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Previous release (v1)
2026-10-10 06:12:47, GGRNA : RefSeq release 233 (Jan, 2026)
Summary:
Results:
Matches are highlighted with green background.
Overlapping matches are dark colored.
id="NP_001038898.2" /db_xref="GeneID:751723" /db_xref="ZFIN:ZDB-GENE-060825-73" /translation="MDDENWETDAVMVATAPAPAELPEVKLFGRWSCEDVQVSDMSLQDYIAVKENYAKFIPHSAGRYAAKRFRKAQCPIVERVTNSLMMHGRNNGKKLMAVRIMKHAMEIIHLLTGENPLQVLVNAIINSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECLADELINAAKGSSNSYAIKKKDELERVAKSNR" misc_feature 119..679 /gene="zgc:153322" /note="Eukaryota homolog of Ribosomal Protein S7; Region: uS7_Eukaryote; cd14867" /db_xref="CDD:271246" misc_feature order(119..121,206..214,218..229,326..328,338..340) /gene="zgc:153322" /note="S9 interface [polypeptide binding]; other site" /db_xref...
AA_position 201
NM_001045433.1 -
Danio rerio (zebrafish) -
NCBI -
UCSC
protein_id="NP_956386.1" /db_xref="GeneID:368488" /db_xref="ZFIN:ZDB-GENE-030616-63" /translation="MSLQWTAVATFLYAEVLAVLLLCVPFISPKRWSKFFKSRLVTAITSYGNTAFIVIICILVFLLIDAFREVRKYSVAEKVDLSNNPVAIEHIHMKLFRAQRNEYIAGFALLLCLLLRRLATLLSQQATLMASHEAFQKQAEGANDAAKKYMEENEKLQEKLRQAGIEVPEVGGKAKGGMEEDKKNLKEEVRQLKDELDATKKALQKSDSDVKAMKKQAENLTTEYDRLLEEHARLQAKCDAQQDKKSD" misc_feature 106..>426 /gene="bcap31" /gene_synonym="si:bz30i22.4; si:rp71-30i22.4; zgc:56389" /note="Bap31/Bap29 transmembrane region; Region: Bap31; pfam05529" /db_xref="CDD:461673" misc_feature 837 /gene="bcap31" /gene_synonym="si:bz30i22.4; si:...
AA_position 193
Synonym: si:bz30i22.4; si:rp71-30i22.4; zgc:56389
NM_200092.1 -
Danio rerio (zebrafish) -
NCBI -
UCSC
gene="itm2cb" /gene_synonym="fj35c02; itm2c; wu:fj35c02; zgc:66349" /note="integral membrane protein 2C" /codon_start=1 /product="integral membrane protein 2Cb" /protein_id="NP_956274.1" /db_xref="GeneID:335863" /db_xref="ZFIN:ZDB-GENE-030131-7806" /translation="MVKISFQQVTVQKPEKENDGDKEEIQMPYSHKDELVLPVRSKKSPFSGLWCVVLGLVIFLSGLIMASVCLYRYYFNPQIPEDSFFHCRMMYEDPVFAPLLGRQELEEKVGIYLDDNYEQISVPVPDFGSGDPADIIHDFHRGLTAYYDIALDKCYVIELNTTIVMPPRNLWELLVNVKRGTYLPQTYMIQEEMVVTGRVRNLRQLGPFIHRLCYAKETYRLRRRSGQRRIDKRETKNCHTIRHFENTFAVETKICERLLL" misc_feature 456..734 /gene="itm2cb" /gene_synonym="fj35c02; itm2c; wu:...
AA_position 32
Synonym: fj35c02; itm2c; wu:fj35c02; zgc:66349
NM_199980.1 -
Danio rerio (zebrafish) -
NCBI -
UCSC
Splign:2.1.0" CDS 173..955 /gene="lratd1" /gene_synonym="fam84a; zgc:63724" /note="family with sequence similarity 84, member A" /codon_start=1 /product="protein LRATD1" /protein_id="NP_956912.1" /db_xref="GeneID:393590" /db_xref="ZFIN:ZDB-GENE-040426-1247" /translation="MGNQLDRITHLNYSELPTGDPSGIEKDELRVGVAYFFSDEEEELDDRSQSDSFKDNNSPSKDGPVARNEIEYTAFCCQECIYSKLRENEDLNVYSVKTLLTMCKPGDLLELVANAQPPHWAIFEGEDQVIHLYKGEIRKDSLFEISCGRQARIVNNRYRYRPLPADLVMQNASGHVGLSSGEICWTNSESFAAWCRFGKREFKAGGEVHSVEQRYFLKVHLSESTAHTLMFRSLEEMIRERRRVDASGILKELSLVTGKE" misc_feature 527..769 /gene="lratd1" /gene_synonym="fam84a; zgc...
