Region: 9aaTAD. /evidence=ECO:0000303|PubMed:30479355" misc_feature 554..580 /gene="LEUTX" /note="propagated from UniProtKB/Swiss-Prot (A8MZ59.4); Region: 9aaTAD. /evidence=ECO:0000303|PubMed:30479355" misc_feature 599..625 /gene="LEUTX" /note="propagated from UniProtKB/Swiss-Prot (A8MZ59.4); Region: 9aaTAD. /evidence=ECO:0000303|PubMed:30479355" variation 68 /gene="LEUTX" /replace="a" /replace="g" /db_xref="dbSNP:1967841710" variation 69 /gene="LEUTX" /replace="c" /replace="g" /replace="t" /db_xref="dbSNP:941435610" exon 75..226 /gene="LEUTX" /inference="alignment:Splign:2.1.0" variation 75 /gene="LEUTX" /replace="a" /replace="g" /db_xref="dbSNP:1174931156" variation 76 /gene="LEUTX" /replace="a" /replace="g" /replace="t" /db_xref="dbSNP:1206142093" variation 78 /gene="LEUTX" /replace="a" /replace="g" /db_xref="dbSNP:904697920" variation 79 /gene="LEUTX" /replace="a" /replace="g" /db_xref="dbSNP:764076145" variation 80 /gene="LEUTX" /replace="a" /replace="c" /db_xref="dbSNP:2144959424" variation 81 /gene="LEUTX" /replace="c" /replace="g" /db_xref="dbSNP:1296934443" variation 82 /gene="LEUTX" /replace="a" /replace="g" /db_xref="dbSNP:1967935438" variation 84 /gene="LEUTX" /replace="a" /replace="g" /db_xref="dbSNP:550435255" variation 85 /gene="LEUTX" /replace="a" /replace="g" /replace="t" /db_xref="dbSNP:1967935549" variation 86 /gene="LEUTX" /replace="c" /replace="t" /db_xref="dbSNP:761890692" variation 87 /gene="LEUTX" /replace="a" /replace="g" /db_xref="dbSNP:765232053" variation 90 /gene="LEUTX" /replace="a" /replace="g" /db_xref="dbSNP:1343737936" variation 92 /gene="LEUTX" /replace="c" /replace="t" /db_xref="dbSNP:1006879663" variation 93 /gene="LEUTX" /replace="a" /replace="c" /replace="g" /db_xref="dbSNP:17709621" variation 95 /gene="LEUTX" /replace="c" /replace="t" /db_xref="dbSNP:892042042" variation 96 /gene="LEUTX" /replace="a" /replace="c" /replace="g" /db_xref="dbSNP:758599556" variation 101 /gene="LEUTX" /replace="a" /replace="c" /replace="t" /db_xref="dbSNP:758420819" variation 102 /gene="LEUTX" /replace="a" /replace="g" /replace="t" /db_xref="dbSNP:117937250" variation 104 /gene="LEUTX" /replace="" /replace="a" /db_xref="dbSNP:1205789268" variation 104 /gene="LEUTX" /replace="a" /replace="g" /db_xref="dbSNP:1967936165" variation 106 /gene="LEUTX" /replace="a" /replace="t" /db_xref="dbSNP:751870403" variation 115 /gene="LEUTX" /replace="c" /replace="t" /db_xref="dbSNP:1431788324" variation 122 /gene="LEUTX" /replace="a" /replace="c" /replace="t" /db_xref="dbSNP:547099889" variation 124 /gene="LEUTX" /replace="a" /replace="g" /db_xref="dbSNP:1382641842" variation 125 /gene="LEUTX" /replace="c" /replace="t" /db_xref="dbSNP:755346374" variation 126 /gene="LEUTX" /replace="c" /replace="t" /db_xref="dbSNP:781608781" variation 127 /gene="LEUTX" /replace="a" /replace="c" /replace="g" /db_xref="dbSNP:1029602022" variation 129 /gene="LEUTX" /replace="c" /replace="t" /db_xref="dbSNP:954015458" variation 130 /gene="LEUTX" /replace="a" /replace="g" /db_xref="dbSNP:1167057699" variation 131 /gene="LEUTX" /replace="a" /replace="g" /db_xref="dbSNP:1461269777" variation 132 /gene="LEUTX" /replace="c" /replace="t" /db_xref="dbSNP:1389957036" variation 134 /gene="LEUTX" /replace="c" /replace="t" /db_xref="dbSNP:1430896975" variation 137 /gene="LEUTX" /replace="a" /replace="c" /replace="g" /db_xref="dbSNP:1310455385" variation 140 /gene="LEUTX" /replace="g" /replace="t" /db_xref="dbSNP:1967936915" variation 