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Previous release (v1)
2026-10-15 19:17:13, GGRNA.v2 : RefSeq release 233 (Jan, 2026)
LOCUS XR_005850376 7040 bp RNA linear VRT 01-MAR-2022
DEFINITION PREDICTED: Gallus gallus uncharacterized LOC107053345
(LOC107053345), ncRNA.
ACCESSION XR_005850376
VERSION XR_005850376.2
DBLINK BioProject: PRJNA698614
KEYWORDS RefSeq.
SOURCE Gallus gallus (chicken)
ORGANISM Gallus gallus
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes;
Phasianidae; Phasianinae; Gallus.
COMMENT MODEL REFSEQ: This record is predicted by automated computational
analysis. This record is derived from a genomic sequence
(NC_052577.1) annotated using gene prediction method: Gnomon.
Also see:
Documentation of NCBI's Annotation Process
On Mar 1, 2022 this sequence version replaced XR_005850376.1.
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Name :: Gallus gallus Annotation Release 106
Annotation Version :: 106
Annotation Pipeline :: NCBI eukaryotic genome annotation
pipeline
Annotation Software Version :: 9.0
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
FEATURES Location/Qualifiers
source 1..7040
/organism="Gallus gallus"
/mol_type="transcribed RNA"
/isolate="bGalGal1"
/db_xref="taxon:9031"
/chromosome="5"
/sex="female"
/tissue_type="blood"
/geo_loc_name="USA: Fayetteville"
/lat_lon="36.0822 N 94.1719 W"
/collection_date="20-May-2019"
/collected_by="Nick Anthony"
gene 1..7040
/gene="LOC107053345"
/note="Derived by automated computational analysis using
gene prediction method: Gnomon. Supporting evidence
includes similarity to: 73 long SRA reads, and 100%
coverage of the annotated genomic feature by RNAseq
alignments, including 30 samples with support for all
annotated introns"
/db_xref="CGNC:76338"
/db_xref="GeneID:107053345"
ncRNA 1..7040
/ncRNA_class="lncRNA"
/gene="LOC107053345"
/product="uncharacterized LOC107053345"
/experiment="COORDINATES: polyA evidence [ECO:0006239]"
/db_xref="GeneID:107053345"
/db_xref="CGNC:76338"
ORIGIN
cctgtgtgaaaagcagtgatagtttatggatattaattcaataatatctagtttgcttttcatggtctttacttagatattcttccactaatttagaatttcgcatagcgaaaacattctatctggctttatcaatatttttgtggtaatatttattcctgcatcctcctcatattctgctaaaacacctagtttagttatgaattcatcaaggctcaatcatcagtaacatgaatatccaaaaagaggagagtggagatttttttgaaccactaaggacatcatctttacagaacttgggtggtaagaacacaagtgatgtttttagttggatcatcaggaagcacagcagtgcaacacaacaaaaataactggtgatgtcaaagccttcctccagcctcactgctcgttctcgtataggtgcttaaaaaaaatctaatggttcagcagtgtaacatttctgtcccctaaacatgtgttttgagtaactgcctacaacgtattataaaagcaatgagatgcatgctcactgcatctatctcaaaaaaaaaaagtgttcttcaagaacacataaaaagatgctaagatgtgttagatcttttgcggggtagcatgaatggcaacaaagaactgaaccctgggcttacacatgtaaatctgagttctttctcctgaaaaagtgcaggtgcacagagctgcacttggatgaggcaaggcctttctttatcaagttctcctaggcaccaactaagcatcactggaagttcccttaaaatgaacggcaatcatttggttttggaatgacattatatgcatccacatggcatcagtaaatatttaagtttggaatttataacatccatactgtaataggaaagcacattagtagaggacatcatgttgtgttaattagctgtaattatgatgcaggctccctatttggcaccaattcaacaaaaatgtgatcactataactcatacgaacgaggagcatcagaaaatacacctaactgagtttaatggaaatctacaagcatcaaaaaatcaattagcacacattaaccctaattaacaaatgcaaatgagatgctgattaactttctgaagaaggctgctgataataccagattaaatgtggacatgttagggcgattcagttgacacagataatgctaccgctggcctaagttgtcagcattaataaaacaacaaattgtaacaaactgatgccacctgtaggagccttcattgcacagctcacatagactgattttaattggtcctgatccaagtaaagctgattttgcaacagctctgaaatactttgaacaacgtccttttttattttgaagcccaatacttgagaaaatgttgtgagagaaagaaagagaatcattaaaaacacttgttttggggaacagatctaggtgttttagagaactgttgaatgcctcctcaaataatcgtcctgttttctatattggtctgcccttttttttttttttttttggaaggcatagctgaaagaagcagaccaagttgcaagaattccagtttgaactgcttcagaatctctaccttagccatagctgatagacattcaaaatttcctgagtacaccataaaggtgagaaatcaagattgtctccaagtattcagagtgagagctgctcattttactgatgaagttaagtggccaacaattcaagcaactcaggctgccatgaagcaacagctcccaacactgcactgacagacagcttttaggaaaaaagcattcattctaagaaaatggagtaaactctgaggcttgtctacccagatgattttttttaaacagctcctcaatgttactgcaaaccatctccaagacagataagagactgtgtcattttaattaatttttatttattttgatgcatcagttctcaccactagtgaggccagcaactgctgatgcttctttacaaagttttcagcaagaaaacaaaacaagaaaaaagcatcaccagaaccaacttatttcctttttcttatgtgatcctcattaactactaaaagatggtagctgcaatactttgtccagacagttaacagatttcattgatgcctccttagtacttaattgagacatggtagggtctgggtgtagatacaaccaatatctgataataagagcatgaactctgcacaaattccctgtgcatacatacagactggcaactgctttgctgcacatatccttgggatcccctttatgcagaagtactttctgaggggacaggaagggaggatattgttctctctgagctacaacataaagccaaattcttccttcaaagtacttcaattgcagatacagcaaatttcccccatgaagaaaattaacagtaatcaagttgaaacacatatgtaagtacagtctagtagacctacaaatgaataaactgtgtaacaataaagtatcaaattgccttaactacttaaagtaatagcaaaagttgcacaagagaggactaaacctgcacaacactatcagcagttagcacactcatatgggtttaactaagtagcagcacaagctagaatgctgtttttttttcttttttcttttaatagttcaatgactatatgggtatttatcataaaactcataaaattgctatttgacagcttctctgtagagtgaagttttgtgctcctagagatatcaccgatgttttgttctcccagctatcacagatgtgcagtgcaaatattcagacatcatgggaagcaggcattatctataattcaagaggtcagcctatgctttgccatggcacctgatactagtgtgtaaaagaacagatagcaatgtaacagtgaaataaaacaaatttagacagctttgcacagataaagattgcttcaacattaatgtctcctatttatttccatgaaaactaaaaagagcacgataacactctctgatagatcaaatccccagctacagaacacaattttcagcacagtcactgccatttgctgtgcattttttgccagagatgaacaagagcctgcatgctgcacttgtaaaaaactgcatggctgaccggaacatggctcctctttcacactgctgtcaccactgatgaaatgcaccacccacaacctcactgtgctcacatcccctgcctggtctccactcccaagcttcctgtgctaaactctcgtaagcctcagtaaatatgtcaggattattctactacttttctttcttcatcttactctattcagcatcacactactactatacattctggtgtttaaagcactaagacagatcaccatttcaccaaagattactgctaaaactgtaagctgcatcgggctggggcttggcatgacattcaagacctcataggataacaccagtcttaggctgcaaacaagatgtgcatgcctgcaaaacttcacctataactggaaaagaaaacaggttgtattaccttgtagtttcataccaacacagctaggaaaatgctgaatattaagcaagctgaaatagaaaactaccatagaacctttacggcaagaatcgtaagtagcagggaaattaactaacctctggcaaagttcatctgccaaatataaaaacccaaaaacatgtgacaccacctatcaattttccagctgccactaccaatttttctttagctgatcaatggaaagataagagtccctcttcaaagagctcaagacaattttgatcatgagaaaaaagaaacttcaatcaggaagtgactggaaaagatttgataaaacaagcttttcaggagctgtttgctaccaagctaaccgctggggaaagcctcttaggtctgtaaagacatctcttctgccacattaactgaagttaaaacataaaagaagccaaagaaccaagattccgttgctttcaacactgttttttttttccttgattataaatcaacaaagtaactgaggtatgatttttattgcttatttttcagttcccacttatcttcccataccactacaccgagcagcattcctgtgtgctaaagctggaatgctgctgtgtgtttcccatactattgcaaatactgcccactgatccaggagagtgaaccaggtcaaaggtgctagggtcacttcttgttttctttcctggagaagagtgtaagtgctctgaaaaattgctccattccctgcaaagctcactgcaacagatggtaaggacactgagtgcagagtaatatattacagagtttgtagaagtttttaatgcctcacttaaaaaatattactggtaagcaaaaatgtcttttttttctgaaactgggcagctaactgctaaataaccatggtagtaggcttactcgtagcactgagaacaaaagctagaagtttaattcacatattttgatagtaagactaattaaaacatagttggctatgaaatttgggaacttggctaattaaaacctctgaataaatcaacagaatgagaaatgttttaggagtaagagcattacagattatcagtgtaatactttaaaacagaagtgctatgtcatataaaatctgattaacatttttgaaatgattttgaccagttgaaatgtgttatgaagtatcatcaatgcaaaagcattttaacattaatgacaggaaattgctataatgttgtagctcacagtgtaacaactccatgaggattaatcatccctaaatggagattcagtaaaaaatgatcctgctatgctgacacagcatttccaggctacagttgcatgaggccagaataagctaactctcctgccagaacaaactctcctcctactatgacagctccacacctgcctttcttccccagaaaggtcacctccccatccaatccactgtacagctgtacaagtgcctacaccagcatgtgtgcacacagagaaatggactggggacagaagtgcttctttctgcagcagtacaacgtcatgcaaatacaggaaatgttactctccctacttccacaacccacagcagggacaatttagacagataggctgatacagttgtggaactacacactgaaaccacttcagcccatctcaacagccctggccaatgcattcaaaacaccctatcacatatccgagataaactgatgacagctctcagttgagatttgcattaattcacaggcacggtacagacagcattgctttacatgccagaagacactggtctgccaagtttgttggatcaaagatacctcttatgatccaggataatgatttaaaatggtcaagcaggtattctgcagacattaattttgatgacgagtggaaagctttgtcctaaaggtaatgtttatattagaagactgattctgttaactgtgattgataagcctcccaacatcattaaaaaagagatagcactgccatgcactaagatgtcaaaagtgcatttaaacttatgccatataaacttggcagaacagtacaatgcttgaagattaatatttataaaaaggaatagctttattttggaagtctgtagctaattcactactaattaatattctctaagaaatggtttaatgcaagactgcttaaaacaaaggaaaaagcaacaggtatatctgcactgaattattagttgagattaattttaaaagtgctgtgagaaatacttttcctaacataacttgcaatacatcagtgtaaatgcagaaatctattacttgtcttttatacctctttttgcagtccacgaggacatcatacagcagtcttagaagagtgtgctttttgtctgtgctgagattccagtcagaaatccattttcggacctaagtagaatataagtgaaaaggaagcactggaaaaaggctaaaataaaactgtagttattgactctcaagcagaaaaggattcaaaagaatctttcacagagatttatcctctgcatcctctgactatcaggctccccatgtagaatgtagaagctttaccacaagaagcaggaagtctgcattctctatgttactccttaaggacaagaaattccaacacactgcaattccagagcaaggaacacgatgcccccaattcctgatcaaagctcctcactttcattactatcacaagaaacagactcacggaattatgcacagaactagaaacaaaaactaaatttgatctagagcagcttgatctagattccatacgtatacctttaaaaggtaaaaagttttatgttctacatttctatttcatagactctagcaaattttagcaagaagagattgtctgtatcaactgcgactaatacttagtgaaatgcagtgcggttaatacagaggccacaacttgaagcaccagagtgattacctgatctaattcagttggaatgtactggatggcaccacatgatgaggccactttaagaaggctgcagtacactgtgtatctcacaggagtgttcttatccatgccatggaagagattgctcagtctaaaccacaaacaacaaaaaactgagttaaaaaggtttaggaaaatatttaggaaaggtttaggaagaaggaatgcatataaatgtttctagtcatgtgcgtgctagtacaaagcacgtggtagcaccataagtccatgctgaattgtaactgttcagttttataacaggttccagcagagaagccaaaagctctgtacatttttaagttcataatacttagcaaagaaagtataacggtaatttactttatgataagcagtattcgggttttgttttttttttttacacttttccctacagcagacaaatcttaatccaacatcctacgctttaatttacagagatgtacgaaataatgtgctctctctgcaagataccactgtctcacttttctctgtgaaatacttacagctgcagtctgagagacgggcgctctccttcccgaaatttcactaacttctcacacagactttcaatcaatgcttcctgtttgtcaggttccaggataagaa
//
by
@meso_cacase at
DBCLS
This page is licensed under a
Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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