LOCUS       XM_005156170            4154 bp    mRNA    linear   VRT 08-SEP-2024
DEFINITION  PREDICTED: Danio rerio shisa family member 8b (shisa8b), mRNA.
ACCESSION   XM_005156170
VERSION     XM_005156170.5
DBLINK      BioProject: PRJNA13922
KEYWORDS    RefSeq.
SOURCE      Danio rerio (zebrafish)
  ORGANISM  Danio rerio
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Ostariophysi;
            Cypriniformes; Danionidae; Danioninae; Danio.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_018395301.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Sep 8, 2024 this sequence version replaced XM_005156170.4.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_000002035.6-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/15/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4154
                     /organism="Danio rerio"
                     /mol_type="mRNA"
                     /strain="Tuebingen"
                     /db_xref="taxon:7955"
                     /chromosome="12"
                     /map="unlocalized"
     gene            1..4154
                     /gene="shisa8b"
                     /note="shisa family member 8b; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein, and 100% coverage of the annotated genomic
                     feature by RNAseq alignments, including 17 samples with
                     support for all annotated introns"
                     /db_xref="GeneID:101882404"
                     /db_xref="ZFIN:ZDB-GENE-130603-87"
     misc_feature    1
                     /gene="shisa8b"
                     /experiment="COORDINATES: cap analysis [ECO:0007248]"
                     /note="transcription start site"
     CDS             230..1525
                     /gene="shisa8b"
                     /codon_start=1
                     /product="protein shisa-9"
                     /protein_id="XP_005156227.2"
                     /db_xref="GeneID:101882404"
                     /db_xref="ZFIN:ZDB-GENE-130603-87"
                     /translation="

MKILALKKQSMAGNYFLLHLLLTAFLGRAAKAQDETSTDMDIQTANHTVDPLMISVTSDGPPTLTTPGEVEEDTVPSTGTRCRGYYDVMGQWDPPFNCNAGIFLYCCGTCFYRFCCQFRQQRLDQTSCSNYDTPIWANTGKPVATNTEVQPDHERDRTHMIVYIICGVVAIMVLVGIFTKLGLEKSRGGQNDLSNSRTLQELMKQPGGEANAVDGPLSNSSSIGANGISARMLRSRSEQYHLNNAGFSFGAPAGLSHPQSNLSIPGLALNKYNSLKAVADTANRSYYKSYPLMDFSQHHSPPVAFQPMPMHPKDKSYLHQVLPSHDIHSPLSISIPTNHMERTRIPKTITHPQLSSSAFKAWDSGQRHVHRQTSHPGHLPRRQTYSSRRQYSIETIPDFLSQPTGYGGQPLYQHHPKIKAYQTNSKTEVTV"

     misc_feature    473..>850
                     /gene="shisa8b"
                     /note="Wnt and FGF inhibitory regulator; Region: Shisa;
                     pfam13908"
                     /db_xref="CDD:464036"
ORIGIN      