143 /gene="LEUTX" /replace="c" /replace="t" /db_xref="dbSNP:1967936954" variation 147 /gene="LEUTX" /replace="a" /replace="t" /db_xref="dbSNP:1967936997" variation 154 /gene="LEUTX" /replace="a" /replace="c" /replace="g" /db_xref="dbSNP:565401736" variation 155 /gene="LEUTX" /replace="a" /replace="g" /db_xref="dbSNP:1967937102" variation 156 /gene="LEUTX" /replace="a" /replace="c" /db_xref="dbSNP:1435894960" variation 157 /gene="LEUTX" /replace="c" /replace="g" /replace="t" /db_xref="dbSNP:756701054" variation 160 /gene="LEUTX" /replace="a" /replace="g" /replace="t" /db_xref="dbSNP:1369935668" variation 161 /gene="LEUTX" /replace="c" /replace="g" /db_xref="dbSNP:1967937296" variation 162 /gene="LEUTX" /replace="a" /replace="g" /db_xref="dbSNP:544666908" variation 164 /gene="LEUTX" /replace="c" /replace="t" /db_xref="dbSNP:745474654" variation 165 /gene="LEUTX" /replace="c" /replace="g" /db_xref="dbSNP:745425368" variation 166 /gene="LEUTX" /replace="a" /replace="c" /db_xref="dbSNP:1381240920" variation 168 /gene="LEUTX" /replace="a" /replace="g" /db_xref="dbSNP:1229036725" variation 171 /gene="LEUTX" /replace="c" /replace="t" /db_xref="dbSNP:1568515577" variation 175 /gene="LEUTX" /replace="c" /replace="t" /db_xref="dbSNP:1276738142" variation 178 /gene="LEUTX" /replace="a" /replace="c" /db_xref="dbSNP:1449355846" variation 180 /gene="LEUTX" /replace="c" /replace="t" /db_xref="dbSNP:1967937712" variation 182 /gene="LEUTX" /replace="a" /replace="c" /replace="g" /db_xref="dbSNP:771812228" variation 183 /gene="LEUTX" /replace="a" /replace="c" /replace="g" /replace="t" /db_xref="dbSNP:1386263261" variation 186 /gene="LEUTX" /replace="a" /replace="g" /db_xref="dbSNP:1254515532" variation 189 /gene="LEUTX" /replace="" /replace="t" /db_xref="dbSNP:35726156" variation 189 /gene="LEUTX" /replace="g" /replace="t" /db_xref="dbSNP:1967937891" variation 191 /gene="LEUTX" /replace="a" /replace="g" /db_xref="dbSNP:868853266" variation 192 /gene="LEUTX" /replace="a" /replace="c" /replace="t" /db_xref="dbSNP:1246816729" variation 194 /gene="LEUTX" /replace="g" /replace="t" /db_xref="dbSNP:1486135413" variation 195 /gene="LEUTX" /replace="c" /replace="t" /db_xref="dbSNP:1599618457" variation 200 /gene="LEUTX" /replace="c" /replace="t" /db_xref="dbSNP:1489220786" variation 204 /gene="LEUTX" /replace="a" /replace="t" /db_xref="dbSNP:1282714813" variation 205 /gene="LEUTX" /replace="a" /replace="t" /db_xref="dbSNP:1186298033" variation 217 /gene="LEUTX" /replace="c" /replace="t" /db_xref="dbSNP:866030454" variation 218 /gene="LEUTX" /replace="a" /replace="g" /replace="t" /db_xref="dbSNP:117228099" variation 226 /gene="LEUTX" /replace="a" /replace="g" /db_xref="dbSNP:866067011" exon 227..820 /gene="LEUTX" /inference="alignment:Splign:2.1.0" variation 229 /gene="LEUTX" /replace="c" /replace="g" /replace="t" /db_xref="dbSNP:954443066" variation 232 /gene="LEUTX" /replace="g" /replace="t" /db_xref="dbSNP:1967957639" variation 233 /gene="LEUTX" /replace="c" /replace="g" /replace="t" /db_xref="dbSNP:867912521" variation 235 /gene="LEUTX" /replace="c" /replace="t" /db_xref="dbSNP:565258087" variation 239 /gene="LEUTX" /replace="a" /replace="g" /db_xref="dbSNP:2144961005" variation 241 /gene="LEUTX" /replace="c" /replace="t" /db_xref="dbSNP:1419070812" variation 242 /gene="LEUTX" /replace="a" /replace="c" /replace="t" /db_xref="dbSNP:1356786130" variation 243 /gene="LEUTX" /replace="a" /replace="g" /db_xref="dbSNP:1967958057" variation 