AA_position 26
Synonym: fam84a; zgc:63724
NM_200618.1 -
Danio rerio (zebrafish) -
NCBI -
UCSC
gene="fhl5" /gene_synonym="zgc:92375" /codon_start=1 /product="four and a half LIM domains protein 5" /protein_id="NP_001004112.1" /db_xref="GeneID:445475" /db_xref="ZFIN:ZDB-GENE-040822-3" /translation="MSTERFDCHYCKDTLLGKKYILKEDTQYCTKCYENLFANCCEVCSLPIGCNCKDLSYKDRHWHENCFKCAKCSRSLVDKPFAAKDELMLCTECYSHEYSSKCSTCKKTVMPGSRKMEYKGNSWHETCFLCQRCQQPIGTKSFIPKDNNYFCVPCFEKQFAYQCCACKKAITTGGVTYHDKPWHRECFTCIGCKRQLAGQRFTSRENYPYCLDCFSNLYAKKCVGCTKAITSLAGAKYISFEERQWHSECFTCMQCSVSLVGRGFLTQRDDILCTDCGREK" misc_feature 146..322 /gene="fhl5" /gene_synonym="zgc:92375" /note="The first LIM domain of Four and a half LIM...
AA_position 84
Synonym: zgc:92375
NM_001004112.1 -
Danio rerio (zebrafish) -
NCBI -
UCSC
inference="alignment:Splign:2.1.0" CDS 43..888 /gene="snrpa" /gene_synonym="fc19d01; wu:fc19d01; zgc:77810" /codon_start=1 /product="U1 small nuclear ribonucleoprotein A" /protein_id="NP_955965.1" /db_xref="GeneID:324121" /db_xref="ZFIN:ZDB-GENE-030131-2841" /translation="MAGQEMRLNHTIYINNLNEKIKKDELKKSLYAIFSQFGQILDILVSRTLKMKGQAFVIFKEINSASNALRSMQGFPFYDKPMRIQYSKQDSDIIAKMKGTFVERDRKKEKKKPKVPEAGAGKKGGSGATPAMAGVPAAIPGMPPMSQAPRMMPMPGQPPYMPPPGMMPPPNMAPGQMPPGAMPPGGMMPGQMPGQMPQQVSENPPNHILFLTNLPEETNELMLSMLFNQFPGFKEVRLVPGRHDIAFVEFDNEVQAGAAREALQGFKITQSNAMKISFAKK" misc_feature 61..327 /gene="snrpa" /gene_...
AA_position 23
Synonym: fc19d01; wu:fc19d01; zgc:77810
NM_199671.1 -
Danio rerio (zebrafish) -
NCBI -
UCSC
stop codon" CDS 51..935 /gene="pnp5b" /gene_synonym="zgc:101740" /EC_number="2.4.2.1" /codon_start=1 /product="purine nucleoside phosphorylase 5b" /protein_id="NP_001004628.1" /db_xref="GeneID:447889" /db_xref="ZFIN:ZDB-GENE-040912-54" /translation="MTPDSATGYSYEECTATADWLLKRAPERPLVGIVCGSGLGGLAKMLKDELVINYCDIPNFPQSTVHGHAGKLVFGTLKGKPCVCMQGRFHLYEGYAIQKTTMPIRVFKLMGVETVILTNAAGGLNQDFKVGDIMIIKDHINIPGFAGHNPLVGANDDRFGVRFPCMSDAYDRDLQQLVRAVADELDFSVFMRDGVYSVLGGPSFETIAECRALRQLGADAVGMSTVHEVIVARHCDMRVLALSLITNKAVMDYQSEKKANHEEVLETGALRAKQMEKLVSTVVSRIPNTPTHCS" misc_feature 84..899 /gene="pnp5b" /gene_synonym="zgc...
