LOCUS       XM_021467484            2972 bp    mRNA    linear   VRT 15-JUN-2017
DEFINITION  PREDICTED: Danio rerio claudin 20 (cldn20), transcript variant X2,
            mRNA.
ACCESSION   XM_021467484
VERSION     XM_021467484.1
DBLINK      BioProject: PRJNA13922
KEYWORDS    RefSeq.
SOURCE      Danio rerio (zebrafish)
  ORGANISM  Danio rerio
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Ostariophysi;
            Cypriniformes; Danionidae; Danioninae; Danio.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_007128.7) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Version          :: Danio rerio Annotation Release 106
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 7.4
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2972
                     /organism="Danio rerio"
                     /mol_type="mRNA"
                     /strain="Tuebingen"
                     /db_xref="taxon:7955"
                     /chromosome="17"
     gene            1..2972
                     /gene="cldn20"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 9 Proteins, and 100% coverage of
                     the annotated genomic feature by RNAseq alignments,
                     including 18 samples with support for all annotated
                     introns"
                     /db_xref="GeneID:101886267"
     CDS             355..1086
                     /gene="cldn20"
                     /codon_start=1
                     /product="claudin-20"
                     /protein_id="XP_021323159.1"
                     /db_xref="GeneID:101886267"
                     /translation="

MASTGTQIFAFVLALLGILGATVATLLPNWKVSADVGSNIITAISQMQGLWMDCTWYSTGMFSCTLKYSVLALPAYLQTARTTMVLSCVLAALGLCLASLGLKCTRWGGGRRAKRHAAMAAGTCFLASGFLCLVPASWYTNEVIVSFLDANVPESNKFEPGGAVYVAFISSGFLFVGGSIFCLSCSGKRHGPQDLILLPPDKLLLQQQQQLLQQQQQQDQLQHQYCSLSPLDNKTGYSLQDYV"

     misc_feature    364..897
                     /gene="cldn20"
                     /note="PMP-22/EMP/MP20/Claudin family; Region:
                     PMP22_Claudin; cl21598"
                     /db_xref="CDD:473919"
ORIGIN      

acaccgcggggagatgagatgcaaacacacagacaacagtcagacctggagacctgattcgagagctactcctactccagtgagggggagatacggagcggggaatagtgcgagagggatgtacacgtgaaggaaaaacagcggagggtggggagacgagacgctgagtgacgccgcacgatgacaagcaggttgctacagtaacacctgtttgaaggagcaacaaaacaagcctcttcaaatgtgaattgcaggcggcggtgctgaggagtctctgccattgcagttgcagccgaaggagaggggactaggcaagcctgtgtgaatgttggccgggcgaagaaacgtggcaggatggcgtccacgggcacgcagatcttcgcctttgtgctggcattgctcggcattctaggtgccaccgtggccacgttactgcccaactggaaggtgagcgcggacgtgggttcgaacatcatcactgccatctcgcagatgcaggggctgtggatggactgcacctggtacagcactggcatgttcagctgtacactgaagtactctgtgctggcactgcccgcatacctgcagacggcacgcaccactatggttctttcctgtgtgttggcagccctgggattgtgtttggcctctctgggtttgaagtgcacccgctggggtggaggacggcgtgctaaacgccacgctgctatggcagcgggcacctgctttctggcctctggcttcctctgcctcgttcccgcttcttggtacacaaacgaggttattgttagcttccttgacgccaatgtgcccgaaagcaacaagttcgagccagggggcgcagtctacgtagccttcatctcgtctggtttcctgttcgtgggtgggtccattttctgtctgtcctgttcaggcaagcggcacggccctcaggatttgatacttctccctcctgacaaactccttttgcagcagcaacagcaactgctgcagcagcagcagcagcaggatcagctccagcaccagtactgctctctctcgccgctggataacaagactggctacagtctgcaggactacgtctagagtgcaaacagttcaggtgcgagacaagcgcaatgcactgccactcaacctcttggctctcgtgattacaacatgaaagggcaggagggactgcaactttcaaacctttcggtctctttcctttttaagatcaggaagcacaaacgggagatgtatttccctgaagcaatgtcttggaacagacggattgtgaataccgaggtagcagaaacgctgcagtagcgacagcgaaagtggtgtgaagtactgagcgagataaatacatgcacatatccagcatcctattaaaccttattaaagcgttcctctgggaactaattagcaacaagggaatgtttctgctgtttcgaatcccccccgtcccccccttcccaaagatctacgaagcaatcgtttagctgctaacaatcgtttgataacctctgtttaacgtaagatggcaatatgtctctaagaggcaatggtatgggagagcccttgtttgggaggttctttgctccccccccccccctcaccccctcctacttgagtaatggttgtgttaatgaaacctcttgtcttattttggtagctgatagactgacatgattgatattctgcctaagcatgctttctggagcctgtgcataatgcagtggaatgcctgaattgtagccatatagcctgtgcctaaagagctctagtacataaaccgcccaaactgtttggagagaagtgggaggagcgagtgagtagggatggccggggaaatccataaaggctgagaggagactgccccttcatatgtccaacgaaacaacactttcagatttcagactagacaacagaaagcagtcttcagctcagggcatgccgttcgctccattcgcaccaacgcttatactgtgctgcatgtgtgcttttattcacgctcccactcactgccatggaaacgggattcgacacccagatgcgtgtattgtgtagaggtcgtacctctctgcctactctgaggatggcggtcctatctaggatgggctggaggctgtcatgaatcactccagccaacagctgaggattggtgtctggggacaaagcctcagtcactaacttgctgactaactcaatcgataattgcattaacaatatttttagttggctaaatttgaatgaaactgtgtgctaacgcccactctcacagcaaattcggctttttcagagtaatgtttctttctctccaaatttaaacatttgcctctaaatgcattagcagatcgtcacctacaagagtctcctttatttaatatttaataaatatcacaaggttattcttagcgtttacagacatcatctgccaatttcaagagcgagagcgacagattagcaccattaaacccattttgagcccattcacaccaagcagagtaactataaacaatactaacaataaatattaacctctaataagcggcagatgctttcagtgtgcaactagagcgtctgaccagtgactcttttatttaaatgtattaaattaaactaatttaacaaactattttaatcccagcatttctaaaggattcatctgaactggacacatgagatactttaatttatatatcaatcaatttgctagcctggcttgcatatatatatatatattgatatttttatcattctttctcatgatataaccaattgttttctagatggtcattatctttaaatcatcttggtaatactttataataactacacaccatgaatcatctattaagcaatagcacatagttaattcattatctgttatgtattaactctacaatagtagatgttagtaagtttataactgcagatgctctattcttgacttaaaggcagatatacagttgaagtcagaattatta

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