LOCUS       NM_001045383            1029 bp    mRNA    linear   VRT 28-DEC-2020
DEFINITION  Danio rerio claudin 33b (cldn33b), mRNA.
ACCESSION   NM_001045383
VERSION     NM_001045383.1
KEYWORDS    RefSeq.
SOURCE      Danio rerio (zebrafish)
  ORGANISM  Danio rerio
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Ostariophysi;
            Cypriniformes; Danionidae; Danioninae; Danio.
REFERENCE   1  (bases 1 to 1029)
  AUTHORS   Pasquier J, Cabau C, Nguyen T, Jouanno E, Severac D, Braasch I,
            Journot L, Pontarotti P, Klopp C, Postlethwait JH, Guiguen Y and
            Bobe J.
  TITLE     Gene evolution and gene expression after whole genome duplication
            in fish: the PhyloFish database
  JOURNAL   BMC Genomics 17, 368 (2016)
   PUBMED   27189481
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1029)
  AUTHORS   Baltzegar DA, Reading BJ, Brune ES and Borski RJ.
  TITLE     Phylogenetic revision of the claudin gene family
  JOURNAL   Mar Genomics 11, 17-26 (2013)
   PUBMED   23726886
COMMENT     PREDICTED REFSEQ: This record has not been reviewed and the
            function is unknown. The reference sequence was derived from
            BC122231.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC122231.1 [ECO:0000332]
            ##Evidence-Data-END##
FEATURES             Location/Qualifiers
     source          1..1029
                     /organism="Danio rerio"
                     /mol_type="mRNA"
                     /db_xref="taxon:7955"
                     /chromosome="6"
                     /map="6"
     gene            1..1029
                     /gene="cldn33b"
                     /gene_synonym="zgc:153311"
                     /note="claudin 33b"
                     /db_xref="GeneID:751666"
                     /db_xref="ZFIN:ZDB-GENE-060825-194"
     exon            1..1007
                     /gene="cldn33b"
                     /gene_synonym="zgc:153311"
                     /inference="alignment:Splign:2.1.0"
     misc_feature    203..205
                     /gene="cldn33b"
                     /gene_synonym="zgc:153311"
                     /note="upstream in-frame stop codon"
     CDS             218..883
                     /gene="cldn33b"
                     /gene_synonym="zgc:153311"
                     /codon_start=1
                     /product="uncharacterized protein LOC751666"
                     /protein_id="NP_001038848.1"
                     /db_xref="GeneID:751666"
                     /db_xref="ZFIN:ZDB-GENE-060825-194"
                     /translation="

MTNPCTVALELFGMLIGAGGWFCSLAATIMPQWLSRSTELFATESFEQGLWEVCVIQEVAGMECRPYDTILGLDPTVMLARILMCMSNATGLLGILLAIPSMSQIKCCKGEEGRKTKRGLKISAAVFLCIAGLLVLTPISYVAHDTVMRYFDESVPHVVPRSEFGDALFIGWSAGLLYIVASVLLFASCTDSGNSEPHLVYHHRRQDTRTLDRSGKRTEYV"

     misc_feature    239..772
                     /gene="cldn33b"
                     /gene_synonym="zgc:153311"
                     /note="PMP-22/EMP/MP20/Claudin family; Region:
                     PMP22_Claudin; cl21598"
                     /db_xref="CDD:473919"
ORIGIN      

agctgatgagtgcctcttactgaagtctgacggactgtaaaggacttgccttgtcagaagaactctgcaagatcacacccgaggtgctgcttttggtctttccacgctttcctcctctatccctcactcatttctcttatcgagaggaggctcttgaagcaccagacaaacctgaaggccgtcggaccccaaggggacacggtagccagaggagaccatgacgaacccttgcacggtggctctggaactctttgggatgctgatcggggcaggaggctggttctgttcactggccgccaccatcatgcctcagtggctgtcacgttcaactgaactgttcgccacagagagctttgaacaagggctttgggaggtctgtgtgatccaggaagtggctggcatggagtgtcgtccctatgacaccatcctaggtcttgaccccacggtgatgctggcacgaattctgatgtgcatgtcgaatgccactgggctcctcgggattctcctcgccatcccttccatgagtcagatcaagtgctgtaagggcgaggagggacgcaagaccaagagagggctgaagatctcagctgccgtgtttttgtgcatcgccggtttgttggttctcactccaatatcttatgttgctcacgatacagtgatgagatacttcgatgagagtgtgcctcatgtggtgccgcgctctgagtttggggatgcgctgttcattggctggtctgcaggacttctttacattgtggcatccgtgctgttgtttgcctcttgcactgactcaggaaacagtgagccgcacttggtgtatcaccatcgaaggcaggataccagaactttggatagatcaggaaaacgcaccgagtacgtttgagacgattctcactgtcttaaaatccctgttgatatttctttttaaagaaattttaaaattcttttaagaacttttaacattcaatcataataaaggactttcttatgatgcatttatccttcaaaaaaaaaaaaaaaaaaaaaaaa

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