2024-11-01 12:38:17, GGRNA.v2 : RefSeq release 226 (Sep, 2024)
LOCUS XM_021471218 631 bp mRNA linear VRT 15-JUN-2017 DEFINITION PREDICTED: Danio rerio si:dkey-27h10.2 (si:dkey-27h10.2), transcript variant X4, mRNA. ACCESSION XM_021471218 VERSION XM_021471218.1 DBLINK BioProject: PRJNA13922 KEYWORDS RefSeq; includes ab initio. SOURCE Danio rerio (zebrafish) ORGANISM Danio rerio Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_018394497.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## ##RefSeq-Attributes-START## ab initio :: 4% of CDS bases ##RefSeq-Attributes-END## FEATURES Location/Qualifiers source 1..631 /organism="Danio rerio" /mol_type="mRNA" /strain="Tuebingen" /db_xref="taxon:7955" /chromosome="1" /map="unlocalized" gene 1..631 /gene="si:dkey-27h10.2" /note="Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 96% coverage of the annotated genomic feature by RNAseq alignments" /db_xref="GeneID:100150349" /db_xref="ZFIN:ZDB-GENE-090313-296" CDS 1..510 /gene="si:dkey-27h10.2" /codon_start=1 /product="uncharacterized protein si:dkey-27h10.2 isoform X4" /protein_id="XP_021326893.1" /db_xref="GeneID:100150349" /db_xref="ZFIN:ZDB-GENE-090313-296" /translation="
MYPNIIILVIAVLCITGVVVYCCLQKNSRKYSVDLHPKKEDAQIPLSTVDAEVFDTTSEKDLQTFAPVEPVKDPDIGKEAEKPEEGKEIPDVKQENQQNLSTPEATVIPNDKKDELTVVDLTDAEPAISTKTSMESLDDTLNENNSNNTRIEGIANGYEFIEIFLDGPL"
ORIGIN
atgtatcctaacataattattctggtcattgctgttctgtgcatcactggagtagtagtttactgctgccttcaaaagaactccaggaagtattctgtcgacttgcaccctaaaaaagaagatgctcagattccactcagcacagtggatgcagaagtgtttgacaccacgtcagaaaaagatttgcaaacatttgctccagttgagccagtaaaggaccctgacattgggaaggaagctgaaaagcctgaggaaggaaaagaaatacctgatgttaaacaagaaaaccaacagaatttgtccacccctgaggccacagtgattccaaatgacaaaaaagatgaactgactgtagtggatctgactgatgcagaaccagcgatctcaaccaaaacctcaatggaatcactagatgatactcttaatgaaaacaacagcaacaacacaagaattgaaggcattgccaatgggtatgaattcattgagatctttcttgatggtccactctaaaataaatcagctccttcccaacattttacaatgatctttgaacctgattgatggatttttgactctgcaacatggaaaacaacttcttcatttttacctgtgtgtaagtctacttttcaga
//
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@meso_cacase at
DBCLS
This page is licensed under a
Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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