LOCUS       XM_021477335            1459 bp    mRNA    linear   VRT 15-JUN-2017
DEFINITION  PREDICTED: Danio rerio nuclear factor 1 X-type-like (LOC110437879),
            transcript variant X3, mRNA.
ACCESSION   XM_021477335
VERSION     XM_021477335.1
DBLINK      BioProject: PRJNA13922
KEYWORDS    RefSeq.
SOURCE      Danio rerio (zebrafish)
  ORGANISM  Danio rerio
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Ostariophysi;
            Cypriniformes; Danionidae; Danioninae; Danio.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_007112.7) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Version          :: Danio rerio Annotation Release 106
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 7.4
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1459
                     /organism="Danio rerio"
                     /mol_type="mRNA"
                     /strain="Tuebingen"
                     /db_xref="taxon:7955"
                     /chromosome="1"
     gene            1..1459
                     /gene="LOC110437879"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 7 Proteins, and 100% coverage of
                     the annotated genomic feature by RNAseq alignments,
                     including 80 samples with support for all annotated
                     introns"
                     /db_xref="GeneID:110437879"
     CDS             276..866
                     /gene="LOC110437879"
                     /codon_start=1
                     /product="nuclear factor 1 X-type-like isoform X3"
                     /protein_id="XP_021333010.1"
                     /db_xref="GeneID:110437879"
                     /translation="

MDEFHPFIEALLPHVRAFSYTWFNLQARKRKYFKKHEKRMSKDEERAVKDELLGEKPEIKQKWASRLLAKLRKDIRPEFREDFVLTITGKKAPCCVLSNPDQKGKIRRIDCLRQADKVWRLDLVMVILFKGSPLESTDGERLVKSPQCSNHSLCVQPHHIGVSVKELDLYLAYFVHMPGQWVTLSFFPPTATDMLI"

     misc_feature    279..389
                     /gene="LOC110437879"
                     /note="Nuclear factor I protein pre-N-terminus; Region:
                     NfI_DNAbd_pre-N; pfam10524"
                     /db_xref="CDD:463134"
     misc_feature    453..767
                     /gene="LOC110437879"
                     /note="MH1 domain; Region: MH1; pfam03165"
                     /db_xref="CDD:460833"
ORIGIN      

ttttcttttttatgtattaaatatttctctctagcatttcttgtttttctatatccaaagcaatatcacaatttggcttctccaagatattctcaaaatcaaactggactttttttatcacaaatttttgaactttttgtcacaacaacgaaaaccttcagcgactttgtttactatcaatcgtggcatgtagtgtcaaactgagcacggagaagacattttactggtttttcctctcttgtatcggccggcagggtttatgatgaaagtgcagaatggatgaattccaccccttcatcgaggctctcctcccgcacgtgcgggcgttctcctacacctggttcaacctgcaggcccgtaagcgcaagtactttaagaagcacgagaagcgcatgtccaaggatgaggagcgcgccgtcaaagacgaactcctgggcgagaagcccgagatcaagcagaagtgggcgtcgaggctgctggccaaactgcgcaaggacatccggccggagtttcgcgaagacttcgtgctcaccatcacggggaagaaggcaccgtgctgcgtgctctccaacccggatcagaagggtaagatccggcgcatcgactgcctgcggcaggccgacaaagtctggcgcctggacctggtgatggtgatcctgttcaagggaagcccgctggagagcacagacggagagaggctggtcaagtccccgcagtgctccaaccacagcctgtgcgtgcagccgcatcacatcggagtgtctgtcaaggagctggacctgtacctggcctacttcgtccacatgccaggtcagtgggttacactctctttcttccctcctactgctactgatatgttgatttaagagcggccagaatctagagtaaggcgacaccgccgtaatcgccgtcacatccagcacacttactgtataaacacttgcttccagtgtgtgtgagagtgtgtgtgtgtgtgtgtgttctactgccagagctgaaatcaacctgaaaacaggctttatattaaaataaggggaatttatttctgtttattattattggtttattatttattatgtcttttagttttgcttctagttaggaagaaatgctgttgagctgctgtcagatctcatgttgactttttggaaatgtttttacattcaatcaagatcattttaacattgtgaattagattcttttcttgtaaaaggtaaacatttgacatggctttagatatcatgcatgtattttgttatctggttatgctcttctgtttggaagaaatcccctcaaactgtattgaattttcaggctgaatttgggtgggacgaataattaaaatcatttcaacattattaattggcagcaacaaagaaagtcatttaaaaaatcctgcaaattggtgtatctcatttataagccatctgcttcttaattggaagaaatcctatcaaac

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