2024-11-01 12:32:39, GGRNA.v2 : RefSeq release 226 (Sep, 2024)
LOCUS NM_001190307 1176 bp mRNA linear VRT 16-OCT-2021 DEFINITION Danio rerio potassium channel, subfamily K, member 18 (kcnk18), mRNA. ACCESSION NM_001190307 XR_084393 VERSION NM_001190307.2 KEYWORDS RefSeq. SOURCE Danio rerio (zebrafish) ORGANISM Danio rerio Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio. REFERENCE 1 (bases 1 to 1176) AUTHORS Rahm AK, Wiedmann F, Gierten J, Schmidt C, Schweizer PA, Becker R, Katus HA and Thomas D. TITLE Functional characterization of zebrafish K2P18.1 (TRESK) two-pore-domain K+ channels JOURNAL Naunyn Schmiedebergs Arch Pharmacol 387 (3), 291-300 (2014) PUBMED 24311292 REFERENCE 2 (bases 1 to 1176) AUTHORS Gierten J, Hassel D, Schweizer PA, Becker R, Katus HA and Thomas D. TITLE Identification and functional characterization of zebrafish K(2P)10.1 (TREK2) two-pore-domain K(+) channels JOURNAL Biochim Biophys Acta 1818 (1), 33-41 (2012) PUBMED 21963410 REFERENCE 3 (bases 1 to 1176) AUTHORS Enyedi P and Czirjak G. TITLE Molecular background of leak K+ currents: two-pore domain potassium channels JOURNAL Physiol Rev 90 (2), 559-605 (2010) PUBMED 20393194 REMARK Review article COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from GQ304739.2. On Nov 14, 2011 this sequence version replaced NM_001190307.1. ##Evidence-Data-START## Transcript exon combination :: GQ304739.2, CK687289.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA2168447, SAMEA2168448 [ECO:0000348] ##Evidence-Data-END## FEATURES Location/Qualifiers source 1..1176 /organism="Danio rerio" /mol_type="mRNA" /db_xref="taxon:7955" /chromosome="17" /map="17" gene 1..1176 /gene="kcnk18" /note="potassium channel, subfamily K, member 18" /db_xref="GeneID:561821" /db_xref="ZFIN:ZDB-GENE-100405-2" CDS 1..1176 /gene="kcnk18" /note="two-pore-domain potassium channel TRESK; K2P18.1" /codon_start=1 /product="potassium channel subfamily K member 18" /protein_id="NP_001177236.2" /db_xref="GeneID:561821" /db_xref="ZFIN:ZDB-GENE-100405-2" /translation="
MSVSQKRQFTGRCSTLFWRLFPHVFLILSLVLYAVLGALVFRAIEYTNPRNESEEILSIVQKVMEIVQNHTDASEQKHLINKAKYILDDYCYEKERDHGWTFFASLFFCCTVFTTVGYGRIYPLTSKGKVACVLYAMVGIPLMLLVISDVGDLLAVLLSKAYTRLNLFFRRWIGHQSWRLQSHEKTSALPQAQADTDGTYKFNQDVVVLETTNNQQVIQTRSSIRRGSFQLRNNKEIFDRIIVRESFRIKGTLSKSCSCPELDRVPTPKDELFNDIGQEMEQLDVPLLVILLMVFAYMVICSQILKCWEKQMDHSDAFYFTFITLTTIGFGDIVPEHPKFFMVTFLFIITGMAIMSMAFKLGQSQIVCFYRRCIKSLSMGKVRIHNDLNNN"
misc_feature <298..462 /gene="kcnk18" /note="Ion channel; Region: Ion_trans_2; pfam07885" /db_xref="CDD:462301" misc_feature 865..1101 /gene="kcnk18" /note="Ion channel; Region: Ion_trans_2; pfam07885" /db_xref="CDD:462301" exon 1..214 /gene="kcnk18" /inference="alignment:Splign:2.1.0" exon 215..349 /gene="kcnk18" /inference="alignment:Splign:2.1.0" exon 350..1176 /gene="kcnk18" /inference="alignment:Splign:2.1.0" ORIGIN
atgtccgtgtcacaaaagagacagtttacggggagatgctcgacactcttctggcgtttgtttcctcatgttttcctaattttatcactcgttttatacgcggttttaggagcgcttgtcttcagagcgattgagtacacgaatcctcgaaatgagtcggaggagatcctgtccattgtgcaaaaagtgatggagatcgttcagaatcacacagacgcctcagagcagaagcacctaatcaataaagcaaaatacattttggatgattactgttatgagaaggaacgtgatcacggatggaccttctttgcttcacttttcttctgctgtacagtgttcactactgtaggttatggacgaatttatccgttgacaagtaaagggaaagtggcatgtgtcctgtatgcgatggtgggcatccctctgatgctgctggtcatctcggatgtgggtgatctcttagctgttctcctctccaaagcatatactcgccttaacctgttcttcagacgatggataggacatcagtcatggagacttcagagccacgaaaagacatcagctcttccacaagctcaagctgatactgacggcacctataagttcaatcaggatgtcgtggtgctcgagacaacaaacaatcaacaggtgatacaaactaggtcttccatcaggcgcgggtcctttcagctccgtaacaacaaagagatctttgaccgcattattgtaagggagagcttcaggatcaaaggaactctctcaaaatcctgttcatgcccagaactggaccgtgtgccaaccccaaaagatgagttattcaacgacatcggacaggagatggagcagttggacgtccctctgctggtcatcttgctgatggtgtttgcctacatggtgatctgcagtcagattctgaaatgctgggagaagcagatggaccattctgatgccttttatttcaccttcatcaccctaaccaccattggctttggcgacattgtgcccgaacacccaaaattcttcatggttacttttttgttcatcatcacaggcatggccattatgagtatggcctttaaacttggccaatcgcaaattgtttgcttttacaggcggtgtataaagagtctaagcatgggcaaggtaagaattcacaatgacttaaacaacaactga
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Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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