LOCUS       NM_001386537            1213 bp    mRNA    linear   VRT 28-SEP-2020
DEFINITION  Danio rerio si:ch211-40k21.5 (si:ch211-40k21.5), transcript variant
            1, mRNA.
ACCESSION   NM_001386537 XM_002666694
VERSION     NM_001386537.1
KEYWORDS    RefSeq.
SOURCE      Danio rerio (zebrafish)
  ORGANISM  Danio rerio
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Ostariophysi;
            Cypriniformes; Danionidae; Danioninae; Danio.
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            FP089511.13.
            
            On Aug 29, 2020 this sequence version replaced XM_002666694.6.
            
            ##Evidence-Data-START##
            Transcript exon combination :: GFIL01006735.1, EH540870.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA2168447, SAMEA4476810
                                           [ECO:0000348]
            ##Evidence-Data-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-391               FP089511.13        102688-103078
            392-503             FP089511.13        106840-106951
            504-629             FP089511.13        107048-107173
            630-776             FP089511.13        108791-108937
            777-1213            FP089511.13        111847-112283
FEATURES             Location/Qualifiers
     source          1..1213
                     /organism="Danio rerio"
                     /mol_type="mRNA"
                     /strain="Tuebingen"
                     /db_xref="taxon:7955"
                     /chromosome="24"
                     /map="24"
     gene            1..1213
                     /gene="si:ch211-40k21.5"
                     /note="si:ch211-40k21.5"
                     /db_xref="GeneID:100332117"
                     /db_xref="ZFIN:ZDB-GENE-131121-368"
     exon            1..391
                     /gene="si:ch211-40k21.5"
                     /inference="alignment:Splign:2.1.0"
     misc_feature    153..155
                     /gene="si:ch211-40k21.5"
                     /note="upstream in-frame stop codon"
     CDS             183..1058
                     /gene="si:ch211-40k21.5"
                     /note="isoform 1 is encoded by transcript variant 1"
                     /codon_start=1
                     /product="uncharacterized protein LOC100332117 isoform 1"
                     /protein_id="NP_001373466.1"
                     /db_xref="GeneID:100332117"
                     /db_xref="ZFIN:ZDB-GENE-131121-368"
                     /translation="

MMDHGYALAARMEQIMPIRRNYTNGIRRQRDGEKQINRVNIGIAYSKWKALKEKKGFRNDADVACYLLDRAFSELSEDRSSISSISPISIPPRRQPQKSIRPALQSEATWTDSLSSDQLSDSETLPGPDSKSAKVEVLEFGYEHPPYQTIKQEEPEQQLEDESGVDIMIASTAQSYGFVPHCSSSTDEENEMQWDEIKDELAETAQRLEERLEAMRSLSVRAPKPMSVTKEKDKEVKWTNKSSLKTLFRTCHQCGESVLEFKTLTSGSLSWIQWECSKGHLMCLFHNYNTT"

     exon            392..503
                     /gene="si:ch211-40k21.5"
                     /inference="alignment:Splign:2.1.0"
     exon            504..629
                     /gene="si:ch211-40k21.5"
                     /inference="alignment:Splign:2.1.0"
     exon            630..776
                     /gene="si:ch211-40k21.5"
                     /inference="alignment:Splign:2.1.0"
     exon            777..1213
                     /gene="si:ch211-40k21.5"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      

tttgggatcacgtgaccaaacgagtcttactcattggctgacgttgaaacccttcatgggcgaaacggcaaactctataaaccgacaatgactgcttatttgtttagttgtttaacgggttttctgggatattaacgacagaatcatcgcgttaaagtacctctgcaaggtgttgtgaaggaatgatggaccacggttatgcattagccgcaagaatggaacagattatgccgataagaagaaattacactaacgggataagacgacagagagacggagagaagcagataaacagagtaaacatcgggatagcttattcaaaatggaaagctcttaaggagaagaaaggctttaggaatgacgcggatgttgcttgttatctgctggacagggcatttagtgaactttcagaagaccgatccagcatttcttcaatctctccaatctccattcctcccagaagacaacctcagaaatcaataaggcctgcactgcaatctgaggcaacatggactgattcactcagttcggaccagctgtcagactctgaaactctgcctggtcctgattccaaatctgcaaaggttgaagttctcgagttcggctacgagcatcctccatatcagacaattaagcaagaagagcctgaacaacaattggaggatgaatctggtgtggatatcatgattgcttctactgcacagtcgtatggttttgttcctcattgttcatcatctacagatgaagaaaacgaaatgcaatgggatgaaataaaggatgaattagcggagactgcacagcgactggaagagcgcttggaagcaatgaggtcattgtcagtccgcgcaccaaaacccatgtcagtgaccaaagaaaaagataaggaagtaaaatggaccaacaaatccagtttgaagacgctattcaggacctgccatcagtgtggagagtcggtactggagtttaagacgttaacatcagggagcctcagctggattcagtgggaatgttcaaaaggacacctcatgtgcctcttccacaactataacaccacgtaacactcaatccagaaagaatcaagcaactgcacactatgtatataggtttagcacattgtgaataacggatgatcagttttactttgcaataaatgatctctttattggtgtaagggaggtttgggatgttctataattaaaaatctttcagttca

//