245 /gene="LEUTX" /replace="a" /replace="c" /replace="t" /db_xref="dbSNP:577142991" variation 246 /gene="LEUTX" /replace="a" /replace="c" /replace="g" /db_xref="dbSNP:985819903" variation 249 /gene="LEUTX" /replace="c" /replace="t" /db_xref="dbSNP:541307025" variation 254 /gene="LEUTX" /replace="a" /replace="t" /db_xref="dbSNP:745314487" variation 257 /gene="LEUTX" /replace="a" /replace="g" /db_xref="dbSNP:1276876464" variation 258 /gene="LEUTX" /replace="a" /replace="g" /db_xref="dbSNP:1433627107" variation 268 /gene="LEUTX" /replace="a" /replace="g" /db_xref="dbSNP:1967958689" variation 269 /gene="LEUTX" /replace="a" /replace="c" /replace="t" /db_xref="dbSNP:376692805" variation 270 /gene="LEUTX" /replace="a" /replace="g" /replace="t" /db_xref="dbSNP:1188849504" variation 271 /gene="LEUTX" /replace="c" /replace="g" /db_xref="dbSNP:974354701" variation 279 /gene="LEUTX" /replace="a" /replace="t" /db_xref="dbSNP:1599618995" variation 281 /gene="LEUTX" /replace="c" /replace="t" /db_xref="dbSNP:1372961791" variation 283 /gene="LEUTX" /replace="c" /replace="g" /db_xref="dbSNP:1427766096" variation 285 /gene="LEUTX" /replace="c" /replace="t" /db_xref="dbSNP:1471909900" variation 287 /gene="LEUTX" /replace="c" /replace="t" /db_xref="dbSNP:558962748" variation 288 /gene="LEUTX" /replace="a" /replace="g" /db_xref="dbSNP:921339184" variation 289 /gene="LEUTX" /replace="g" /replace="t" /db_xref="dbSNP:920170515" variation 291 /gene="LEUTX" /replace="c" /replace="t" /db_xref="dbSNP:930028774" variation 293 /gene="LEUTX" /replace="c" /replace="t" /db_xref="dbSNP:1171100356" variation 296 /gene="LEUTX" /replace="a" /replace="c" /db_xref="dbSNP:1399794612" variation 297 /gene="LEUTX" /replace="c" /replace="t" /db_xref="dbSNP:1967959742" variation 301 /gene="LEUTX" /replace="a" /replace="g" /db_xref="dbSNP:1967959827" variation 309 /gene="LEUTX" /replace="a" /replace="c" /db_xref="dbSNP:1599619038" variation 312 /gene="LEUTX" /replace="a" /replace="c" /replace="g" /db_xref="dbSNP:369685173" variation 314..318 /gene="LEUTX" /replace="ac" /replace="acaac" /db_xref="dbSNP:759722545" variation 316 /gene="LEUTX" /replace="a" /replace="g" /db_xref="dbSNP:1377141308" variation 318 /gene="LEUTX" /replace="c" /replace="t" /db_xref="dbSNP:1360837594" variation 319 /gene="LEUTX" /replace="c" /replace="t" /db_xref="dbSNP:2144961159" variation 321 /gene="LEUTX" /replace="c" /replace="t" /db_xref="dbSNP:768484764" variation 322 /gene="LEUTX" /replace="a" /replace="c" /db_xref="dbSNP:1287083640" variation 325..331 /gene="LEUTX" /replace="gaag" /replace="gaagaag" /db_xref="dbSNP:1967960526" variation 325 /gene="LEUTX" /replace="a" /replace="g" /db_xref="dbSNP:1967960460" variation 330..337 /gene="LEUTX" /replace="aggag" /replace="aggaggag" /db_xref="dbSNP:1967960669" variation 330 /gene="LEUTX" /replace="a" /replace="g" /db_xref="dbSNP:1350583721" variation 333 /gene="LEUTX" /replace="a" /replace="c" /db_xref="dbSNP:776270599" variation 338 /gene="LEUTX" /replace="a" /replace="c" /db_xref="dbSNP:1599619058" variation 340 /gene="LEUTX" /replace="c" /replace="t" /db_xref="dbSNP:748018606" variation 341 /gene="LEUTX" /replace="a" /replace="c" /db_xref="dbSNP:529686425" variation 342 /gene="LEUTX" /replace="c" /replace="t" /db_xref="dbSNP:773212414" variation 343 /gene="LEUTX" /replace="c" /replace="t" /db_xref="dbSNP:762950974" variation 344 /gene="LEUTX" /replace="c" /replace="t" /db_xref="dbSNP:766439043" variation 350 /gene="LEUTX" /replace="a" /replace="g" /replace="t" /db_xref="dbSNP:774471747" variation 351 /gene="LEUTX" /replace="c" /replace="t" /db_xref="dbSNP:1568515922" variation 353 /gene="LEUTX" /replace="a" /replace="g" /db_xref="dbSNP:1967961548" variation 356 /gene="LEUTX" /replace="a" /replace="g" /db_xref="dbSNP:1205094928" variation 358 /gene="LEUTX" /replace="a" /replace="t" /db_xref="dbSNP:1252614069" variation 365 /gene="LEUTX" /replace="a" /replace="g" /db_xref="dbSNP:949468596" variation 368 /gene="LEUTX" /replace="c" /replace="g" /replace="t" /db_xref="dbSNP:547985951" variation 369 /gene="LEUTX" /replace="a" /replace="g" /db_xref="dbSNP:373629971" variation 370 /gene="LEUTX" /replace="c" /replace="t" /db_xref="dbSNP:1433729412" variation 374 /gene="LEUTX" /replace="a" /replace="g" /db_xref="dbSNP:752965786" variation 378 /gene="LEUTX" /replace="a" /replace="g" /db_xref="dbSNP:1007829942" variation 384 /gene="LEUTX" /replace="a" /replace="g" /db_xref="dbSNP:1967962256" variation 387 /gene="LEUTX" /replace="c" /replace="t" /db_xref="dbSNP:1335649833" variation 388 /gene="LEUTX" /replace="a" /replace="c" /db_xref="dbSNP:1478490092" variation 390 /gene="LEUTX" /replace="c" /replace="t" /db_xref="dbSNP:1967962488" variation 392 /gene="LEUTX" /replace="a" /replace="g" /db_xref="dbSNP:1389153952" variation 394 /gene="LEUTX" /replace="a" /replace="c" /replace="g" /replace="t" /db_xref="dbSNP:1045146578" variation 396 /gene="LEUTX" /replace="c" /replace="t" /db_xref="dbSNP:1967962678" variation 398 /gene="LEUTX" /replace="a" /replace="g" /db_xref="dbSNP:1018177288" variation 399 /gene="LEUTX" /replace="a" /replace="t" /db_xref="dbSNP:1967962832" variation 400 /gene="LEUTX" /replace="a" /replace="t" /db_xref="dbSNP:1467590586" variation 402 /gene="LEUTX" /replace="a" /replace="g" /db_xref="dbSNP:1967962984" variation 403 /gene="LEUTX" /replace="a" /replace="c" /replace="t" /db_xref="dbSNP:1396666017" variation 404 /gene="LEUTX" /replace="c" /replace="g" /db_xref="dbSNP:1360819571" variation 407 /gene="LEUTX" /replace="g" /replace="t" /db_xref="dbSNP:1416147298" variation 408 /gene="LEUTX" /replace="a" /replace="g" /db_xref="dbSNP:577998458" variation 409 /gene="LEUTX" /replace="g" /replace="t" /db_xref="dbSNP:1967963424" variation 410 /gene="LEUTX" /replace="c" /replace="t" /db_xref="dbSNP:1164609257" variation 413 /gene="LEUTX" /replace="c" /replace="t" /db_xref="dbSNP:905037976" variation 414 /gene="LEUTX" /replace="a" /replace="g" /db_xref="dbSNP:1370631091" variation 418 /gene="LEUTX" /replace="a" /replace="g" /db_xref="dbSNP:764100102" variation 419 /gene="LEUTX" /replace="c" /replace="t" /db_xref="dbSNP:1179793433" variation 421 /gene="LEUTX" /replace="c" /replace="t" /db_xref="dbSNP:1967963892" variation 425 /gene="LEUTX" /replace="c" /replace="g" /db_xref="dbSNP:1967963968" variation 428 /gene="LEUTX" /replace="a" /replace="g" /db_xref="dbSNP:1967964041" variation 430 /gene="LEUTX" /replace="c" /replace="t" /db_xref="dbSNP:764451393" variation 431 /gene="LEUTX" /replace="a" /replace="g" /db_xref="dbSNP:141754227" variation 433 /gene="LEUTX" /replace="c" /replace="g" /replace="t" /db_xref="dbSNP:552374784" variation 436 /gene="LEUTX" /replace="a" /replace="t" /db_xref="dbSNP:1967964219" variation 437 /gene="LEUTX" /replace="c" /replace="t" /db_xref="dbSNP:1967964267" variation 440 /gene="LEUTX" /replace="a" /replace="g" /db_xref="dbSNP:1000694517" variation 443 /gene="LEUTX" /replace="a" /replace="g" /db_xref="dbSNP:1967964347" variation 444 /gene="LEUTX" /replace="a" /replace="g" /db_xref="dbSNP:1967964392" variation 445 /gene="LEUTX" /replace="a" /replace="g" /db_xref="dbSNP:1967964435" variation 447 /gene="LEUTX" /replace="c" /replace="g" /replace="t" /db_xref="dbSNP:757909677" variation 451 /gene="LEUTX" /replace="c" /replace="g" /replace="t" /db_xref="dbSNP:147098601" variation 452 /gene="LEUTX" /replace="a" /replace="g" /replace="t" /db_xref="dbSNP:751166546" variation 454 /gene="LEUTX" /replace="c" /replace="t" /db_xref="dbSNP:1228309124" variation 456 /gene="LEUTX" /replace="c" /replace="t" /db_xref="dbSNP:1276027256" variation 459 /gene="LEUTX" /replace="c" /replace="t" /db_xref="dbSNP:754558994" variation 460 /gene="LEUTX" /replace="a" /replace="g" /db_xref="dbSNP:1967964976" variation 463 /gene="LEUTX" /replace="c" /replace="g" /replace="t" /db_xref="dbSNP:534950736" variation 464 /gene="LEUTX" /replace="a" /replace="g" /db_xref="dbSNP:2144961449" variation 469 /gene="LEUTX" /replace="a" /replace="g" /db_xref="dbSNP:1285559831" variation 474 /gene="LEUTX" /replace="a" /replace="c" /replace="g" /db_xref="dbSNP:1009258079" variation 475 /gene="LEUTX" /replace="g" /replace="t" /db_xref="dbSNP:2144961463" variation 487..490 /gene="LEUTX" /replace="at" /replace="atat" /db_xref="dbSNP:1967965341" variation 487 /gene="LEUTX" /replace="a" /replace="g" /db_xref="dbSNP:1568515977" variation 488 /gene="LEUTX" /replace="c" /replace="t" /db_xref="dbSNP:1184597877" variation 489 /gene="LEUTX" /replace="a" /replace="g" /db_xref="dbSNP:1266794429" variation 490 /gene="LEUTX" /replace="a" /replace="t" /db_xref="dbSNP:1599619189" variation 491 /gene="LEUTX" /replace="a" /replace="g" /db_xref="dbSNP:1452329189" variation 493 /gene="LEUTX" /replace="c" /replace="t" /db_xref="dbSNP:1967965704" variation 494 /gene="LEUTX" /replace="a" /replace="g" /db_xref="dbSNP:1599619194" variation 499 /gene="LEUTX" /replace="a" /replace="g" /db_xref="dbSNP:1967965805" variation 500 /gene="LEUTX" /replace="c" /replace="t" /db_xref="dbSNP:1967965858" variation 502 /gene="LEUTX" /replace="a" /replace="g" /db_xref="dbSNP:1967965929" variation 506 /gene="LEUTX" /replace="c" /replace="t" /db_xref="dbSNP:1967965988" variation 508 /gene="LEUTX" /replace="a" /replace="t" /db_xref="dbSNP:1967966055" variation 509..510 /gene="LEUTX" /replace="" /replace="a" /db_xref="dbSNP:1201296508" variation 510 /gene="LEUTX" /replace="a" /replace="t" /db_xref="dbSNP:1254633068" variation 512 /gene="LEUTX" /replace="c" /replace="g" /db_xref="dbSNP:1967966281" variation 513 /gene="LEUTX" /replace="g" /replace="t" /db_xref="dbSNP:2144961536" variation 514 /gene="LEUTX" /replace="a" /replace="g" /db_xref="dbSNP:1236338316" variation 516..519 /gene="LEUTX" /replace="c" /replace="cttc" /db_xref="dbSNP:532813481" variation 516 /gene="LEUTX" /replace="a" /replace="c" /db_xref="dbSNP:957016374" variation 519 /gene="LEUTX" /replace="a" /replace="c" /db_xref="dbSNP:1331349028" variation 523 /gene="LEUTX" /replace="a" /replace="t" /db_xref="dbSNP:1568515991" variation 524 /gene="LEUTX" /replace="a" /replace="c" /db_xref="dbSNP:1029970572" variation 529 /gene="LEUTX" /replace="a" /replace="c" /replace="t" /db_xref="dbSNP:954349240" variation 530 /gene="LEUTX" /replace="c" /replace="t" /db_xref="dbSNP:1463490956" variation 531 /gene="LEUTX" /replace="a" /replace="g" /db_xref="dbSNP:780917699" variation 535 /gene="LEUTX" /replace="c" /replace="t" /db_xref="dbSNP:1389408322" variation 