AA_position 47
Synonym: zgc:101740
NM_001004628.1 -
Danio rerio (zebrafish) -
NCBI -
UCSC
db_xref="GeneID:336553" /db_xref="ZFIN:ZDB-GENE-030131-8497" /translation="MSYAMSTTVAVTVGVVLVSTAGLLGYYYFNRKRKILITLIDPSEKYKLRLVDKEIISHDTRRFRFALPSPEHVLGLPVGKHVYLSARIDGNLIVRPYTPVSSDDDKGFVDLVVKIYFRDVHPKFPEGGKMSQYLESLRIGDVIDFRGPGGLLEYKGAGRLDIQADKKAPAETKTVKSLGLIAGGTGITPMLQLIRDITKNPNDTTTCSLLFANQTEKDILLKDELEEIQARHSDRFKLWFTVDRAPADWEYSQGFISAEMIQDHLPPPSDDSMILMCGPPPMIQFACNPNLDKLGYRQSQRFAY" misc_feature <174..971 /gene="cyb5r1" /gene_synonym="dia1; wu:fb13e02; wu:fb15h03; zgc:56042" /note="nitrate reductase [NADPH]; Region: PLN02252" /db_xref="CDD:215141" exon 75..221 /gene="cyb5r1" /gene_synonym="dia1; wu...
AA_position 222
Synonym: dia1; wu:fb13e02; wu:fb15h03; zgc:56042
NM_200189.2 -
Danio rerio (zebrafish) -
NCBI -
UCSC
EC_number="2.3.2.27" /codon_start=1 /product="E3 ubiquitin-protein ligase RNF183" /protein_id="NP_001070136.1" /db_xref="GeneID:767730" /db_xref="ZFIN:ZDB-GENE-060929-1090" /translation="MGDGREKPQSSRKGSNAKPKLDSKGSLNLGSSEQRQRADKPVRRSRSNDTENRRREASRGRERDRRDEGRPQRGRSEEGRRRGHNHEPGNRAWDKEPPKDELQDTECIVCFCNFDNVFKTPKLLSCGHTFCLECLARINVNSPEIKTLTCPICREVTEIRHGRDLPHLLNNEAIFRQLPSEMQRALSVRFKRSKGKLVLKNPPTNNSIKTTLNLPVSKKKEEQAGNNAIGAIEEGLGQATMINVGRPPNRMRGRMRRVMYSSQCYYAVVAVIISITVALMMVGIFTFVVMPNLQRPITKPLQNQTGSSAVQADSSP" misc_feature 490..654 /gene="rnf183" /gene_synonym="zgc:153310" /note="RING finger...
AA_position 99
Synonym: zgc:153310
NM_001076668.1 -
Danio rerio (zebrafish) -
NCBI -
UCSC
MSKRKVTFQDGDSEITLEEEIPKKKMVDGLTGPGSRFKEKHSLDSDEEDEVEDVDNSSKYDILASDDVEGQEGATIDYDEGVRITPFNLDEEMQEGHFDSEGNYFVNKEKDIRDNWLDNIDWVKVKEQPVKKKKGLAAKRKRRVGDEDEAEEEIKREEQRNDSEDEEEEKEKEPAEDPLAAYSHYQLTEAIIELLLPGETVSAALRRLGGLGGQKKKGRQRNGEEEKKEASNRDADKLDKLTALADRLVGIGEFEIYQQTYEKLAYQLKGMTRGKAAKTLGDEEEDKDELDMFGDDFDEKHDADKNEDNDNRKVSDEVMWEYKWENKESSELYGPFSSQQVQDWVDEGYFNDGVYCRRIGQEGASFYNSKRIDFDLYT" misc_feature 1007..1189 /gene="cd2bp2" /gene_synonym="zgc:56165" /note="GYF domain: contains conserved Gly-Tyr-Phe residues; Proline-binding domain in CD2-binding and other proteins. Involved in signaling lymphocyte...
AA_position 287
Synonym: zgc:56165
NM_200961.1 -
Danio rerio (zebrafish) -
NCBI -
UCSC
db_xref="GeneID:335449" /db_xref="ZFIN:ZDB-GENE-030131-7389" /translation="MPGHLQEGFGCVVTNRFDQLFDDEEDPFEVLKQAEKKKKDATVPGAAKTAAQAAKQPKKESQKERRNPLPDKKEETQAPVPLKKDGMRKMGRRPEQQGQQGSVPQQQAGQGEGRPPADRRPDRRPPRERRFDKPADEKPAEGGEFSVEKTMGDRPFRGRGGPRGGRGGRGRGVGRTDGFDSRGKREFDRHSGSDRSLKAEEKRGGSGSHNWGTVKDELSELDQSNVTEDTPEGEEHPPADSENKENEVEEAKEEGPKEMSLDEWKAQQDKERAKVEFNIRKANEGADWKKGYVLHKSKAEDASADDAAGDHHFRKPANDITSQLEINFGDLGRPGRGRGGPRGGRGGRGAAAATRPPRERRPDKVGGVSVPNVDDPEAFPALA" misc_feature 86..>358 /gene="serbp1a" /gene_synonym="hm:zeh0245; PAI-RBP1; serbp1; wu:fa12d05; wu:fb36e07; wu:fc16f12; wu:fj13e12; zgc...
