LOCUS       XM_068218582            1383 bp    mRNA    linear   VRT 08-SEP-2024
DEFINITION  PREDICTED: Danio rerio zmp:0000000924 (zmp:0000000924), transcript
            variant X2, mRNA.
ACCESSION   XM_068218582
VERSION     XM_068218582.1
DBLINK      BioProject: PRJNA13922
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Danio rerio (zebrafish)
  ORGANISM  Danio rerio
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Ostariophysi;
            Cypriniformes; Danionidae; Danioninae; Danio.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_018394784.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_000002035.6-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/15/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 40% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1383
                     /organism="Danio rerio"
                     /mol_type="mRNA"
                     /strain="Tuebingen"
                     /db_xref="taxon:7955"
                     /chromosome="10"
                     /map="unlocalized"
     gene            1..1383
                     /gene="zmp:0000000924"
                     /note="zmp:0000000924; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 7 Proteins, and 53%
                     coverage of the annotated genomic feature by RNAseq
                     alignments"
                     /db_xref="GeneID:101884643"
                     /db_xref="ZFIN:ZDB-GENE-130530-927"
     CDS             19..1383
                     /gene="zmp:0000000924"
                     /codon_start=1
                     /product="macrophage mannose receptor 1-like isoform X2"
                     /protein_id="XP_068074683.1"
                     /db_xref="GeneID:101884643"
                     /db_xref="ZFIN:ZDB-GENE-130530-927"
                     /translation="

MRAEMSEDIYNNVIKTESERMNRERVEMAVVIYESTDCVRDYDFRTESNTQQPIQNTGSDSVKTRFSRAAPVCLVLLCFLLLTAVIVLSVFIYTNNTNYTEERRQLITNITNLTGAKDELTNLLYDKDQLIKWLQIFGQEAGWFYYQSSFYYFSNETKSWTESRRYCRDKRADLIIINNKQEQDFIMKITCNNEFWIGLTDIKKEGTWKWVDGSILTSGFWASSGSINEPNGGKTENCAVTHLKKHPELIGWLDVTCDDAHQWIFIVLSVFIYTNNKNCAKDRRQLVTNISNLTGAKDELTNLLMERDQLIKQLQIFGQEAVWFYYQSSFYYLSNETKSWTESRRCCKDRGADLIIVNNKQEQDFIMKITGNNEFWIGLTDSDEEGNWKWVDGSILTSGFWASSGSITEPNGRETENCAVTHLKKHPELKGWLDVACDDAHQWICEKSILPVTI"

ORIGIN      

tcaaaacagtttccagctatgagagcagaaatgtctgaggatatttataacaatgtgatcaagactgagtctgagagaatgaacagagagcgagtggagatggcagtggttatctatgagagtacagactgtgtgagagattatgacttcaggacagagtcaaacacacaacaaccaattcaaaatacaggaagtgattcagtgaagacgagattctccagagcagctccggtgtgtttggtgctgttgtgtttccttctgctgactgcagtcatagtgctgagtgtcttcatctatacaaacaacacaaactacactgaagagagacgccagctaataactaacatcaccaacctcacaggagccaaagacgagctgacaaaccttctatatgacaaagaccaactaataaagtggcttcagatttttggtcaagaagctggatggttttactatcaatccagtttttactacttttccaatgagacaaaaagctggactgagagcagaagatactgtagagacaaaagagcagacctgatcatcataaacaacaaacaggaacaagactttattatgaagatcacttgtaacaatgaattctggattggtctgactgacattaaaaaagagggcacttggaaatgggttgatggcagtatactgacctctgggttctgggcttcctctggatcaataaatgagcccaatggagggaaaacagagaactgtgctgtgacccatttaaaaaagcaccctgagttaataggatggcttgatgttacatgtgatgatgctcatcaatggatcttcatagtgctgagtgtcttcatctatacaaacaacaaaaactgtgctaaagataggcgccagctagtaaccaacatcagcaacctcacaggagccaaagatgagctaacaaaccttctgatggaaagagaccaactaataaagcaacttcagatttttggtcaagaagctgtatggttttactatcaatccagtttttactacttgtccaatgaaacaaagagctggactgagagcagaagatgctgtaaagacagaggagcagatctgatcatcgtaaacaacaaacaggaacaagattttattatgaagatcactggtaacaatgaattctggattggtctgactgacagtgatgaagaaggaaattggaaatgggttgatggcagtatactgacctctgggttctgggcttcctctggatcaataactgagcccaatggacgagaaacagagaactgtgctgtgacccatttaaaaaagcaccctgagttaaagggatggcttgatgttgcatgtgatgatgctcatcaatggatctgtgagaagtccattttaccagttaccatttaa

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