536 /gene="LEUTX" /replace="g" /replace="t" /db_xref="dbSNP:1967966998" variation 537 /gene="LEUTX" /replace="a" /replace="c" /db_xref="dbSNP:1967967068" variation 540..545 /gene="LEUTX" /replace="ctct" /replace="ctctct" /db_xref="dbSNP:1967967220" variation 540 /gene="LEUTX" /replace="a" /replace="c" /db_xref="dbSNP:1386980617" variation 541 /gene="LEUTX" /replace="a" /replace="t" /db_xref="dbSNP:1406285883" variation 542 /gene="LEUTX" /replace="a" /replace="c" /replace="g" /db_xref="dbSNP:1327583981" variation 545..547 /gene="LEUTX" /replace="tt" /replace="ttt" /db_xref="dbSNP:1967967519" variation 545 /gene="LEUTX" /replace="c" /replace="t" /db_xref="dbSNP:1363436378" variation 547 /gene="LEUTX" /replace="c" /replace="t" /db_xref="dbSNP:1967967588" variation 551 /gene="LEUTX" /replace="a" /replace="g" /db_xref="dbSNP:1416307341" variation 552 /gene="LEUTX" /replace="c" /replace="g" /replace="t" /db_xref="dbSNP:750419185" variation 553 /gene="LEUTX" /replace="a" /replace="c" /db_xref="dbSNP:376613498" variation 554 /gene="LEUTX" /replace="a" /replace="c" /replace="g" /db_xref="dbSNP:1427104510" variation 555 /gene="LEUTX" /replace="a" /replace="t" /db_xref="dbSNP:1180547336" variation 557 /gene="LEUTX" /replace="a" /replace="g" /db_xref="dbSNP:980758380" variation 559 /gene="LEUTX" /replace="a" /replace="c" /db_xref="dbSNP:1243255523" variation 565 /gene="LEUTX" /replace="a" /replace="g" /db_xref="dbSNP:1264880145" variation 568 /gene="LEUTX" /replace="a" /replace="g" /db_xref="dbSNP:1357210705" variation 569 /gene="LEUTX" /replace="a" /replace="c" /db_xref="dbSNP:1967968124" variation 571 /gene="LEUTX" /replace="c" /replace="t" /db_xref="dbSNP:1967968162" variation 573 /gene="LEUTX" /replace="a" /replace="g" /db_xref="dbSNP:2144961722" variation 574 /gene="LEUTX" /replace="c" /replace="t" /db_xref="dbSNP:1967968208" variation 577 /gene="LEUTX" /replace="c" /replace="g" /db_xref="dbSNP:1251038143" variation 579 /gene="LEUTX" /replace="a" /replace="t" /db_xref="dbSNP:1318339105" variation 580 /gene="LEUTX" /replace="c" /replace="g" /replace="t" /db_xref="dbSNP:926899678" variation 583 /gene="LEUTX" /replace="a" /replace="g" /db_xref="dbSNP:1266514469" variation 585 /gene="LEUTX" /replace="a" /replace="g" /db_xref="dbSNP:777493010" variation 587 /gene="LEUTX" /replace="g" /replace="t" /db_xref="dbSNP:1187643338" variation 595 /gene="LEUTX" /replace="c" /replace="t" /db_xref="dbSNP:1221719724" variation 596 /gene="LEUTX" /replace="a" /replace="c" /db_xref="dbSNP:61995735" variation 598 /gene="LEUTX" /replace="c" /replace="t" /db_xref="dbSNP:1967968672" variation 600 /gene="LEUTX" /replace="a" /replace="g" /db_xref="dbSNP:1967968711" variation 607..609 /gene="LEUTX" /replace="a" /replace="aa" /replace="aaa" /db_xref="dbSNP:1038281537" variation 609 /gene="LEUTX" /replace="a" /replace="g" /db_xref="dbSNP:919404875" variation 611 /gene="LEUTX" /replace="c" /replace="t" /db_xref="dbSNP:1223279190" variation 612 /gene="LEUTX" /replace="a" /replace="g" /db_xref="dbSNP:1967968938" variation 613 /gene="LEUTX" /replace="a" /replace="g" /replace="t" /db_xref="dbSNP:540263352" variation 615 /gene="LEUTX" /replace="a" /replace="g" /db_xref="dbSNP:770903563" variation 622 /gene="LEUTX" /replace="c" /replace="t" /db_xref="dbSNP:774382036" variation 626 /gene="LEUTX" /replace="a" /replace="g" /db_xref="dbSNP:1369477917" variation 629 /gene="LEUTX" /replace="c" /replace="t" /db_xref="dbSNP:1967969193" variation 