AA_position 223
Synonym: hm:zeh0245; PAI-RBP1; serbp1; wu:fa12d05; wu:fb36e07; wu:fc16f12; wu:fj13e12; zgc:55489
NM_214714.1 -
Danio rerio (zebrafish) -
NCBI -
UCSC
id="NP_001002638.1" /db_xref="GeneID:436911" /db_xref="ZFIN:ZDB-GENE-040718-385" /translation="MGKRRAPELYRAPFPLYTVKMDPRTGLIITAGGGGASKTGIKNAVHFLSLDLVGGAHSATLLHTHETDTRATMNMCLGGDVMAAGQDDTCRLMKFSLHEAKHNKKPAAKDGTGDKGGARKRAGKGQNADGGEGDAAQMKQDSTQISVQDLGSVQADFSPQDPCVKCVRFSLDLTLLLSGGADGFVRVWEFPSLKEKLNFRAHKDELEDIDISPDKKHIVTVGRDFECSVWSGDQLAVGLCWHENMPQITEKTYRYKACRFAKVEDQKDALRLYTVQIPHKRDRKPPPCYITKWDGRAFLPLLTKPCGNEVISCLTASDSGTFLGLGTVTGSVAIYIAFSLQKLYYIQESHGIVVTDLTFLPDAPKTKAVKGDNEVVMLSVAVDSRCQVHAVSNRRSFPLWLVLFFCGLMVVAVILLLQSFFPGFI" misc_feature 868 /gene="preb" /gene_synonym="sb:cb385; wu:fj59h11; zgc...
AA_position 203
Synonym: sb:cb385; wu:fj59h11; zgc:92203
NM_001002638.1 -
Danio rerio (zebrafish) -
NCBI -
UCSC
ALFLSVNGKPLSERRTYNKLLLISFDGFRWDYDQDVDTPNLDKLVKEGVKAKYINPPALTMTSPSHFTTITGRWIEDHGVVHNLMFNDTTGLRVPHKATLKKSEWWDNGVLPLWITAQKQGLKTASFYYPGGGVNYSGQAVNRFLVENHGSPDDNETEWQQNIDTVMGWFAKEDFDFVTLYYGEPDNVGHAVGPETHERRKIIEQIDRTIGYLRESIHKNALTDHLNVILTSDHGMTTIKNATEVKEIVLANYISLLKLTRFDLLDYGGFGMITPREGKEQEVYNALKNAHPNLTVYRKDELPENFHMKKHARIQPIVLLADLGFNINSRLILDINKGDHGFSSEEMDMKMFFRAFGPDFSPNFLAEPFDSVSIYPLMCKLLGVVPEANNGSLSDTKGMLVDNFDAGGSSGRIQVSFTLLVVSTVILTLI" sig_peptide 2..52 /gene="zgc:153896" /gene_synonym="si:ch211-225l4.2" /inference="COORDINATES: ab initio prediction:SignalP:4.0" misc_feature 80..1177 /gene="zgc...
AA_position 308
Synonym: si:ch211-225l4.2
NM_001045194.2 -
Danio rerio (zebrafish) -
NCBI -
UCSC
LGGKTGGSDYSRQSGGGAGNKKDVVELTDDNFDRTVLESDDVWLVEFFAPWCGHCKNLEPEWTAAATEVKEQTKGKVRLAAEDATVHQGLASRFGIRGFPTIKVFRKGEEPEDYQGGRTRSDIVARALELYSDNIPAPELQEVLNEGILKKTCEDYQLCIIAVLPHILDTGASGRNSYLEVMKTMAEKHKKKMWGWLWTEAGAQMELEASLGIGGFGYPAMAAINSRKMKFALLKGSFSETGIHEFLRELSVGRGSTATVGGGALPKINTVQAWDGKDGELPMEDDIDLSDVDLDDLEKDEL" sig_peptide 27..83 /gene="pdia6" /gene_synonym="pdi-p5; pdip5; wu:fb51h08; wu:fc09e09" /inference="COORDINATES: ab initio prediction:SignalP:4.0" misc_feature 102..410 /gene="pdia6" /gene_synonym="pdi-p5; pdip5; wu:fb51h08; wu:fc09e09" /note="PDIa family, P5 subfamily; composed of eukaryotic...