acaaggctcagaggcagcactctgagtggatcgctgtggattaaaacacctgtctgtgggttcaatcattcttaaaaaaggaatttttatggcaaattactgtgactggttgtttacagaggtgaagaggaaggaagttttactactggagagcacaaagaacaagttttgaaccacatggggaaaacaaaataacgcatttctggacaggaccagagtaagacaacaaatgaagattttagctctcaaaaaacaaagcatggctggaaattattttttactacatcttcttctcactgcctttctgggacgagctgctaaagcacaggacgagacttcaactgacatggacatccaaacagccaatcataccgtagaccctttgatgatctctgtgacatcagatggacctccaactttgaccacacctggagaggtggaggaggacaccgtcccatccactggcacccgttgccgtggttactatgatgtcatgggccaatgggaccccccttttaattgtaacgctggtatcttcttgtactgttgcggcacctgtttctaccggttctgctgccagttccgtcaacagcgactggatcagacctcctgctccaactatgatactccaatttgggcaaatactggaaaacctgtggccaccaacactgaggtgcagccagaccacgagcgggatcgaactcatatgattgtatacattatctgtggtgtggtggccatcatggtcctggtgggcatcttcaccaaactgggtctggagaagagccgtggaggtcagaatgacctaagtaactccaggactctccaggagttaatgaagcagccaggtggagaggcgaatgctgtggatggacctctgagcaacagctcctctattggagcaaatggcatctctgccaggatgcttcgcagccgcagtgagcagtaccatctaaacaacgctggcttttcttttggtgcaccggctggactctctcatcctcaaagcaacctcagcataccaggccttgcactcaacaaatacaactctctgaaagcagttgctgacactgcaaaccggagctactacaagagttatccactgatggacttctcccagcatcattcccctcctgtagctttccagccaatgccgatgcacccaaaagacaagtcctaccttcaccaggtcctcccttcccatgacattcactctcctctttccatctcgatcccaaccaaccatatggagaggacccgcatccctaaaaccatcacccaccctcaactgtccagctcggcctttaaagcttgggattctgggcaaagacacgtccaccggcagacctcacatccagggcacctgccgcgacgacaaacctacagcagcagaagacagtacagcatagaaacaataccagatttcctttcccagcctacaggctatgggggacaaccactgtatcagcaccatcccaaaattaaggcctaccagaccaacagcaaaacagaggtcacagtttgaggactcagataactgtatgcaccaacaataccatgtccagaaagtgtggttgttcttactgtcattgctaaaccacttttttctaagtttcttgttttttttctgtgtcccacttttctgggttcatctaaggcctttgtgacgctgacaacaatgaggtgagctttcagaccggaacggaagaatggcacctgaggtcacattaaattaaataggacaacaccatcaacacatcagcctaaatctaattatcctggccatttttatgtaaacacaacctcaggatcaattatgtgaagtacgaagagacagaatgcaacacctagacatctagtcggtgaggcagtggcggggtaggtagtgctgtcgcctcacagcaagaaggttgctgagtgctggttcgaacctcggctcatttggcgtttctgtgtggagtttgcatgttctccctgccttcgcgtgagtttcctctgggtgctccggtacaggatgtggtacaggtgaattaggtaagctaaattgtccgtagtgtatgagtgtgtgtgtgtgcgtgtgtggatgtttcgcagagatgggttgcggctggaagtgcatctgctgtgtaaaaacttgctggatgagttggtggttcattccgctgtggcgaccccggattaataaagggactaagccgacaagaatatgaatgaatgagtgagacatctagtcttgcactaggattcaagctttgctaagagtgctgaggttttttggggtgaaaacaaattaaagggtctttcacactggtttgggcagtctcattttaagaaagttcccattaaataactcatttgttttaagaaaatgaggacaaagtacacggcataataatccagtaagggttacaatcacctttgtgcaaccatgagccagtaataatgaggcaaacttgacaataaatctgataaagcaccataagatgctaaacggacattcctaaaatgctataaactgtcttgatacatttctttttacatttgttttgggacaaaaaaagcaaagtcggattggattgggaaaatactgcaaactgggaatcactggaagtaacctaaagcacagctacacaacatgccataaattgttgcacacatggctttcagatccttcctcaatgtacttctgtgaaaatataagcgaaaaaggtcttgttttatgggttttgatggttctcatttaaatctcatatgcagaggacatcaattgtacacctttttatttaaagctcttgtttgcttaagagtctgatctcctctgtttgtcaagactgcgtgtggagtcctagctgtcaagttttacaaattgttgaccaaggatgatttcctcatgacgtgaggctgaagaaatgacgccagcagctttgtgcaataatctggtcattggaagtgggaatgaaacacataactcttataaaataacctatgcaatggcaaaaatatcagctctagcaaattaatcatccttgatgtcaagatcacacaaggtctctcattgcattatgtaccttttacttgtctgtctttccttttccttggataaatggagagtaaatttccagacatgttatgtatttaaatagacgcacaagatcaaaccatctgctgtaggatcaggagattcagatacacagggtagcaggattgggaaatctaaaatgctttaaaggggaaatcattgttacaccactttacacacatacagtatactgttacttgtttatctgttgcataaaagcaatatcacacttacattcgtgctgtgacattgaatatcagcagagttgtgaggccttgtgcttacattcagaccaacagcatacttgctatagtgtgatatttcttaaacgtttgtagtattgaaaatgtgcgtaaaaatgtgcttccttattagttcctgtactgcgttgtgctttgcttttattcaaccctgatattcatatgaacttgacaacctttctgttttattatatttatattacgcatatgaattatatttctgtgttcatgtacataaagttatttaagaattatataagagtctgatttaataattacacagatgctgtgttcagaaatgttttaagatgtcttaaatacgagtgtttgtacgttggtaatgcctgcagtattgtggaaaaacagtgatattcataaactagttgtataagggcttttggcaacaatttgaagaactgaaaattactcaaatttattttgataaaatatattttatattcacattttggctaaataaaagattacaaaaaaaaaactaaacttgttgtaaaacaaatgaaatcgacgtttaacgagttttcacatgtggatttgtacctcaaatgtatgtcacttttcaaaataaaagttctcaaacgtcgaaatgctgtgtattttatacattttacatttttaatatgtaggtaatttccaacaaactacttaccagacagctgggttatgaaagaagcttatatcgtatcactttaatatttacagcgcatgccaatttctggcctgaagaactctagcgccatctgatggtcaccaataacagaaacagcacagagattttaccaacttatatttttgtc

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