630 /gene="LEUTX" /replace="a" /replace="g" /db_xref="dbSNP:147692654" variation 633 /gene="LEUTX" /replace="a" /replace="t" /db_xref="dbSNP:1967969226" variation 636 /gene="LEUTX" /replace="a" /replace="g" /db_xref="dbSNP:1967969265" variation 639 /gene="LEUTX" /replace="a" /replace="g" /db_xref="dbSNP:772138251" variation 643 /gene="LEUTX" /replace="a" /replace="c" /replace="t" /db_xref="dbSNP:571718226" variation 645 /gene="LEUTX" /replace="a" /replace="c" /db_xref="dbSNP:1456411197" variation 646 /gene="LEUTX" /replace="a" /replace="c" /replace="g" /replace="t" /db_xref="dbSNP:377434841" variation 649 /gene="LEUTX" /replace="c" /replace="t" /db_xref="dbSNP:760881319" variation 652 /gene="LEUTX" /replace="a" /replace="g" /db_xref="dbSNP:1394784233" variation 653 /gene="LEUTX" /replace="g" /replace="t" /db_xref="dbSNP:930205289" variation 654 /gene="LEUTX" /replace="a" /replace="c" /db_xref="dbSNP:1312714851" variation 657 /gene="LEUTX" /replace="c" /replace="t" /db_xref="dbSNP:1361360322" variation 660..666 /gene="LEUTX" /replace="t" /replace="tgtaact" /db_xref="dbSNP:1341107441" variation 660 /gene="LEUTX" /replace="c" /replace="g" /replace="t" /db_xref="dbSNP:1235267912" variation 664 /gene="LEUTX" /replace="a" /replace="t" /db_xref="dbSNP:1967969927" variation 674 /gene="LEUTX" /replace="c" /replace="t" /db_xref="dbSNP:200128724" variation 676 /gene="LEUTX" /replace="c" /replace="t" /db_xref="dbSNP:1328671520" variation 682 /gene="LEUTX" /replace="a" /replace="c" /replace="t" /db_xref="dbSNP:1209612488" variation 685 /gene="LEUTX" /replace="g" /replace="t" /db_xref="dbSNP:1315380437" variation 686 /gene="LEUTX" /replace="a" /replace="g" /db_xref="dbSNP:983001717" variation 688 /gene="LEUTX" /replace="a" /replace="g" /db_xref="dbSNP:917940016" variation 692 /gene="LEUTX" /replace="c" /replace="t" /db_xref="dbSNP:1486764820" variation 694 /gene="LEUTX" /replace="c" /replace="t" /db_xref="dbSNP:949323487" variation 695 /gene="LEUTX" /replace="c" /replace="g" /db_xref="dbSNP:1967970410" variation 698 /gene="LEUTX" /replace="c" /replace="t" /db_xref="dbSNP:1967970459" variation 701 /gene="LEUTX" /replace="a" /replace="g" /db_xref="dbSNP:1039342704" variation 703 /gene="LEUTX" /replace="c" /replace="t" /db_xref="dbSNP:1198632609" variation 707 /gene="LEUTX" /replace="c" /replace="t" /db_xref="dbSNP:1490470412" variation 710 /gene="LEUTX" /replace="a" /replace="g" /db_xref="dbSNP:1213326235" variation 713 /gene="LEUTX" /replace="c" /replace="g" /replace="t" /db_xref="dbSNP:1255450378" variation 714..717 /gene="LEUTX" /replace="at" /replace="atat" /db_xref="dbSNP:745927165" variation 714 /gene="LEUTX" /replace="a" /replace="c" /replace="g" /db_xref="dbSNP:754316195" variation 720 /gene="LEUTX" /replace="a" /replace="c" /db_xref="dbSNP:1599619349" variation 721 /gene="LEUTX" /replace="c" /replace="t" /db_xref="dbSNP:905277512" variation 724 /gene="LEUTX" /replace="a" /replace="t" /db_xref="dbSNP:570106042" variation 726 /gene="LEUTX" /replace="" /replace="a" /db_xref="dbSNP:1967971091" variation 726 /gene="LEUTX" /replace="a" /replace="g" /db_xref="dbSNP:1967971030" variation 733 /gene="LEUTX" /replace="a" /replace="g" /db_xref="dbSNP:1967971140" variation 735 /gene="LEUTX" /replace="a" /replace="g" /db_xref="dbSNP:1967971197" variation 737 /gene="LEUTX" /replace="g" /replace="t" /db_xref="dbSNP:1054016006" variation 740 /gene="LEUTX" /replace="a" /replace="g" /db_xref="dbSNP:779949872" variation 