AA_position 437
Synonym: pdi-p5; pdip5; wu:fb51h08; wu:fc09e09
NM_197933.2 -
Danio rerio (zebrafish) -
NCBI -
UCSC
note="upstream in-frame stop codon" CDS 277..1704 /gene="trim62.1" /gene_synonym="trim62; zgc:158653" /EC_number="2.3.2.27" /codon_start=1 /product="E3 ubiquitin-protein ligase TRIM62" /protein_id="NP_001074143.1" /db_xref="GeneID:791192" /db_xref="ZFIN:ZDB-GENE-070112-502" /translation="MASYLKDELLCSICLSIYQDPVSFGCEHYFCRKCITEHWSRQEHHGTRDCPECRRTFTDPLLSPSLKLSNIVERYTAFPLDAILNAQRNSYPCKDHEKVKLFCLSDKSLVCFFCDEPALHEQHQVTTVDVAYEEIQREMKEQLATLQDSEKGHTEALQLLQRQLTETKSSAKSLRATIGEAFERLQRFLRERQKSMLEELEADTARTLTDIEHKIQRYSQQLRDVKEGIQILQERLSETSRHEFLEGIALTSDRIKGKIHETNLTYEDFPTSKYMGPLQYTIWKSLFLDISPVPAALTMDPSTAHQRLILS...
AA_position 6
Synonym: trim62; zgc:158653
NM_001080674.1 -
Danio rerio (zebrafish) -
NCBI -
UCSC
product="tripartite motif containing 35-28" /protein_id="NP_001103174.1" /db_xref="GeneID:559351" /db_xref="ZFIN:ZDB-GENE-071004-19" /translation="MADSSDDDITDRPPLLETDLTCPVCKDIFKEPELLSCSHSFCKVCLEGSWKNQTKRQCPMCRKCCDGETPIPNRALHNACVSYKKERNRRGATTGSEEELCGLHQRPFQLFCIKDEEPVCVECVTLHPGHELVPTEQGVPFCKDELTMKIKILESKLDSFKRMKKRYKETITFIEGQTKEAENQIKQEFERLHQVLNEEEKTRLLALSREEDEKKQVVTEKIEAIGRDITGLAELIQSVKREMGAEDLTFLLNFQKLKRRTQWTGDDPRRVYGALINMALHVGALGYKIWESMQAHVTCLPVILDPNTASPWLSISPDFSSMQESRERQSFPDNPERFDPCVFVLGSEGFSSGRHRWEVRVADHPKWILGVCKESVVRKRKFTVTTTAGVWTIGLSKGVYNALTSPRTVLNLERRPETVRVKVNMEKGEVSFWDTGNNKHLCTFNDKFTGKLF...
AA_position 143
Synonym: zgc:171672
NM_001109704.1 -
Danio rerio (zebrafish) -
NCBI -
UCSC
gene="zgc:158423" /note="upstream in-frame stop codon" CDS 59..1501 /gene="zgc:158423" /codon_start=1 /product="uncharacterized protein LOC790938" /protein_id="NP_001073552.1" /db_xref="GeneID:790938" /db_xref="ZFIN:ZDB-GENE-061215-58" /translation="MKDIELKEVDQTKQLMTRENGCVKVTVPENTAVKYTGLSKDELVKVAGTPGWIRIRWALLALFFLGWVGMLAGAIVIIVQAPRCKPIPEMHWWNEGPLYQISDVNAFTESGLKGLEGKLDYLSQMNVAGVVLGPIHSLKIDQLDTLNLISVQSEVGTENELESLLGLAHKKGIFIVLNLTPNFNKTSAWFNNFNAVAEKIKDACTYWLDKGLDGIFLSDLNEIPTDAWPSIKEIFNRSDATKEVALMGSVNSMSVNDISVLLNRSGVDLLLTGQPDLSDSGEKQAQIIKEFNSSIQQTSLGWRSRQDPGTLAAEFPIRLYQILLFTLPGTPVFSAGEELGLKAEEQLQAL...
