LOCUS       XM_026835121             955 bp    mRNA    linear   INV 22-OCT-2018
DEFINITION  PREDICTED: Ciona intestinalis glutamate receptor-interacting
            protein 1-like (LOC108949604), mRNA.
ACCESSION   XM_026835121
VERSION     XM_026835121.1
DBLINK      BioProject: PRJNA187185
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Ciona intestinalis (vase tunicate)
  ORGANISM  Ciona intestinalis
            Eukaryota; Metazoa; Chordata; Tunicata; Ascidiacea; Phlebobranchia;
            Cionidae; Ciona.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_020172.2) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Ciona intestinalis Annotation
                                           Release 104
            Annotation Version          :: 104
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.1
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 4% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..955
                     /organism="Ciona intestinalis"
                     /mol_type="mRNA"
                     /db_xref="taxon:7719"
                     /chromosome="7"
     gene            1..955
                     /gene="LOC108949604"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 1 EST, and 94% coverage of the
                     annotated genomic feature by RNAseq alignments"
                     /db_xref="GeneID:108949604"
     CDS             110..955
                     /gene="LOC108949604"
                     /codon_start=1
                     /product="glutamate receptor-interacting protein 1-like"
                     /protein_id="XP_026690922.1"
                     /db_xref="GeneID:108949604"
                     /translation="

MGSNQSKSNSRKSHSDLYYHHGKLTLKERLSVLKTGSLKRNHQLRKDELTESDLAIYATKKWNSETTLDARTGGNQGPITEEDLQVVPARVEEIPEDERGEATVNLVKVDGVPLGLTVSGGADKDGRPRVSNLRSTGIAARSDQLQVGDIITSVNGIRSTKLKHGEIISLLKNISEKVCLEIEYLLPPTTVQTSTIIQKTTEVFLQKEHGSFGFVLRGGNHGQHCRSRPLVVTHIRPDSPAAREGTLKTGDRIISIGSTPLIGGTLQEVITLEKAKYLWLF"

     misc_feature    413..661
                     /gene="LOC108949604"
                     /note="canonical PDZ domain; Region: PDZ_canonical;
                     cl49608"
                     /db_xref="CDD:483948"
     misc_feature    order(446..466,500..502,509..511,599..601,611..613,
                     620..625)
                     /gene="LOC108949604"
                     /note="peptide binding site [polypeptide binding]; other
                     site"
                     /db_xref="CDD:467153"
     misc_feature    704..925
                     /gene="LOC108949604"
                     /note="canonical PDZ domain; Region: PDZ_canonical;
                     cl49608"
                     /db_xref="CDD:483948"
     misc_feature    order(740..760,806..808,815..817,905..907,917..919)
                     /gene="LOC108949604"
                     /note="peptide binding site [polypeptide binding]; other
                     site"
                     /db_xref="CDD:467153"
ORIGIN      

gccttttattcatatttaccaccatacgtttagtgtatagggcttaatgtatgctgtgtaattgattaaaaatgctataggattactattggtaaccaaccttctaaacatggggagtaaccaaagcaaaagtaacagccgcaagtcccacagtgacttatattaccaccatggtaaacttactttgaaagaaagattgagtgttctaaaaactggttctctaaaacggaaccatcagctccgtaaggatgaacttaccgaatccgaccttgcaatatatgctacaaagaaatggaatagcgaaaccactttagatgcacgcacaggtggtaaccaaggaccaatcacagaagaggatttacaagttgttccagcaagagtggaagaaataccagaggatgaacgtggtgaagccacagtgaacttggttaaagttgatggcgttccacttggactcactgtttctggtggagcggataaagatggccgccctcgtgtgtctaatctacgtagcactggcatcgctgcaaggagtgaccaattacaagttggtgacatcataacttcagtgaatggaattcggtctacgaaactaaaacacggggaaattatcagtttgttgaaaaatatcagcgaaaaagtttgtttggagattgaatatcttctcccacctacaactgtccagacatcaactatcattcaaaagacgacggaggttttcctccagaaagaacacggatcgtttggattcgttctacggggtggtaaccatggccaacactgcaggtcacgacctctggtggttacgcatatacgacccgattcacctgcagcaagagaaggaaccttaaagacgggtgatcgaattatttcaatcgggtcgaccccgctcatcggtggcaccttacaggaagttataacactcgaaaaggcaaaatatttatggctgttttag

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