741 /gene="LEUTX" /replace="a" /replace="g" /db_xref="dbSNP:1000704423" variation 742 /gene="LEUTX" /replace="a" /replace="c" /replace="t" /db_xref="dbSNP:149172013" variation 745 /gene="LEUTX" /replace="c" /replace="t" /db_xref="dbSNP:2144962024" variation 746 /gene="LEUTX" /replace="a" /replace="g" /db_xref="dbSNP:1278913490" variation 747 /gene="LEUTX" /replace="a" /replace="g" /db_xref="dbSNP:754764564" variation 749 /gene="LEUTX" /replace="a" /replace="c" /db_xref="dbSNP:1967971651" variation 751 /gene="LEUTX" /replace="a" /replace="g" /db_xref="dbSNP:2144962037" variation 758 /gene="LEUTX" /replace="c" /replace="t" /db_xref="dbSNP:890128733" variation 760 /gene="LEUTX" /replace="" /replace="a" /db_xref="dbSNP:1967971797" variation 760 /gene="LEUTX" /replace="a" /replace="c" /db_xref="dbSNP:1967971748" variation 762 /gene="LEUTX" /replace="g" /replace="t" /db_xref="dbSNP:1268815042" variation 764 /gene="LEUTX" /replace="a" /replace="g" /db_xref="dbSNP:1430438609" variation 767 /gene="LEUTX" /replace="a" /replace="g" /db_xref="dbSNP:1007172408" variation 771 /gene="LEUTX" /replace="a" /replace="g" /db_xref="dbSNP:1967972047" variation 778 /gene="LEUTX" /replace="c" /replace="t" /db_xref="dbSNP:1300273914" variation 784 /gene="LEUTX" /replace="c" /replace="t" /db_xref="dbSNP:1017347286" variation 788 /gene="LEUTX" /replace="g" /replace="t" /db_xref="dbSNP:1374941392" variation 789..794 /gene="LEUTX" /replace="aaaa" /replace="aaaaaa" /replace="aaaaaaa" /db_xref="dbSNP:1176829768" variation 790 /gene="LEUTX" /replace="a" /replace="g" /db_xref="dbSNP:1414993786" variation 794 /gene="LEUTX" /replace="a" /replace="t" /db_xref="dbSNP:558758474" variation 795 /gene="LEUTX" /replace="a" /replace="c" /db_xref="dbSNP:1025090522" regulatory 796..801 /regulatory_class="polyA_signal_sequence" /gene="LEUTX" /note="hexamer: AATAAA" variation 802 /gene="LEUTX" /replace="a" /replace="g" /db_xref="dbSNP:1967972519" variation 806 /gene="LEUTX" /replace="c" /replace="t" /db_xref="dbSNP:2144962093" variation 808 /gene="LEUTX" /replace="c" /replace="t" /db_xref="dbSNP:995717704" variation 810 /gene="LEUTX" /replace="c" /replace="t" /db_xref="dbSNP:1477368176" variation 811 /gene="LEUTX" /replace="c" /replace="g" /replace="t" /db_xref="dbSNP:1967972614" variation 812 /gene="LEUTX" /replace="c" /replace="t" /db_xref="dbSNP:1027578906" variation 815 /gene="LEUTX" /replace="c" /replace="t" /db_xref="dbSNP:1263525118" polyA_site 820 /gene="LEUTX" /note="major polyA site" ORIGIN
acatagactcagctcaggagctctgcagcacacagctgatcgaacccactcatttctagaggacaccatgtttgaagggccaaggcgttatcgtcggccacgcacaagatttctctccaaacaactcacagcattgagagaattgcttgaaaagaccatgcacccaagtttggctacaatggggaaactggcttcaaagctacaacttgatctatccgtagtaaagatctggttcaagaaccagcgtgccaaatggaagaggcagcagcggcagcaaatgcagacacggccatcactagggccagcaaaccagacaacttcagtgaagaaggaggagactccctcagccataactactgcaaacattcgtccagtaagtcctggaatctctgatgcaaatgaccatgatctacgtgagccttctggtatcaagaatcctggaggagccagcgcctctgcgagggtttcatcctgggattctcagtcatatgacattgaacagatatgtctgggggcttcaaatcctccttgggcctccactctctttgaaatagatgaatttgtaaagatctatgacttgccaggggaagatgacaccagcagcctaaatcaatatctttttccagtatgccttgagtatgaccagctccaatcttcagtgtaacttcttacacatcacttctaggggaggtctggatctgacccactgagacatatttccacacatctttaatggtttgaccccagtctaagtagatcaggggctgggaatttatctttttctgtagaaaaaacaataaaggaactcccctacctttca
//
by
@meso_cacase at
DBCLS
This page is licensed under a
Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
[Full Text]