AA_position 40
NM_001080083.1 -
Danio rerio (zebrafish) -
NCBI -
UCSC
wu:fj94f01; zgc:110227" /note="spliceosome associated protein 61" /codon_start=1 /product="splicing factor 3A subunit 3" /protein_id="NP_001004289.1" /db_xref="GeneID:446168" /db_xref="ZFIN:ZDB-GENE-040908-1" /translation="METILEQQRRYHEEKERLMDAKTKEMLTKKTTLRDQINSDHRVRAMLDRYMEVSANLRDLYEDKDGMRKDELNAISGPNEFAEFYNRLKLIKEFHRKHPNEICVPMSVEFEELMKAKDNPSEEAQNLVEFTDEEGYGRYLDLHDCYLKYINLKGVEKLEYVTYLSTFDQLFDISKDRKNAEYKKYLEMLLEYLQEYTDRVKPLLDQNELYGKILAEFEKKWETGMFPGWPKETSSALTHAGAHLDLSAFSSWEELASLGLDRLKSALMALGLKCGGTLEERAQRLFSTKGKSLESLDPSLFAKNPKAKGPKKDSERNKESAFLEAQIYEYVEILGEQRQLSHENVQRKQARTGEERDEEDEEQPSESESEDEDNEII...
AA_position 69
Synonym: SAP61; SF3a60; wu:fi15a06; wu:fj94f01; zgc:110227
NM_001004289.1 -
Danio rerio (zebrafish) -
NCBI -
UCSC
note="oxidative stress responsive 1a" /codon_start=1 /product="serine/threonine-protein kinase OSR1a" /protein_id="NP_001092217.1" /db_xref="GeneID:568602" /db_xref="ZFIN:ZDB-GENE-070620-25" /translation="MSEDPSSQPWSIDKDDYELQEVIGSGATAVVQAAYCKPRKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDFIKYIISKGEHKSGVMDEPSIATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDMTRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADLWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPCLETGVTDKEMVKKYGKSFRKMISLCLQKDPEKRPTAAELLKHKFFTKAKNTDYLKEKLLERAPTIGERSRKVRRVPGSSGRLHKTEDGEWEWSDDELDVESEEGKAAVAALRSPRVKEEAVPNAEVFPAESSGFLQPAAVGQPEVPHAA...
AA_position 85
Synonym: wu:fb77f12; zgc:165661
NM_001098747.1 -
Danio rerio (zebrafish) -
NCBI -
UCSC
map="21" gene 1..2565 /gene="poglut3" /gene_synonym="im:7159505; kdelc2; zgc:165521" /note="protein O-glucosyltransferase 3" /db_xref="GeneID:566063" /db_xref="ZFIN:ZDB-GENE-060810-142" exon 1..449 /gene="poglut3" /gene_synonym="im:7159505; kdelc2; zgc:165521" /inference="alignment:Splign:2.1.0" misc_feature 170..172 /gene="poglut3" /gene_synonym="im:7159505; kdelc2; zgc:165521" /note="upstream in-frame stop codon" CDS 221..1777 /gene="poglut3" /gene_synonym="im:7159505; kdelc2; zgc:165521" /EC_number="2.4.2.26" /note="KDEL (Lys-Asp-Glu-Leu) containing 2" /codon_start=1 /product="protein O-...
AA_position 515
Synonym: im:7159505;
kdelc2; zgc:165521
NM_001098745.1 -
Danio rerio (zebrafish) -
NCBI -
UCSC
LATMCGGKILDKLRYVFSQISDSNGVMVFAKFDQFLREVLKLPTAVFEGPSFGYTEHSVRTCFPQQKKILLNTFLDVLMADPPPQCLVWLPLMHRLANVENVFHPVECSYCRSESMMGFRYRCQQCHGYQLCQSCFWRGHASGPHSNQHQMKEHSSWKSPAKKLSHAISKSLGCMPIGEPPHPVFPEAAERPQDLAHTTTLESPSRLDEEHRLIARYAARLAAEASNSTQCPPSDLSFNFDANKQQRQLIAELENKNREILQEIQRLRLEHEQASQPTPEKAQQNPTLLAELRLLRHRKDELERRMSALQESRRELMVQLEGLMRLLKAQTGTSPHSSPSHSASCTMPMPIRSTSAGSTPTHTPQDCLAGVGDDVLDAFSQGVPRNLRNDLLVAADSITNTMSSLVKELHSVDDGLEEEEENMRNGREKTESE" misc_feature 160..642 /gene="dtnbb" /gene_synonym="bdtn; btnb; dtnb" /note="EF-hand-like motif found in dystrobrevins and similar proteins; Region: EFh_DTN;...
AA_position 434
Synonym: bdtn; btnb; dtnb
NM_001080573.1 -
Danio rerio (zebrafish) -
NCBI -
UCSC
LLSENYSAVAQTVNLLAEWLIQMGVEPAQVQERVENHLKSLLIKHFDPQKADSIFTVEGETPAWLEQMIAHTTWRDLFYKLAEAHPDCLMLNFTVKLISDAGYQGEITSVSTACQQLEVFSRVLRTSLATLLDGGEQNLEKNLPEFAKMVCHGEHTYLFAQAMMSILAQEEQGGSAMRRIGQEVQKYAHERGHDASQITLALGTAAAYPRACQALGAMLSKGALNPADITVLFKMFSSMDPPPVELIRVPAFLDLFMQSLFKPGAKINQDHKHKYIHILAYAASVVETWKKNKRVNINKDELKSTSKAIETVHNLCCNENKGATELVAGLSTLYQCIRFPVVAMGVLKWVDWTVSEPRYFQLQTDHTPVHLALLDEISTCHQLLHPQVLQLLIKLFETEHSQLDVMEQMELKKTLLDRMVHLLSRGYVLPVVGYIRKCLEKLNTDISLIRYFVTEVLDVIAPPYTSDFVQLFLPILENDSIAGTIRTEGENDPVAEFIAHCKSNFIMMN" misc_feature 62..1786 /gene="nelfcd" /gene_synonym="th1l; zgc:55482" /note="TH1 protein;...
AA_position 369
Synonym: th1l; zgc:55482
NM_201190.1 -
Danio rerio (zebrafish) -
NCBI -
UCSC
SEDRNALLEDTRVIGDQRQSLDELAKKAEVKLVFGPSDQSDNEAGADPLVLKDVRELCNERVHFLQCLLEGELKANPSTQFTRDQRHAVIQHWTSAVENVLRSHPPNQVLSALQALTSRHQVALEEKITALNLERDVSALGFRYESDHLIDVSSELEELTPVRSLLQSAWEEVEQSYFELAQTRSRRRQMETELTALIRKAEATHKTDSVSRCVFELEMEAVKQVSVRDSIRDQCVQLQQQARQGQDAIRALQTHWQTVMDFRQLVNRRQEQIRSLIKGNSSVKAELTRVHEEVGQFFKDELSPQFVTVIGASSGQRNSVSQGAKHFSCVSLAALDRRVMKGGQRAPAAQLSIHRIQSLAFHKLCESLSFPMYMAPEELWSQAVTRRLEFRNLRRLLQLFSDSAADLQKRAAQLPSPDQQTLLQRVKMEDEEILQTLLPRARELMHRCSKGLLYSEQVKTAITHWWDQPAQFALPEMEREGLTFQQWLQRWRLATKES" misc_feature 39..1922 /gene="haus5" /gene_synonym="zgc:101661" /note="HAUS augmin-like complex...
AA_position 442
Synonym: zgc:101661
NM_001007438.1 -
Danio rerio (zebrafish) -
NCBI -
UCSC
SQPEKVFIVQIIRDTGTMNIEPKDHSAFIKFNRTFTWNLKPLVSKSLQLNFSSTGLRQIEPEDSCPDNHRYILAVENISIGTFCQNGVIRQIDVRNAGKLSAEVTGGQSLSTKVIAVSVGRLMNSLVNIHAVLPEKSSIQDFITPNTTPENAETMWFFSMPNAYYADVRILKYTLPTCLSSESIPTMKYTWQGRDALVKRMNENQPSVEPGNFNISIKNCKMSTVSSLNRLMVHFQISAIKRRKGQCEGDLPDKQVLKIQVMKKDPKSVCVLKLDSVIMDTVTIASGNHFILNTFDCNKDELELTVIQTEECKEWRNCTSTLFPLHFNYEQQCIPGVLKMITWYIQGPVNSAVELQSPTDGLRYCLPEDNCNSILLLNVSQVMNPGTTVGQFCPKGSVQKIQIRESKIAVTASVTSFSDRSVAAKPILSYSFTQGISENYIFSVTPKMDNPTTLATPGWPSAMKASSTVSWIVNMEPQYTSVLTFRNVSQPKCKQVHTNIAVQTIRSQTVLYTTTKDDKMKDLLLPEGFYLNMTNCKSPTGAFRAMMEVTVQSNTNKLLGIILGVVGVVLAIAVAVVIWFVLRKKKRNKAPPVSVYNPSE...
AA_position 379
Synonym: zgc:113071
NM_001014333.1 -
Danio rerio (zebrafish) -
NCBI -
UCSC
IKLGVIEDHSNRTRLAKLLRFQTSHSDTVLSSLEQYVERMKEKQDKIYFMAGTSRKEAESSPFVEKLLKKGYEVVYLTEPVDEYCIQALPEFDGKRFQNVAKEGVKFDESDKAKEKREALEKEFEPLTTWMKDKALKEQIEKAVLSQRLTNSPCALVASQYGWSGNMERIMKAQAYQTGKDISTNYYASQKKTLEINPKHPLIKEMLRRVNEDAEDKTAADLAVVLFETATLRSGYQLQDTKAYGERIERMLRLSMNVDLDAQVEEEPEEEPEEQTEEAEDEEEVQADEAEEESEATSKDEL" sig_peptide 84..146 /gene="hsp90b1" /gene_synonym="fb61d09; GP96; GRP94; tra-1; tra1; wu:fb61d09; wu:fq25g01" /inference="COORDINATES: ab initio prediction:SignalP:6.0" misc_feature 330..908 /gene="hsp90b1" /gene_synonym="fb61d09; GP96; GRP94; tra-1; tra1; wu:fb61d09; wu:fq25g01" /note="...
AA_position 790
Synonym: fb61d09; GP96; GRP94; tra-1; tra1; wu:fb61d09; wu:fq25g01
NM_198210.2 -
Danio rerio (zebrafish) -
NCBI -
UCSC
PMS1 protein homolog 1" /protein_id="NP_958476.2" /db_xref="GeneID:368631" /db_xref="ZFIN:ZDB-GENE-030616-528" /translation="MKALPPETVRLLCSSQVITSVLNVVKELIENSLDAGSSSLEVKLENYGLDRIEVRDNGSGIKATDVSVMAVKHYTSKISCHEDLEQLETYGFRGEALASICAISEVIITTKTADDDFSIQYSVDHNGQIVSQKPSHLGQGTTVCAANLFKNLPVRRQYYSNTKKCKDELKRVQNLLMAYAVIKPELRVTLSHNKAVVWQKSRVSDHRTALMAVLGAASVANMLPVQHHQEQPEITIDGFFPKPGSDLNSTSSSTTDKSFIFVNSRPVHHKEILKLIKQYYTSAQSNSESVSRRYPTFMMNITIPASTVDVNLTPDKTEVMLQNKDEVLLSVETMLISLYGYSNGEENLKTAGNPPDVTSLDEPKRTSPDISLKHPELPEDSSSNAEKQDGELSLSNTANTSSSSISEDWVINRSDLDSINCSVPVDDVVMNSTADLNSNSPKASESDSGPESQISAENWSAGRVFSNQITGEYLE...
AA_position 166
Synonym: PMSL1; si:dz164h20.2; si:dz72b14.2
NM_201319.2 -
Danio rerio (zebrafish) -
NCBI -
UCSC
Data Export:
Maximum 10000 results can be retrieved as Tab-delimited text or JSON format.
Debug Info:
Redirect URI : https://172.18.8.233:20082/en/dr/aa%3aKDEL
lang : en |
div : |
spe : dr |
query_string : aa:KDEL |
format : html |
download :
0.000 | 0.000 | search_start;
0.084 | 0.083 | count_done; http://172.18.8.71:7700/v1/refseq/query?q=(aa:KDEL)?source=Danio rerio (zebrafish)?to=0&format=json
0.128 | 0.044 | search_done; http://172.18.8.71:7700/v1/refseq/query?q=(aa:KDEL)?source=Danio rerio (zebrafish)?to=49?from=0?snippet=full_search?drilldown=source?get=accession,version,gi,length,symbol,synonym,geneid,division,source,definition&format=json
0.131 | 0.003 | cgi_end;
GGRNA ver.2 by
@meso_cacase at
DBCLS
This page is licensed under a
Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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